RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 LMNTD2Q8IXW0 634 aa7.04□□□□□ -1.28
CCNT1-202ENST00000417344 SPATA20Q8TB22 786 aa7.04□□□□□ -1.28
CCNT1-202ENST00000417344 WHAMMQ8TF30 809 aa7.04□□□□□ -1.28
CCNT1-202ENST00000417344 IFT81Q8WYA0 676 aa7.04□□□□□ -1.28
CCNT1-202ENST00000417344 CHMP6Q96FZ7 201 aa7.04□□□□□ -1.28
CCNT1-202ENST00000417344 PURBQ96QR8 312 aaKnown RBP7.04□□□□□ -1.28
CCNT1-202ENST00000417344 UBE2OQ9C0C9 1292 aaKnown RBP7.04□□□□□ -1.28
CCNT1-202ENST00000417344 LACRTQ9GZZ8 138 aa7.04□□□□□ -1.28
CCNT1-202ENST00000417344 ZWILCHQ9H900 591 aa7.04□□□□□ -1.28
CCNT1-202ENST00000417344 RMI1Q9H9A7 625 aa7.04□□□□□ -1.28
CCNT1-202ENST00000417344 PICK1Q9NRD5 415 aa7.04□□□□□ -1.28
CCNT1-202ENST00000417344 SWAP70Q9UH65 585 aa7.04□□□□□ -1.28
CCNT1-202ENST00000417344 SERTAD1Q9UHV2 236 aa7.04□□□□□ -1.28
CCNT1-202ENST00000417344 PHF24Q9UPV7 400 aa7.04□□□□□ -1.28
CCNT1-202ENST00000417344 CEP170BQ9Y4F5 1589 aaPredicted RBP7.04□□□□□ -1.28
CCNT1-202ENST00000417344 MACROD2A1Z1Q3 448 aa7.03□□□□□ -1.28
CCNT1-202ENST00000417344 LRRC10BA6NIK2 292 aa7.03□□□□□ -1.28
CCNT1-202ENST00000417344 E7EWF7 191 aa7.03□□□□□ -1.28
CCNT1-202ENST00000417344 F8W031 263 aaPredicted RBP7.03□□□□□ -1.28
CCNT1-202ENST00000417344 M0R2C6 588 aa7.03□□□□□ -1.28
CCNT1-202ENST00000417344 POLR2DO15514 142 aaKnown RBP7.03□□□□□ -1.28
CCNT1-202ENST00000417344 FOXO3O43524 673 aa7.03□□□□□ -1.28
CCNT1-202ENST00000417344 SASH1O94885 1247 aa7.03□□□□□ -1.28
CCNT1-202ENST00000417344 GLI1P08151 1106 aa7.03□□□□□ -1.28
CCNT1-202ENST00000417344 CCNYL3P0C7X3 344 aa7.03□□□□□ -1.28
CCNT1-202ENST00000417344 CYLC1P35663 651 aaPredicted RBP7.03□□□□□ -1.28
CCNT1-202ENST00000417344 TUBP50607 506 aa7.03□□□□□ -1.28
CCNT1-202ENST00000417344 ALDH5A1P51649 535 aaPredicted RBP7.03□□□□□ -1.28
CCNT1-202ENST00000417344 KCNJ2P63252 427 aa7.03□□□□□ -1.28
CCNT1-202ENST00000417344 ADAM9Q13443 819 aa7.03□□□□□ -1.28
CCNT1-202ENST00000417344 KRT31Q15323 416 aa7.03□□□□□ -1.28
CCNT1-202ENST00000417344 ODF2Q5BJF6 829 aa7.03□□□□□ -1.28
CCNT1-202ENST00000417344 KANK3Q6NY19 840 aa7.03□□□□□ -1.28
CCNT1-202ENST00000417344 CHST3Q7LGC8 479 aa7.03□□□□□ -1.28
CCNT1-202ENST00000417344 WAPLQ7Z5K2 1190 aa7.03□□□□□ -1.28
CCNT1-202ENST00000417344 VPS37DQ86XT2 251 aa7.03□□□□□ -1.28
CCNT1-202ENST00000417344 KIAA0825Q8IV33 1275 aa7.03□□□□□ -1.28
CCNT1-202ENST00000417344 GRAMD1CQ8IYS0 662 aa7.03□□□□□ -1.28
CCNT1-202ENST00000417344 FBXL16Q8N461 479 aa7.03□□□□□ -1.28
CCNT1-202ENST00000417344 SMCR8Q8TEV9 937 aaPredicted RBP7.03□□□□□ -1.28
CCNT1-202ENST00000417344 MAIP1Q8WWC4 291 aa7.03□□□□□ -1.28
CCNT1-202ENST00000417344 PRCCQ92733 491 aaPredicted RBP7.03□□□□□ -1.28
CCNT1-202ENST00000417344 EDC3Q96F86 508 aaKnown RBP7.03□□□□□ -1.28
CCNT1-202ENST00000417344 SLX1AQ9BQ83 275 aa7.03□□□□□ -1.28
CCNT1-202ENST00000417344 SYT15Q9BQS2 421 aa7.03□□□□□ -1.28
CCNT1-202ENST00000417344 MAF1Q9H063 256 aa7.03□□□□□ -1.28
CCNT1-202ENST00000417344 ARHGEF10LQ9HCE6 1279 aa7.03□□□□□ -1.28
CCNT1-202ENST00000417344 PLCB1Q9NQ66 1216 aa7.03□□□□□ -1.28
CCNT1-202ENST00000417344 LIMA1Q9UHB6 759 aaKnown RBP7.03□□□□□ -1.28
CCNT1-202ENST00000417344 NDUFB9Q9Y6M9 179 aa7.03□□□□□ -1.28
CCNT1-202ENST00000417344 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.03□□□□□ -1.28
CCNT1-202ENST00000417344 ZNF609O15014 1411 aa7.03□□□□□ -1.28
CCNT1-202ENST00000417344 EDC4Q6P2E9 1401 aaKnown RBP7.03□□□□□ -1.28
CCNT1-202ENST00000417344 ERCC6L2Q5T890 1561 aa7.03□□□□□ -1.28
CCNT1-202ENST00000417344 ESYT3A0FGR9 886 aa7.03□□□□□ -1.28
CCNT1-202ENST00000417344 CPLX1O14810 134 aa7.03□□□□□ -1.28
CCNT1-202ENST00000417344 CYP27B1O15528 508 aa7.03□□□□□ -1.28
CCNT1-202ENST00000417344 ATP6V1G1O75348 118 aa7.03□□□□□ -1.28
CCNT1-202ENST00000417344 TCP1P17987 556 aaKnown RBP7.03□□□□□ -1.28
CCNT1-202ENST00000417344 HSPA9P38646 679 aaKnown RBP7.03□□□□□ -1.28
CCNT1-202ENST00000417344 PAFAH1B1P43034 410 aa7.03□□□□□ -1.28
CCNT1-202ENST00000417344 POLE2P56282 527 aa7.03□□□□□ -1.28
CCNT1-202ENST00000417344 ATP11AP98196 1134 aa7.03□□□□□ -1.28
CCNT1-202ENST00000417344 GUCY2DQ02846 1103 aa7.03□□□□□ -1.28
CCNT1-202ENST00000417344 TAF7Q15545 349 aaPredicted RBP7.03□□□□□ -1.28
CCNT1-202ENST00000417344 MTHFSDQ2M296 383 aaKnown RBP7.03□□□□□ -1.28
CCNT1-202ENST00000417344 WASHC4Q2M389 1173 aa7.03□□□□□ -1.28
CCNT1-202ENST00000417344 FAM133BQ5BKY9 247 aaKnown RBP7.03□□□□□ -1.28
CCNT1-202ENST00000417344 RUFY4Q6ZNE9 571 aa7.03□□□□□ -1.28
CCNT1-202ENST00000417344 CACNA2D4Q7Z3S7 1137 aa7.03□□□□□ -1.28
CCNT1-202ENST00000417344 APBB1IPQ7Z5R6 666 aaPredicted RBP7.03□□□□□ -1.28
CCNT1-202ENST00000417344 SYCP3Q8IZU3 236 aa7.03□□□□□ -1.28
CCNT1-202ENST00000417344 DNAJC7Q99615 494 aa7.03□□□□□ -1.28
CCNT1-202ENST00000417344 VPS16Q9H269 839 aa7.03□□□□□ -1.28
CCNT1-202ENST00000417344 EPB41L5Q9HCM4 733 aa7.03□□□□□ -1.28
CCNT1-202ENST00000417344 SEC31BQ9NQW1 1179 aa7.03□□□□□ -1.28
CCNT1-202ENST00000417344 RBM12Q9NTZ6 932 aaKnown RBP7.03□□□□□ -1.28
CCNT1-202ENST00000417344 CWC25Q9NXE8 425 aaPredicted RBP7.03□□□□□ -1.28
CCNT1-202ENST00000417344 SMARCAL1Q9NZC9 954 aa7.03□□□□□ -1.28
CCNT1-202ENST00000417344 BIN2Q9UBW5 565 aaPredicted RBP7.03□□□□□ -1.28
CCNT1-202ENST00000417344 AGAP1Q9UPQ3 857 aa7.03□□□□□ -1.28
CCNT1-202ENST00000417344 HYOU1Q9Y4L1 999 aa7.03□□□□□ -1.28
CCNT1-202ENST00000417344 DUSP10Q9Y6W6 482 aa7.03□□□□□ -1.28
CCNT1-202ENST00000417344 AFF2P51816 1311 aa7.02□□□□□ -1.29
CCNT1-202ENST00000417344 TTC26A0AVF1 554 aa7.02□□□□□ -1.29
CCNT1-202ENST00000417344 ASAP2O43150 1006 aa7.02□□□□□ -1.29
CCNT1-202ENST00000417344 TACC1O75410 805 aa7.02□□□□□ -1.29
CCNT1-202ENST00000417344 HEXIM1O94992 359 aaKnown RBP7.02□□□□□ -1.29
CCNT1-202ENST00000417344 F12P00748 615 aaPredicted RBP7.02□□□□□ -1.29
CCNT1-202ENST00000417344 MAGEA10P43363 369 aaPredicted RBP7.02□□□□□ -1.29
CCNT1-202ENST00000417344 PSMC4P43686 418 aa7.02□□□□□ -1.29
CCNT1-202ENST00000417344 COPB1P53618 953 aaKnown RBP7.02□□□□□ -1.29
CCNT1-202ENST00000417344 SPAG1Q07617 926 aa7.02□□□□□ -1.29
CCNT1-202ENST00000417344 KIF5AQ12840 1032 aa7.02□□□□□ -1.29
CCNT1-202ENST00000417344 IMMTQ16891 758 aaKnown RBP7.02□□□□□ -1.29
CCNT1-202ENST00000417344 PABPC1LQ4VXU2 614 aaKnown RBP7.02□□□□□ -1.29
CCNT1-202ENST00000417344 CMPK2Q5EBM0 449 aa7.02□□□□□ -1.29
CCNT1-202ENST00000417344 HDGFL1Q5TGJ6 251 aa7.02□□□□□ -1.29
CCNT1-202ENST00000417344 WDR59Q6PJI9 974 aa7.02□□□□□ -1.29
CCNT1-202ENST00000417344 ARMCX6Q7L4S7 300 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms