RNA–Protein interactions for RNA: ENST00000361293.9

CHD1L-201, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2 BASIC

Gene CHD1L, Length 2,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-201ENST00000361293 LRRC41Q15345 812 aa22.39■■□□□ 1.17
CHD1L-201ENST00000361293 CRYGNQ8WXF5 182 aa22.39■■□□□ 1.17
CHD1L-201ENST00000361293 CAMKK2Q96RR4 588 aa22.39■■□□□ 1.17
CHD1L-201ENST00000361293 MRFAP1Q9Y605 127 aa22.39■■□□□ 1.17
CHD1L-201ENST00000361293 RAD17O75943 681 aa22.38■■□□□ 1.17
CHD1L-201ENST00000361293 ECE1P42892 770 aa22.38■■□□□ 1.17
CHD1L-201ENST00000361293 MTIF2P46199 727 aaKnown RBP22.38■■□□□ 1.17
CHD1L-201ENST00000361293 RBM26Q5T8P6 1007 aaKnown RBP22.38■■□□□ 1.17
CHD1L-201ENST00000361293 DNAJC19Q96DA6 116 aa22.38■■□□□ 1.17
CHD1L-201ENST00000361293 SLF1Q9BQI6 1058 aa22.38■■□□□ 1.17
CHD1L-201ENST00000361293 AMNQ9BXJ7 453 aa22.38■■□□□ 1.17
CHD1L-201ENST00000361293 TTYH3Q9C0H2 523 aa22.38■■□□□ 1.17
CHD1L-201ENST00000361293 AGPAT5Q9NUQ2 364 aa22.38■■□□□ 1.17
CHD1L-201ENST00000361293 LUC7L2Q9Y383 392 aaKnown RBP22.38■■□□□ 1.17
CHD1L-201ENST00000361293 COL4A5P29400 1685 aa22.38■■□□□ 1.17
CHD1L-201ENST00000361293 E9PMD0 336 aa22.38■■□□□ 1.17
CHD1L-201ENST00000361293 TADA3O75528 432 aa22.38■■□□□ 1.17
CHD1L-201ENST00000361293 PPP1R2P41236 205 aa22.38■■□□□ 1.17
CHD1L-201ENST00000361293 SYDE2Q5VT97 1194 aa22.38■■□□□ 1.17
CHD1L-201ENST00000361293 WDR59Q6PJI9 974 aa22.38■■□□□ 1.17
CHD1L-201ENST00000361293 DNAJC7Q99615 494 aa22.38■■□□□ 1.17
CHD1L-201ENST00000361293 CAPN11Q9UMQ6 739 aa22.38■■□□□ 1.17
CHD1L-201ENST00000361293 POTEB3A0JP26 581 aa22.37■■□□□ 1.17
CHD1L-201ENST00000361293 POTECB2RU33 542 aa22.37■■□□□ 1.17
CHD1L-201ENST00000361293 OPLAHO14841 1288 aa22.37■■□□□ 1.17
CHD1L-201ENST00000361293 USP11P51784 963 aa22.37■■□□□ 1.17
CHD1L-201ENST00000361293 CBX1P83916 185 aa22.37■■□□□ 1.17
CHD1L-201ENST00000361293 ARHGAP4P98171 946 aa22.37■■□□□ 1.17
CHD1L-201ENST00000361293 TBC1D8BQ0IIM8 1120 aa22.37■■□□□ 1.17
CHD1L-201ENST00000361293 KIAA1755Q5JYT7 1200 aa22.37■■□□□ 1.17
CHD1L-201ENST00000361293 POTEBQ6S5H4 581 aa22.37■■□□□ 1.17
CHD1L-201ENST00000361293 MNS1Q8NEH6 495 aa22.37■■□□□ 1.17
CHD1L-201ENST00000361293 OR8K1Q8NGG5 319 aa22.37■■□□□ 1.17
CHD1L-201ENST00000361293 NOC4LQ9BVI4 516 aaKnown RBP22.37■■□□□ 1.17
CHD1L-201ENST00000361293 GLT8D2Q9H1C3 349 aa22.37■■□□□ 1.17
CHD1L-201ENST00000361293 STK32BQ9NY57 414 aa22.37■■□□□ 1.17
CHD1L-201ENST00000361293 REXO2Q9Y3B8 237 aaKnown RBP22.37■■□□□ 1.17
CHD1L-201ENST00000361293 SPDYE2BA6NHP3 402 aa22.37■■□□□ 1.17
CHD1L-201ENST00000361293 SPDYE6P0CI01 402 aa22.37■■□□□ 1.17
CHD1L-201ENST00000361293 BMP3P12645 472 aa22.37■■□□□ 1.17
CHD1L-201ENST00000361293 FBXO11Q86XK2 927 aa22.37■■□□□ 1.17
CHD1L-201ENST00000361293 FGFBP2Q9BYJ0 223 aa22.37■■□□□ 1.17
CHD1L-201ENST00000361293 KIAA1024Q9UPX6 916 aa22.37■■□□□ 1.17
CHD1L-201ENST00000361293 PSME4Q14997 1843 aa22.37■■□□□ 1.17
CHD1L-201ENST00000361293 CYP3A7-CYP3A51PA0A087WV96 503 aa22.36■■□□□ 1.17
CHD1L-201ENST00000361293 SSBP05455 408 aaKnown RBP eCLIP22.36■■□□□ 1.17
CHD1L-201ENST00000361293 CYP3A7P24462 503 aa22.36■■□□□ 1.17
CHD1L-201ENST00000361293 ARHGAP25P42331 645 aa22.36■■□□□ 1.17
CHD1L-201ENST00000361293 ARHGAP29Q52LW3 1261 aa22.36■■□□□ 1.17
CHD1L-201ENST00000361293 HYIQ5T013 277 aa22.36■■□□□ 1.17
CHD1L-201ENST00000361293 FAM114A1Q8IWE2 563 aa22.36■■□□□ 1.17
CHD1L-201ENST00000361293 CDAN1Q8IWY9 1227 aa22.36■■□□□ 1.17
CHD1L-201ENST00000361293 GUF1Q8N442 669 aaKnown RBP22.36■■□□□ 1.17
CHD1L-201ENST00000361293 SUPT20HQ8NEM7 779 aa22.36■■□□□ 1.17
CHD1L-201ENST00000361293 MBOAT7Q96N66 472 aa22.36■■□□□ 1.17
CHD1L-201ENST00000361293 GTPBP4Q9BZE4 634 aaKnown RBP22.36■■□□□ 1.17
CHD1L-201ENST00000361293 ZBTB12Q9Y330 459 aaPredicted RBP22.36■■□□□ 1.17
CHD1L-201ENST00000361293 ERCC3P19447 782 aa22.36■■□□□ 1.17
CHD1L-201ENST00000361293 COASYQ13057 564 aa22.36■■□□□ 1.17
CHD1L-201ENST00000361293 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.36■■□□□ 1.175e-6■□□□□ 10
CHD1L-201ENST00000361293 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.36■■□□□ 1.17
CHD1L-201ENST00000361293 PSMD14O00487 310 aa22.35■■□□□ 1.17
CHD1L-201ENST00000361293 HOXA13P31271 388 aaPredicted RBP22.35■■□□□ 1.17
CHD1L-201ENST00000361293 AP3B2Q13367 1082 aa22.35■■□□□ 1.17
CHD1L-201ENST00000361293 PRR16Q569H4 304 aa22.35■■□□□ 1.17
CHD1L-201ENST00000361293 ZNF569Q5MCW4 686 aa22.35■■□□□ 1.17
CHD1L-201ENST00000361293 ACER1Q8TDN7 264 aa22.35■■□□□ 1.17
CHD1L-201ENST00000361293 KIF5CO60282 957 aa22.35■■□□□ 1.17
CHD1L-201ENST00000361293 MED24O75448 989 aa22.35■■□□□ 1.17
CHD1L-201ENST00000361293 TRIM21P19474 475 aaKnown RBP22.35■■□□□ 1.17
CHD1L-201ENST00000361293 CACNB1Q02641 598 aaPredicted RBP22.35■■□□□ 1.17
CHD1L-201ENST00000361293 RSBN1LQ6PCB5 846 aaPredicted RBP22.35■■□□□ 1.17
CHD1L-201ENST00000361293 ETNPPLQ8TBG4 499 aa22.35■■□□□ 1.17
CHD1L-201ENST00000361293 LENG9Q96B70 501 aa22.35■■□□□ 1.17
CHD1L-201ENST00000361293 EPC1Q9H2F5 836 aa22.35■■□□□ 1.17
CHD1L-201ENST00000361293 ZNF277Q9NRM2 450 aaPredicted RBP22.35■■□□□ 1.17
CHD1L-201ENST00000361293 COL2A1P02458 1487 aaPredicted RBP22.35■■□□□ 1.17
CHD1L-201ENST00000361293 NPHP3-ACAD11A0A0J9YXS1 232 aa22.34■■□□□ 1.17
CHD1L-201ENST00000361293 FAM86B1E9PN63 330 aa22.34■■□□□ 1.17
CHD1L-201ENST00000361293 NDUFA10O95299 355 aa22.34■■□□□ 1.17
CHD1L-201ENST00000361293 FAM86B2P0C5J1 330 aa22.34■■□□□ 1.17
CHD1L-201ENST00000361293 H2AFXP16104 143 aaPredicted RBP22.34■■□□□ 1.17
CHD1L-201ENST00000361293 SPIRE1Q08AE8 756 aa22.34■■□□□ 1.17
CHD1L-201ENST00000361293 UBXN4Q92575 508 aa22.34■■□□□ 1.17
CHD1L-201ENST00000361293 NAP1L4Q99733 375 aaKnown RBP22.34■■□□□ 1.17
CHD1L-201ENST00000361293 EPN1Q9Y6I3 576 aaPredicted RBP22.34■■□□□ 1.17
CHD1L-201ENST00000361293 PPP2R3AQ06190 1150 aa22.34■■□□□ 1.17
CHD1L-201ENST00000361293 RAD51AP2Q09MP3 1159 aa22.34■■□□□ 1.17
CHD1L-201ENST00000361293 LRRC55Q6ZSA7 311 aa22.34■■□□□ 1.17
CHD1L-201ENST00000361293 TBC1D7Q9P0N9 293 aa22.34■■□□□ 1.17
CHD1L-201ENST00000361293 TRIM10Q9UDY6 481 aa22.34■■□□□ 1.17
CHD1L-201ENST00000361293 PRR12Q9ULL5 1215 aa22.34■■□□□ 1.17
CHD1L-201ENST00000361293 BTNL9Q6UXG8 535 aa22.33■■□□□ 1.17
CHD1L-201ENST00000361293 SLC35F6Q8N357 371 aa22.33■■□□□ 1.17
CHD1L-201ENST00000361293 GMLQ99445 158 aa22.33■■□□□ 1.17
CHD1L-201ENST00000361293 NT5C3AQ9H0P0 336 aa22.33■■□□□ 1.17
CHD1L-201ENST00000361293 ZNF446Q9NWS9 450 aa22.33■■□□□ 1.17
CHD1L-201ENST00000361293 ZNF70Q9UC06 446 aaPredicted RBP22.33■■□□□ 1.17
CHD1L-201ENST00000361293 TFR2Q9UP52 801 aa22.33■■□□□ 1.17
CHD1L-201ENST00000361293 KDM3AQ9Y4C1 1321 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 201.5 ms