RNA–Protein interactions for RNA: ENST00000369096.8

PRDM1-203, Transcript of PR/SET domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM1, Length 5,164 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-203ENST00000369096 ATP10AO60312 1499 aa17.09■□□□□ 0.33
PRDM1-203ENST00000369096 ZMYND10O75800 440 aa17.09■□□□□ 0.33
PRDM1-203ENST00000369096 FAM133BQ5BKY9 247 aaKnown RBP17.09■□□□□ 0.33
PRDM1-203ENST00000369096 SUPT20HQ8NEM7 779 aa17.09■□□□□ 0.33
PRDM1-203ENST00000369096 PCDHB4Q9Y5E5 795 aa17.09■□□□□ 0.33
PRDM1-203ENST00000369096 PNMA6EA0A0J9YXQ4 647 aa17.09■□□□□ 0.33
PRDM1-203ENST00000369096 MT-ND3P03897 115 aa17.09■□□□□ 0.33
PRDM1-203ENST00000369096 SKIP12755 728 aa17.09■□□□□ 0.33
PRDM1-203ENST00000369096 TAF11Q15544 211 aa17.09■□□□□ 0.33
PRDM1-203ENST00000369096 MFSD14BQ5SR56 506 aa17.09■□□□□ 0.33
PRDM1-203ENST00000369096 NRBF2Q96F24 287 aa17.09■□□□□ 0.33
PRDM1-203ENST00000369096 KLRF2D3W0D1 207 aa17.08■□□□□ 0.33
PRDM1-203ENST00000369096 GOLGA8SH3BPF8 625 aa17.08■□□□□ 0.33
PRDM1-203ENST00000369096 PTPREP23469 700 aa17.08■□□□□ 0.33
PRDM1-203ENST00000369096 CMA1P23946 247 aa17.08■□□□□ 0.33
PRDM1-203ENST00000369096 ART3Q13508 389 aa17.08■□□□□ 0.33
PRDM1-203ENST00000369096 MCTP2Q6DN12 878 aa17.08■□□□□ 0.33
PRDM1-203ENST00000369096 FANCBQ8NB91 859 aa17.08■□□□□ 0.33
PRDM1-203ENST00000369096 PNMA1Q8ND90 353 aa17.08■□□□□ 0.33
PRDM1-203ENST00000369096 IRAK4Q9NWZ3 460 aa17.08■□□□□ 0.33
PRDM1-203ENST00000369096 DDX25Q9UHL0 483 aaKnown RBP17.08■□□□□ 0.33
PRDM1-203ENST00000369096 POLR3AO14802 1390 aaPredicted RBP17.08■□□□□ 0.33
PRDM1-203ENST00000369096 GOLGA8HP0CJ92 632 aa17.08■□□□□ 0.32
PRDM1-203ENST00000369096 HSPA8P11142 646 aaKnown RBP17.08■□□□□ 0.32
PRDM1-203ENST00000369096 MFAP3P55082 362 aa17.08■□□□□ 0.32
PRDM1-203ENST00000369096 SLC35F6Q8N357 371 aa17.08■□□□□ 0.32
PRDM1-203ENST00000369096 NUDCD1Q96RS6 583 aa17.08■□□□□ 0.32
PRDM1-203ENST00000369096 MROH5Q6ZUA9 1318 aa17.08■□□□□ 0.32
PRDM1-203ENST00000369096 BTBD18B2RXH4 712 aa17.08■□□□□ 0.32
PRDM1-203ENST00000369096 SLCO1A2P46721 670 aa17.08■□□□□ 0.32
PRDM1-203ENST00000369096 BASP1P80723 227 aaKnown RBP17.08■□□□□ 0.32
PRDM1-203ENST00000369096 LRRC47Q8N1G4 583 aaKnown RBP17.08■□□□□ 0.32
PRDM1-203ENST00000369096 GPKOWQ92917 476 aaPredicted RBP eCLIP17.08■□□□□ 0.32
PRDM1-203ENST00000369096 EDC3Q96F86 508 aaKnown RBP17.08■□□□□ 0.32
PRDM1-203ENST00000369096 MRFAP1L1Q96HT8 127 aa17.08■□□□□ 0.32
PRDM1-203ENST00000369096 TM6SF1Q9BZW5 370 aa17.08■□□□□ 0.32
PRDM1-203ENST00000369096 BTG4Q9NY30 223 aa17.08■□□□□ 0.32
PRDM1-203ENST00000369096 PNMA2Q9UL42 364 aa17.08■□□□□ 0.32
PRDM1-203ENST00000369096 RRP15Q9Y3B9 282 aaKnown RBP17.08■□□□□ 0.32
PRDM1-203ENST00000369096 MAPK4P31152 587 aa17.08■□□□□ 0.32
PRDM1-203ENST00000369096 CASP14P31944 242 aa17.08■□□□□ 0.32
PRDM1-203ENST00000369096 COPB1P53618 953 aaKnown RBP17.08■□□□□ 0.32
PRDM1-203ENST00000369096 THOC5Q13769 683 aaKnown RBP17.08■□□□□ 0.32
PRDM1-203ENST00000369096 SGO2Q562F6 1265 aa17.08■□□□□ 0.32
PRDM1-203ENST00000369096 FBXO11Q86XK2 927 aa17.08■□□□□ 0.32
PRDM1-203ENST00000369096 CLIC6Q96NY7 704 aa17.08■□□□□ 0.32
PRDM1-203ENST00000369096 ZSCAN10Q96SZ4 725 aaPredicted RBP17.08■□□□□ 0.32
PRDM1-203ENST00000369096 AS3MTQ9HBK9 375 aa17.08■□□□□ 0.32
PRDM1-203ENST00000369096 NRBP2Q9NSY0 501 aa17.08■□□□□ 0.32
PRDM1-203ENST00000369096 TBK1Q9UHD2 729 aa17.08■□□□□ 0.32
PRDM1-203ENST00000369096 MYL7Q01449 175 aa17.07■□□□□ 0.32
PRDM1-203ENST00000369096 PDE6AP16499 860 aa17.07■□□□□ 0.32
PRDM1-203ENST00000369096 KPNA2P52292 529 aaKnown RBP17.07■□□□□ 0.32
PRDM1-203ENST00000369096 EAPPQ56P03 285 aaPredicted RBP17.07■□□□□ 0.32
PRDM1-203ENST00000369096 TTC1Q99614 292 aa17.07■□□□□ 0.32
PRDM1-203ENST00000369096 CCPG1Q9ULG6 757 aa17.07■□□□□ 0.32
PRDM1-203ENST00000369096 SHROOM2Q13796 1616 aa17.07■□□□□ 0.32
PRDM1-203ENST00000369096 PPIP5K2O43314 1243 aa17.07■□□□□ 0.32
PRDM1-203ENST00000369096 DYNLT1P63172 113 aa17.07■□□□□ 0.32
PRDM1-203ENST00000369096 ATG16L1Q676U5 607 aa17.07■□□□□ 0.32
PRDM1-203ENST00000369096 ZNF274Q96GC6 653 aaPredicted RBP17.07■□□□□ 0.32
PRDM1-203ENST00000369096 CNOT6LQ96LI5 555 aaKnown RBP17.07■□□□□ 0.32
PRDM1-203ENST00000369096 KIF9Q9HAQ2 790 aa17.07■□□□□ 0.32
PRDM1-203ENST00000369096 CPSF3Q9UKF6 684 aaKnown RBP17.07■□□□□ 0.32
PRDM1-203ENST00000369096 MAP3K7O43318 606 aa17.07■□□□□ 0.32
PRDM1-203ENST00000369096 NCF2P19878 526 aaPredicted RBP17.07■□□□□ 0.32
PRDM1-203ENST00000369096 ARHGDIAP52565 204 aa17.07■□□□□ 0.32
PRDM1-203ENST00000369096 GRAMD1BQ3KR37 738 aa17.07■□□□□ 0.32
PRDM1-203ENST00000369096 TRIML2Q8N7C3 387 aa17.07■□□□□ 0.32
PRDM1-203ENST00000369096 GDAP1Q8TB36 358 aa17.07■□□□□ 0.32
PRDM1-203ENST00000369096 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.07■□□□□ 0.32
PRDM1-203ENST00000369096 TUBGCP2Q9BSJ2 902 aa17.07■□□□□ 0.32
PRDM1-203ENST00000369096 EIF3CLB5ME19 914 aaKnown RBP17.06■□□□□ 0.32
PRDM1-203ENST00000369096 SCG2P13521 617 aa17.06■□□□□ 0.32
PRDM1-203ENST00000369096 HOXC9P31274 260 aa17.06■□□□□ 0.32
PRDM1-203ENST00000369096 EPHB4P54760 987 aa17.06■□□□□ 0.32
PRDM1-203ENST00000369096 OCRLQ01968 901 aa17.06■□□□□ 0.32
PRDM1-203ENST00000369096 POLA2Q14181 598 aa17.06■□□□□ 0.32
PRDM1-203ENST00000369096 EIF3CQ99613 913 aaKnown RBP17.06■□□□□ 0.32
PRDM1-203ENST00000369096 INTUQ9ULD6 942 aa17.06■□□□□ 0.32
PRDM1-203ENST00000369096 MCF2LO15068 1137 aa17.06■□□□□ 0.32
PRDM1-203ENST00000369096 TNFAIP1Q13829 316 aa17.06■□□□□ 0.32
PRDM1-203ENST00000369096 GCKRQ14397 625 aa17.06■□□□□ 0.32
PRDM1-203ENST00000369096 ABI1Q8IZP0 508 aa17.06■□□□□ 0.32
PRDM1-203ENST00000369096 TNKSO95271 1327 aa17.06■□□□□ 0.32
PRDM1-203ENST00000369096 SEC31AO94979 1220 aaKnown RBP17.06■□□□□ 0.32
PRDM1-203ENST00000369096 ECEL1O95672 775 aa17.06■□□□□ 0.32
PRDM1-203ENST00000369096 SLC38A10Q9HBR0 1119 aa17.06■□□□□ 0.32
PRDM1-203ENST00000369096 ZNF518AQ6AHZ1 1483 aa17.06■□□□□ 0.32
PRDM1-203ENST00000369096 TRPM2O94759 1503 aa17.06■□□□□ 0.32
PRDM1-203ENST00000369096 INSRP06213 1382 aa17.06■□□□□ 0.32
PRDM1-203ENST00000369096 XPOTO43592 962 aaKnown RBP17.06■□□□□ 0.32
PRDM1-203ENST00000369096 HSPA6P17066 643 aa17.06■□□□□ 0.32
PRDM1-203ENST00000369096 RAP1GDS1P52306 607 aa17.06■□□□□ 0.32
PRDM1-203ENST00000369096 HIBCHQ6NVY1 386 aaPredicted RBP17.06■□□□□ 0.32
PRDM1-203ENST00000369096 WDR91A4D1P6 747 aa17.05■□□□□ 0.32
PRDM1-203ENST00000369096 DHX9Q08211 1270 aaKnown RBP17.05■□□□□ 0.32
PRDM1-203ENST00000369096 PTGDRQ13258 359 aa17.05■□□□□ 0.32
PRDM1-203ENST00000369096 TRIM67Q6ZTA4 783 aa17.05■□□□□ 0.32
PRDM1-203ENST00000369096 CALN1Q9BXU9 219 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms