RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 NACC1Q96RE7 527 aa15.65■□□□□ 0.1
SHROOM1-203ENST00000378679 RABEP2Q9H5N1 569 aa15.65■□□□□ 0.1
SHROOM1-203ENST00000378679 ZNF70Q9UC06 446 aaPredicted RBP15.65■□□□□ 0.1
SHROOM1-203ENST00000378679 RHOXF2BP0C7M4 288 aa15.65■□□□□ 0.1
SHROOM1-203ENST00000378679 KIAA0753Q2KHM9 967 aa15.65■□□□□ 0.1
SHROOM1-203ENST00000378679 SFMBT2Q5VUG0 894 aa15.65■□□□□ 0.1
SHROOM1-203ENST00000378679 PRPF38AQ8NAV1 312 aaKnown RBP15.65■□□□□ 0.1
SHROOM1-203ENST00000378679 DEPTORQ8TB45 409 aa15.65■□□□□ 0.1
SHROOM1-203ENST00000378679 RHOXF2Q9BQY4 288 aa15.65■□□□□ 0.1
SHROOM1-203ENST00000378679 LSM14BQ9BX40 385 aaKnown RBP15.65■□□□□ 0.1
SHROOM1-203ENST00000378679 CARD6Q9BX69 1037 aa15.65■□□□□ 0.1
SHROOM1-203ENST00000378679 RNF181Q9P0P0 153 aa15.65■□□□□ 0.1
SHROOM1-203ENST00000378679 NALCNQ8IZF0 1738 aa15.65■□□□□ 0.1
SHROOM1-203ENST00000378679 NEFHP12036 1026 aa15.65■□□□□ 0.1
SHROOM1-203ENST00000378679 BRDTQ58F21 947 aaPredicted RBP15.65■□□□□ 0.1
SHROOM1-203ENST00000378679 EEPD1Q7L9B9 569 aa15.65■□□□□ 0.1
SHROOM1-203ENST00000378679 TAX1BP1Q86VP1 789 aa15.65■□□□□ 0.1
SHROOM1-203ENST00000378679 PRMT6Q96LA8 375 aaPredicted RBP15.65■□□□□ 0.1
SHROOM1-203ENST00000378679 NAPGQ99747 312 aaPredicted RBP15.65■□□□□ 0.1
SHROOM1-203ENST00000378679 CNTNAP5Q8WYK1 1306 aa15.65■□□□□ 0.1
SHROOM1-203ENST00000378679 ANKRD62A6NC57 917 aa15.65■□□□□ 0.1
SHROOM1-203ENST00000378679 EEF1GP26641 437 aaKnown RBP15.65■□□□□ 0.1
SHROOM1-203ENST00000378679 CCDC127Q96BQ5 260 aa15.65■□□□□ 0.1
SHROOM1-203ENST00000378679 PRR29P0C7W0 189 aa15.64■□□□□ 0.09
SHROOM1-203ENST00000378679 GJC1P36383 396 aa15.64■□□□□ 0.09
SHROOM1-203ENST00000378679 NYAP2Q9P242 653 aa15.64■□□□□ 0.09
SHROOM1-203ENST00000378679 GOLGA6L10A0A0M3HER8 536 aa15.64■□□□□ 0.09
SHROOM1-203ENST00000378679 FAM170AA1A519 330 aa15.64■□□□□ 0.09
SHROOM1-203ENST00000378679 HOXA10P31260 410 aaPredicted RBP15.64■□□□□ 0.09
SHROOM1-203ENST00000378679 IREB2P48200 963 aaKnown RBP15.64■□□□□ 0.09
SHROOM1-203ENST00000378679 EVCP57679 992 aa15.64■□□□□ 0.09
SHROOM1-203ENST00000378679 ST3GAL1Q11201 340 aa15.64■□□□□ 0.09
SHROOM1-203ENST00000378679 CTTNQ14247 550 aaKnown RBP15.64■□□□□ 0.09
SHROOM1-203ENST00000378679 FAM151AQ8WW52 585 aa15.64■□□□□ 0.09
SHROOM1-203ENST00000378679 RWDD2AQ9UIY3 292 aa15.64■□□□□ 0.09
SHROOM1-203ENST00000378679 SEC23AQ15436 765 aa15.64■□□□□ 0.09
SHROOM1-203ENST00000378679 PPP1R18Q6NYC8 613 aa15.64■□□□□ 0.09
SHROOM1-203ENST00000378679 RNF207Q6ZRF8 634 aa15.64■□□□□ 0.09
SHROOM1-203ENST00000378679 RMDN3Q96TC7 470 aa15.64■□□□□ 0.09
SHROOM1-203ENST00000378679 TSGA10Q9BZW7 698 aa15.64■□□□□ 0.09
SHROOM1-203ENST00000378679 SPON1Q9HCB6 807 aa15.64■□□□□ 0.09
SHROOM1-203ENST00000378679 IL1R1P14778 569 aa15.63■□□□□ 0.09
SHROOM1-203ENST00000378679 TNNI1P19237 187 aa15.63■□□□□ 0.09
SHROOM1-203ENST00000378679 IFFO1Q0D2I5 559 aa15.63■□□□□ 0.09
SHROOM1-203ENST00000378679 SEPT14Q6ZU15 432 aa15.63■□□□□ 0.09
SHROOM1-203ENST00000378679 METTL13Q8N6R0 699 aa15.63■□□□□ 0.09
SHROOM1-203ENST00000378679 PIGOQ8TEQ8 1089 aa15.63■□□□□ 0.09
SHROOM1-203ENST00000378679 DDX12PQ92771 950 aa15.63■□□□□ 0.09
SHROOM1-203ENST00000378679 ATP6V0A1Q93050 837 aa15.63■□□□□ 0.09
SHROOM1-203ENST00000378679 PSMB7Q99436 277 aa15.63■□□□□ 0.09
SHROOM1-203ENST00000378679 IFIH1Q9BYX4 1025 aaKnown RBP15.63■□□□□ 0.09
SHROOM1-203ENST00000378679 TMEM39BQ9GZU3 492 aa15.63■□□□□ 0.09
SHROOM1-203ENST00000378679 METTL14Q9HCE5 456 aaKnown RBP15.63■□□□□ 0.09
SHROOM1-203ENST00000378679 RIC8AQ9NPQ8 531 aa15.63■□□□□ 0.09
SHROOM1-203ENST00000378679 EMILIN3Q9NT22 766 aa15.63■□□□□ 0.09
SHROOM1-203ENST00000378679 FEM1BQ9UK73 627 aa15.63■□□□□ 0.09
SHROOM1-203ENST00000378679 TRPC6Q9Y210 931 aa15.63■□□□□ 0.09
SHROOM1-203ENST00000378679 PRPHP41219 470 aa15.63■□□□□ 0.09
SHROOM1-203ENST00000378679 ETF1P62495 437 aaKnown RBP15.63■□□□□ 0.09
SHROOM1-203ENST00000378679 HDLBPQ00341 1268 aaKnown RBP15.63■□□□□ 0.09
SHROOM1-203ENST00000378679 UTP14CQ5TAP6 766 aaKnown RBP15.63■□□□□ 0.09
SHROOM1-203ENST00000378679 POLD4Q9HCU8 107 aa15.63■□□□□ 0.09
SHROOM1-203ENST00000378679 KCNG1Q9UIX4 513 aa15.63■□□□□ 0.09
SHROOM1-203ENST00000378679 CHD2O14647 1828 aaKnown RBP15.63■□□□□ 0.09
SHROOM1-203ENST00000378679 STX10O60499 249 aa15.63■□□□□ 0.09
SHROOM1-203ENST00000378679 POLR2FP61218 127 aaKnown RBP15.63■□□□□ 0.09
SHROOM1-203ENST00000378679 ARMCX5Q6P1M9 558 aa15.63■□□□□ 0.09
SHROOM1-203ENST00000378679 PPP2R2CQ9Y2T4 447 aa15.63■□□□□ 0.09
SHROOM1-203ENST00000378679 CDC25BP30305 580 aa15.62■□□□□ 0.09
SHROOM1-203ENST00000378679 SECISBP2LQ93073 1101 aaKnown RBP15.62■□□□□ 0.09
SHROOM1-203ENST00000378679 ERO1AQ96HE7 468 aa15.62■□□□□ 0.09
SHROOM1-203ENST00000378679 NUCKS1Q9H1E3 243 aaKnown RBP15.62■□□□□ 0.09
SHROOM1-203ENST00000378679 CEP83Q9Y592 693 aa15.62■□□□□ 0.09
SHROOM1-203ENST00000378679 MRC1P22897 1456 aa15.62■□□□□ 0.09
SHROOM1-203ENST00000378679 LRRIQ4A6NIV6 560 aa15.62■□□□□ 0.09
SHROOM1-203ENST00000378679 POLGP54098 1239 aaPredicted RBP15.62■□□□□ 0.09
SHROOM1-203ENST00000378679 RNASE9P60153 205 aaKnown RBP15.62■□□□□ 0.09
SHROOM1-203ENST00000378679 PPP2R3AQ06190 1150 aa15.62■□□□□ 0.09
SHROOM1-203ENST00000378679 PRAMEF18Q5VWM3 479 aa15.62■□□□□ 0.09
SHROOM1-203ENST00000378679 GOLGA5Q8TBA6 731 aa15.62■□□□□ 0.09
SHROOM1-203ENST00000378679 KIAA1524Q8TCG1 905 aa15.62■□□□□ 0.09
SHROOM1-203ENST00000378679 ADD3Q9UEY8 706 aaKnown RBP15.62■□□□□ 0.09
SHROOM1-203ENST00000378679 CLIC2O15247 247 aa15.62■□□□□ 0.09
SHROOM1-203ENST00000378679 CAPN2P17655 700 aa15.62■□□□□ 0.09
SHROOM1-203ENST00000378679 TRPC3Q13507 836 aa15.62■□□□□ 0.09
SHROOM1-203ENST00000378679 COL9A3Q14050 684 aaPredicted RBP15.62■□□□□ 0.09
SHROOM1-203ENST00000378679 ARID5BQ14865 1188 aa15.62■□□□□ 0.09
SHROOM1-203ENST00000378679 ARMC9Q7Z3E5 817 aa15.62■□□□□ 0.09
SHROOM1-203ENST00000378679 METTL16Q86W50 562 aaKnown RBP15.62■□□□□ 0.09
SHROOM1-203ENST00000378679 EPN1Q9Y6I3 576 aaPredicted RBP15.62■□□□□ 0.09
SHROOM1-203ENST00000378679 E9PMD0 336 aa15.61■□□□□ 0.09
SHROOM1-203ENST00000378679 SMIM22K7EJ46 135 aa15.61■□□□□ 0.09
SHROOM1-203ENST00000378679 BCRP11274 1271 aa15.61■□□□□ 0.09
SHROOM1-203ENST00000378679 STAT1P42224 750 aa15.61■□□□□ 0.09
SHROOM1-203ENST00000378679 MKRN3Q13064 507 aaKnown RBP15.61■□□□□ 0.09
SHROOM1-203ENST00000378679 NTRK3Q16288 839 aa15.61■□□□□ 0.09
SHROOM1-203ENST00000378679 GBP6Q6ZN66 633 aa15.61■□□□□ 0.09
SHROOM1-203ENST00000378679 CDHR1Q96JP9 859 aa15.61■□□□□ 0.09
SHROOM1-203ENST00000378679 CEP170P1Q96L14 293 aa15.61■□□□□ 0.09
SHROOM1-203ENST00000378679 RIC1Q4ADV7 1423 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms