RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 DICER1Q9UPY3 1922 aaKnown RBP9.99□□□□□ -0.81
H3F3A-201ENST00000366813 ZNF541Q9H0D2 1346 aa9.99□□□□□ -0.81
H3F3A-201ENST00000366813 CUL9Q8IWT3 2517 aa9.99□□□□□ -0.81
H3F3A-201ENST00000366813 TRAF5O00463 557 aa9.99□□□□□ -0.81
H3F3A-201ENST00000366813 RRS1Q15050 365 aaKnown RBP9.99□□□□□ -0.81
H3F3A-201ENST00000366813 PNMA8AQ86V59 439 aaPredicted RBP9.99□□□□□ -0.81
H3F3A-201ENST00000366813 ZNF622Q969S3 477 aaKnown RBP eCLIP9.99□□□□□ -0.81
H3F3A-201ENST00000366813 CCDC120Q96HB5 630 aa9.99□□□□□ -0.81
H3F3A-201ENST00000366813 SCN4AP35499 1836 aa9.98□□□□□ -0.81
H3F3A-201ENST00000366813 MYH14Q7Z406 1995 aaKnown RBP9.98□□□□□ -0.81
H3F3A-201ENST00000366813 RNF123Q5XPI4 1314 aa9.98□□□□□ -0.81
H3F3A-201ENST00000366813 ADAMTSL1Q8N6G6 1762 aa9.98□□□□□ -0.81
H3F3A-201ENST00000366813 KRTAP4-8A0A0G2JLE6 195 aa9.98□□□□□ -0.81
H3F3A-201ENST00000366813 DBX1A6NMT0 343 aa9.98□□□□□ -0.81
H3F3A-201ENST00000366813 PF4P02776 101 aa9.98□□□□□ -0.81
H3F3A-201ENST00000366813 SERPINB2P05120 415 aa9.98□□□□□ -0.81
H3F3A-201ENST00000366813 KIR3DL1P43629 444 aa9.98□□□□□ -0.81
H3F3A-201ENST00000366813 CRKLP46109 303 aaKnown RBP9.98□□□□□ -0.81
H3F3A-201ENST00000366813 LMNB2Q03252 620 aa9.98□□□□□ -0.81
H3F3A-201ENST00000366813 CAMK2GQ13555 558 aaPredicted RBP9.98□□□□□ -0.81
H3F3A-201ENST00000366813 NFIXQ14938 502 aa9.98□□□□□ -0.81
H3F3A-201ENST00000366813 TMEM67Q5HYA8 995 aa9.98□□□□□ -0.81
H3F3A-201ENST00000366813 FYB2Q5VWT5 728 aa9.98□□□□□ -0.81
H3F3A-201ENST00000366813 SLC6A19Q695T7 634 aa9.98□□□□□ -0.81
H3F3A-201ENST00000366813 MPZL3Q6UWV2 235 aa9.98□□□□□ -0.81
H3F3A-201ENST00000366813 HDGFL2Q7Z4V5 671 aaPredicted RBP9.98□□□□□ -0.81
H3F3A-201ENST00000366813 THAP5Q7Z6K1 395 aa9.98□□□□□ -0.81
H3F3A-201ENST00000366813 SLC17A8Q8NDX2 589 aa9.98□□□□□ -0.81
H3F3A-201ENST00000366813 KIRREL1Q96J84 757 aa9.98□□□□□ -0.81
H3F3A-201ENST00000366813 SLC12A5Q9H2X9 1139 aa9.98□□□□□ -0.81
H3F3A-201ENST00000366813 TJP2Q9UDY2 1190 aa9.98□□□□□ -0.81
H3F3A-201ENST00000366813 ST14Q9Y5Y6 855 aa9.98□□□□□ -0.81
H3F3A-201ENST00000366813 CARMIL3Q8ND23 1372 aa9.98□□□□□ -0.81
H3F3A-201ENST00000366813 LTBP3Q9NS15 1303 aa9.97□□□□□ -0.81
H3F3A-201ENST00000366813 SMG6Q86US8 1419 aaKnown RBP9.97□□□□□ -0.81
H3F3A-201ENST00000366813 EIF4A3P38919 411 aaKnown RBP9.97□□□□□ -0.81
H3F3A-201ENST00000366813 HSP90AB2PQ58FF8 381 aa9.97□□□□□ -0.81
H3F3A-201ENST00000366813 MRPL41Q8IXM3 137 aaKnown RBP9.97□□□□□ -0.81
H3F3A-201ENST00000366813 TMEM87BQ96K49 555 aa9.97□□□□□ -0.81
H3F3A-201ENST00000366813 DPH2Q9BQC3 489 aaPredicted RBP9.97□□□□□ -0.81
H3F3A-201ENST00000366813 KCNQ5Q9NR82 932 aa9.97□□□□□ -0.81
H3F3A-201ENST00000366813 ADAMTS1Q9UHI8 967 aa9.97□□□□□ -0.81
H3F3A-201ENST00000366813 EDC4Q6P2E9 1401 aaKnown RBP9.96□□□□□ -0.81
H3F3A-201ENST00000366813 MKI67P46013 3256 aaKnown RBP9.96□□□□□ -0.81
H3F3A-201ENST00000366813 ZNF503-AS2A6NEH8 195 aa9.96□□□□□ -0.82
H3F3A-201ENST00000366813 GARTP22102 1010 aa9.96□□□□□ -0.82
H3F3A-201ENST00000366813 ETV3P41162 512 aa9.96□□□□□ -0.82
H3F3A-201ENST00000366813 LIN37Q96GY3 246 aaPredicted RBP9.96□□□□□ -0.82
H3F3A-201ENST00000366813 COG3Q96JB2 828 aa9.96□□□□□ -0.82
H3F3A-201ENST00000366813 ACBD3Q9H3P7 528 aa9.96□□□□□ -0.82
H3F3A-201ENST00000366813 CCSER2Q9H7U1 834 aa9.96□□□□□ -0.82
H3F3A-201ENST00000366813 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.96□□□□□ -0.82
H3F3A-201ENST00000366813 SZT2Q5T011 3432 aa9.95□□□□□ -0.82
H3F3A-201ENST00000366813 FER1L6Q2WGJ9 1857 aa9.95□□□□□ -0.82
H3F3A-201ENST00000366813 GLI1P08151 1106 aa9.95□□□□□ -0.82
H3F3A-201ENST00000366813 GDNFP39905 211 aa9.95□□□□□ -0.82
H3F3A-201ENST00000366813 RPL6Q02878 288 aaKnown RBP9.95□□□□□ -0.82
H3F3A-201ENST00000366813 FAM160A1Q05DH4 1040 aa9.95□□□□□ -0.82
H3F3A-201ENST00000366813 FBXL19Q6PCT2 694 aa9.95□□□□□ -0.82
H3F3A-201ENST00000366813 SAPCD2Q86UD0 394 aa9.95□□□□□ -0.82
H3F3A-201ENST00000366813 DLEC1Q9Y238 1755 aa9.95□□□□□ -0.82
H3F3A-201ENST00000366813 PHKG2P15735 406 aa9.94□□□□□ -0.82
H3F3A-201ENST00000366813 TNK2Q07912 1038 aa9.94□□□□□ -0.82
H3F3A-201ENST00000366813 CCDC84Q86UT8 332 aaPredicted RBP9.94□□□□□ -0.82
H3F3A-201ENST00000366813 MCATQ8IVS2 390 aaKnown RBP9.94□□□□□ -0.82
H3F3A-201ENST00000366813 ZNF296Q8WUU4 475 aaPredicted RBP9.94□□□□□ -0.82
H3F3A-201ENST00000366813 ALPK1Q96QP1 1244 aa9.94□□□□□ -0.82
H3F3A-201ENST00000366813 SPON2Q9BUD6 331 aa9.94□□□□□ -0.82
H3F3A-201ENST00000366813 AFDNP55196 1824 aaKnown RBP9.94□□□□□ -0.82
H3F3A-201ENST00000366813 A0A1W2PP64 1363 aa9.93□□□□□ -0.82
H3F3A-201ENST00000366813 RTL1A6NKG5 1358 aa9.93□□□□□ -0.82
H3F3A-201ENST00000366813 GREM1O60565 184 aa9.93□□□□□ -0.82
H3F3A-201ENST00000366813 MESP2Q0VG99 397 aa9.93□□□□□ -0.82
H3F3A-201ENST00000366813 SNAP47Q5SQN1 464 aa9.93□□□□□ -0.82
H3F3A-201ENST00000366813 GOLM1Q8NBJ4 401 aa9.93□□□□□ -0.82
H3F3A-201ENST00000366813 SLAMF8Q9P0V8 285 aa9.93□□□□□ -0.82
H3F3A-201ENST00000366813 COL5A3P25940 1745 aaPredicted RBP9.93□□□□□ -0.82
H3F3A-201ENST00000366813 CELF2O95319 508 aaKnown RBP9.92□□□□□ -0.82
H3F3A-201ENST00000366813 BPNT1O95861 308 aa9.92□□□□□ -0.82
H3F3A-201ENST00000366813 BNC2Q6ZN30 1099 aaPredicted RBP9.92□□□□□ -0.82
H3F3A-201ENST00000366813 CTU1Q7Z7A3 348 aaKnown RBP9.92□□□□□ -0.82
H3F3A-201ENST00000366813 TTC6Q86TZ1 520 aa9.92□□□□□ -0.82
H3F3A-201ENST00000366813 KIAA0825Q8IV33 1275 aa9.92□□□□□ -0.82
H3F3A-201ENST00000366813 IFNL2Q8IZJ0 200 aa9.92□□□□□ -0.82
H3F3A-201ENST00000366813 PIWIL2Q8TC59 973 aaKnown RBP9.92□□□□□ -0.82
H3F3A-201ENST00000366813 ZNF277Q9NRM2 450 aaPredicted RBP9.92□□□□□ -0.82
H3F3A-201ENST00000366813 ADAM30Q9UKF2 790 aa9.92□□□□□ -0.82
H3F3A-201ENST00000366813 CEP131Q9UPN4 1083 aa9.92□□□□□ -0.82
H3F3A-201ENST00000366813 SUPT16HQ9Y5B9 1047 aaKnown RBP9.92□□□□□ -0.82
H3F3A-201ENST00000366813 RAC2P15153 192 aa9.91□□□□□ -0.82
H3F3A-201ENST00000366813 PLCG1P19174 1290 aa9.91□□□□□ -0.82
H3F3A-201ENST00000366813 TNNI2P48788 182 aa9.91□□□□□ -0.82
H3F3A-201ENST00000366813 TMPRSS7Q7RTY8 843 aa9.91□□□□□ -0.82
H3F3A-201ENST00000366813 TERF2IPQ9NYB0 399 aa9.91□□□□□ -0.82
H3F3A-201ENST00000366813 INSRP06213 1382 aa9.9□□□□□ -0.82
H3F3A-201ENST00000366813 FAM221AA4D161 298 aa9.9□□□□□ -0.82
H3F3A-201ENST00000366813 F13A1P00488 732 aa9.9□□□□□ -0.82
H3F3A-201ENST00000366813 EPS15P42566 896 aa9.9□□□□□ -0.82
H3F3A-201ENST00000366813 PAK2Q13177 524 aa9.9□□□□□ -0.82
H3F3A-201ENST00000366813 PRR23BQ6ZRT6 265 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms