RNA–Protein interactions for RNA: ENST00000397081.7

RAPGEF4-201, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAPGEF4, Length 4,299 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-201ENST00000397081 RPS8P62241 208 aaKnown RBP16.23■□□□□ 0.19
RAPGEF4-201ENST00000397081 PLS1Q14651 629 aa16.23■□□□□ 0.19
RAPGEF4-201ENST00000397081 RPS6KA1Q15418 735 aa16.23■□□□□ 0.19
RAPGEF4-201ENST00000397081 UBE2SQ16763 222 aa16.23■□□□□ 0.19
RAPGEF4-201ENST00000397081 TTI2Q6NXR4 508 aa16.23■□□□□ 0.19
RAPGEF4-201ENST00000397081 B4GALNT4Q76KP1 1039 aa16.23■□□□□ 0.19
RAPGEF4-201ENST00000397081 CLEC10AQ8IUN9 316 aa16.23■□□□□ 0.19
RAPGEF4-201ENST00000397081 FNBP4Q8N3X1 1017 aaPredicted RBP16.23■□□□□ 0.19
RAPGEF4-201ENST00000397081 ZNF512BQ96KM6 892 aaPredicted RBP16.23■□□□□ 0.19
RAPGEF4-201ENST00000397081 ABCC6O95255 1503 aa16.23■□□□□ 0.19
RAPGEF4-201ENST00000397081 NR1D1P20393 614 aa16.22■□□□□ 0.19
RAPGEF4-201ENST00000397081 TNNC1P63316 161 aa16.22■□□□□ 0.19
RAPGEF4-201ENST00000397081 ACTN3Q08043 901 aaPredicted RBP16.22■□□□□ 0.19
RAPGEF4-201ENST00000397081 KRT71Q3SY84 523 aa16.22■□□□□ 0.19
RAPGEF4-201ENST00000397081 LARP4BQ92615 738 aaKnown RBP16.22■□□□□ 0.19
RAPGEF4-201ENST00000397081 EYA3Q99504 573 aa16.22■□□□□ 0.19
RAPGEF4-201ENST00000397081 DNAJC7Q99615 494 aa16.22■□□□□ 0.19
RAPGEF4-201ENST00000397081 KDM3BQ7LBC6 1761 aa16.22■□□□□ 0.19
RAPGEF4-201ENST00000397081 KRT13P13646 458 aa16.22■□□□□ 0.19
RAPGEF4-201ENST00000397081 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.22■□□□□ 0.19
RAPGEF4-201ENST00000397081 ROBO1Q9Y6N7 1651 aa16.22■□□□□ 0.19
RAPGEF4-201ENST00000397081 AFDNP55196 1824 aaKnown RBP16.22■□□□□ 0.19
RAPGEF4-201ENST00000397081 A0A1W2PQC6 194 aa16.22■□□□□ 0.19
RAPGEF4-201ENST00000397081 FAM153BP0C7A2 387 aa16.22■□□□□ 0.19
RAPGEF4-201ENST00000397081 FAM153CQ494X1 144 aa16.22■□□□□ 0.19
RAPGEF4-201ENST00000397081 MMS22LQ6ZRQ5 1243 aa16.22■□□□□ 0.19
RAPGEF4-201ENST00000397081 CCDC25Q86WR0 208 aa16.22■□□□□ 0.19
RAPGEF4-201ENST00000397081 GIMAP8Q8ND71 665 aaPredicted RBP16.22■□□□□ 0.19
RAPGEF4-201ENST00000397081 GLIS3Q8NEA6 775 aa16.22■□□□□ 0.19
RAPGEF4-201ENST00000397081 RIOK1Q9BRS2 568 aaKnown RBP16.22■□□□□ 0.19
RAPGEF4-201ENST00000397081 FAM153AQ9UHL3 310 aa16.22■□□□□ 0.19
RAPGEF4-201ENST00000397081 MINPP1Q9UNW1 487 aa16.22■□□□□ 0.19
RAPGEF4-201ENST00000397081 PDS5AQ29RF7 1337 aaKnown RBP16.22■□□□□ 0.19
RAPGEF4-201ENST00000397081 PLEKHG2Q9H7P9 1386 aa16.22■□□□□ 0.19
RAPGEF4-201ENST00000397081 GCOM1H8Y6P7 765 aaPredicted RBP16.22■□□□□ 0.19
RAPGEF4-201ENST00000397081 MYZAPP0CAP1 466 aa16.22■□□□□ 0.19
RAPGEF4-201ENST00000397081 TRADDQ15628 312 aa16.22■□□□□ 0.19
RAPGEF4-201ENST00000397081 PARP10Q53GL7 1025 aa16.22■□□□□ 0.19
RAPGEF4-201ENST00000397081 PAPD7Q5XG87 772 aaKnown RBP16.22■□□□□ 0.19
RAPGEF4-201ENST00000397081 ZSCAN29Q8IWY8 852 aaPredicted RBP16.22■□□□□ 0.19
RAPGEF4-201ENST00000397081 TEX11Q8IYF3 940 aa16.22■□□□□ 0.19
RAPGEF4-201ENST00000397081 SH3RF3Q8TEJ3 882 aaPredicted RBP16.22■□□□□ 0.19
RAPGEF4-201ENST00000397081 ARPP21Q9UBL0 812 aaPredicted RBP16.22■□□□□ 0.19
RAPGEF4-201ENST00000397081 SPATA31A5Q5VU36 1347 aa16.22■□□□□ 0.19
RAPGEF4-201ENST00000397081 SPATA31A7Q8IWB4 1347 aa16.22■□□□□ 0.19
RAPGEF4-201ENST00000397081 TDP2O95551 362 aa16.21■□□□□ 0.19
RAPGEF4-201ENST00000397081 SLC16A2P36021 539 aa16.21■□□□□ 0.19
RAPGEF4-201ENST00000397081 MAP2K2P36507 400 aa16.21■□□□□ 0.19
RAPGEF4-201ENST00000397081 MAN2A1Q16706 1144 aa16.21■□□□□ 0.19
RAPGEF4-201ENST00000397081 NAALADL2Q58DX5 795 aa16.21■□□□□ 0.19
RAPGEF4-201ENST00000397081 DYDC1Q8WWB3 177 aa16.21■□□□□ 0.19
RAPGEF4-201ENST00000397081 DUSP9Q99956 384 aaKnown RBP16.21■□□□□ 0.19
RAPGEF4-201ENST00000397081 CCNL1Q9UK58 526 aaPredicted RBP16.21■□□□□ 0.19
RAPGEF4-201ENST00000397081 ECM2O94769 699 aaPredicted RBP16.21■□□□□ 0.19
RAPGEF4-201ENST00000397081 ASIC2Q16515 512 aa16.21■□□□□ 0.19
RAPGEF4-201ENST00000397081 KRT25Q7Z3Z0 450 aa16.21■□□□□ 0.19
RAPGEF4-201ENST00000397081 DAAM2Q86T65 1068 aa16.21■□□□□ 0.19
RAPGEF4-201ENST00000397081 MYOCDQ8IZQ8 938 aa16.21■□□□□ 0.19
RAPGEF4-201ENST00000397081 CEP89Q96ST8 783 aa16.21■□□□□ 0.19
RAPGEF4-201ENST00000397081 SETDB2Q96T68 719 aa16.21■□□□□ 0.19
RAPGEF4-201ENST00000397081 PLAAQ9Y263 795 aa16.21■□□□□ 0.19
RAPGEF4-201ENST00000397081 LRRC10BA6NIK2 292 aa16.21■□□□□ 0.18
RAPGEF4-201ENST00000397081 EIF3HO15372 352 aaKnown RBP eCLIP16.21■□□□□ 0.18
RAPGEF4-201ENST00000397081 C3orf67Q6ZVT6 689 aa16.21■□□□□ 0.18
RAPGEF4-201ENST00000397081 DDX12PQ92771 950 aa16.21■□□□□ 0.18
RAPGEF4-201ENST00000397081 TMEM47Q9BQJ4 181 aa16.21■□□□□ 0.18
RAPGEF4-201ENST00000397081 DDX47Q9H0S4 455 aaKnown RBP16.21■□□□□ 0.18
RAPGEF4-201ENST00000397081 SH2D4AQ9H788 454 aa16.21■□□□□ 0.18
RAPGEF4-201ENST00000397081 VIPAS39Q9H9C1 493 aa16.21■□□□□ 0.18
RAPGEF4-201ENST00000397081 GLI1P08151 1106 aa16.2■□□□□ 0.18
RAPGEF4-201ENST00000397081 PTF1AQ7RTS3 328 aa16.2■□□□□ 0.18
RAPGEF4-201ENST00000397081 MTMR8Q96EF0 704 aa16.2■□□□□ 0.18
RAPGEF4-201ENST00000397081 RNPC3Q96LT9 517 aaKnown RBP16.2■□□□□ 0.18
RAPGEF4-201ENST00000397081 PCDHB13Q9Y5F0 798 aa16.2■□□□□ 0.18
RAPGEF4-201ENST00000397081 ANO9A1A5B4 782 aa16.2■□□□□ 0.18
RAPGEF4-201ENST00000397081 C6orf229H3BNL8 230 aa16.2■□□□□ 0.18
RAPGEF4-201ENST00000397081 RHOBTB3O94955 611 aa16.2■□□□□ 0.18
RAPGEF4-201ENST00000397081 MKRN4PQ13434 485 aaPredicted RBP16.2■□□□□ 0.18
RAPGEF4-201ENST00000397081 CCDC91Q7Z6B0 441 aa16.2■□□□□ 0.18
RAPGEF4-201ENST00000397081 RETREG2Q8NC44 543 aa16.2■□□□□ 0.18
RAPGEF4-201ENST00000397081 BRIP1Q9BX63 1249 aa16.2■□□□□ 0.18
RAPGEF4-201ENST00000397081 BUB1BO60566 1050 aaPredicted RBP16.2■□□□□ 0.18
RAPGEF4-201ENST00000397081 CERKQ8TCT0 537 aa16.2■□□□□ 0.18
RAPGEF4-201ENST00000397081 NSUN4Q96CB9 384 aaKnown RBP16.2■□□□□ 0.18
RAPGEF4-201ENST00000397081 LMO7Q8WWI1 1683 aa16.2■□□□□ 0.18
RAPGEF4-201ENST00000397081 MEIS1O00470 390 aa16.19■□□□□ 0.18
RAPGEF4-201ENST00000397081 KRIT1O00522 736 aa16.19■□□□□ 0.18
RAPGEF4-201ENST00000397081 ZNF263O14978 683 aa16.19■□□□□ 0.18
RAPGEF4-201ENST00000397081 TMOD1P28289 359 aa16.19■□□□□ 0.18
RAPGEF4-201ENST00000397081 SF3B2Q13435 895 aaKnown RBP16.19■□□□□ 0.18
RAPGEF4-201ENST00000397081 CREG2Q8IUH2 290 aa16.19■□□□□ 0.18
RAPGEF4-201ENST00000397081 RDH13Q8NBN7 331 aa16.19■□□□□ 0.18
RAPGEF4-201ENST00000397081 KIAA1024Q9UPX6 916 aa16.19■□□□□ 0.18
RAPGEF4-201ENST00000397081 THRAP3Q9Y2W1 955 aaKnown RBP16.19■□□□□ 0.18
RAPGEF4-201ENST00000397081 MYMKA6NI61 221 aa16.19■□□□□ 0.18
RAPGEF4-201ENST00000397081 FUT2Q10981 343 aa16.19■□□□□ 0.18
RAPGEF4-201ENST00000397081 PACSIN1Q9BY11 444 aa16.19■□□□□ 0.18
RAPGEF4-201ENST00000397081 AFF2P51816 1311 aa16.19■□□□□ 0.18
RAPGEF4-201ENST00000397081 TARSL2A2RTX5 802 aaKnown RBP16.19■□□□□ 0.18
RAPGEF4-201ENST00000397081 ZNF76P36508 570 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms