RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 ISM2Q6H9L7 571 aa15.59■□□□□ 0.09
CSNK1E-201ENST00000359867 NEK8Q86SG6 692 aa15.59■□□□□ 0.09
CSNK1E-201ENST00000359867 SLF1Q9BQI6 1058 aa15.59■□□□□ 0.09
CSNK1E-201ENST00000359867 PARP14Q460N5 1801 aa15.59■□□□□ 0.09
CSNK1E-201ENST00000359867 UNCXA6NJT0 531 aa15.59■□□□□ 0.09
CSNK1E-201ENST00000359867 PRR29P0C7W0 189 aa15.59■□□□□ 0.09
CSNK1E-201ENST00000359867 ZNF157P51786 506 aaPredicted RBP15.59■□□□□ 0.09
CSNK1E-201ENST00000359867 MYL5Q02045 173 aa15.59■□□□□ 0.09
CSNK1E-201ENST00000359867 MOGSQ13724 837 aa15.59■□□□□ 0.09
CSNK1E-201ENST00000359867 E2F4Q16254 413 aa15.59■□□□□ 0.09
CSNK1E-201ENST00000359867 FAM160B2Q86V87 743 aa15.59■□□□□ 0.09
CSNK1E-201ENST00000359867 ABT1Q9ULW3 272 aaKnown RBP15.59■□□□□ 0.09
CSNK1E-201ENST00000359867 PCNTO95613 3336 aa15.59■□□□□ 0.09
CSNK1E-201ENST00000359867 LOC285556D6RIA3 1793 aa15.59■□□□□ 0.09
CSNK1E-201ENST00000359867 PRPF38AQ8NAV1 312 aaKnown RBP15.58■□□□□ 0.08
CSNK1E-201ENST00000359867 ATG4CQ96DT6 458 aa15.58■□□□□ 0.08
CSNK1E-201ENST00000359867 GSDMAQ96QA5 445 aa15.58■□□□□ 0.08
CSNK1E-201ENST00000359867 RLFQ13129 1914 aa15.58■□□□□ 0.08
CSNK1E-201ENST00000359867 SNAPC2Q13487 334 aa15.58■□□□□ 0.08
CSNK1E-201ENST00000359867 SPRYD7Q5W111 196 aa15.58■□□□□ 0.08
CSNK1E-201ENST00000359867 CATSPERGQ6ZRH7 1159 aa15.58■□□□□ 0.08
CSNK1E-201ENST00000359867 GLT8D2Q9H1C3 349 aa15.58■□□□□ 0.08
CSNK1E-201ENST00000359867 RIC8AQ9NPQ8 531 aa15.58■□□□□ 0.08
CSNK1E-201ENST00000359867 PPP1R9AQ9ULJ8 1098 aa15.58■□□□□ 0.08
CSNK1E-201ENST00000359867 PEX10O60683 326 aa15.57■□□□□ 0.08
CSNK1E-201ENST00000359867 BMP6P22004 513 aa15.57■□□□□ 0.08
CSNK1E-201ENST00000359867 BRD2P25440 801 aaKnown RBP15.57■□□□□ 0.08
CSNK1E-201ENST00000359867 MS4A4AQ96JQ5 239 aa15.57■□□□□ 0.08
CSNK1E-201ENST00000359867 AK8Q96MA6 479 aa15.57■□□□□ 0.08
CSNK1E-201ENST00000359867 PAXBP1Q9Y5B6 917 aa15.57■□□□□ 0.08
CSNK1E-201ENST00000359867 PLA2G6O60733 806 aa15.57■□□□□ 0.08
CSNK1E-201ENST00000359867 CCZ1BP86790 482 aa15.57■□□□□ 0.08
CSNK1E-201ENST00000359867 CCZ1P86791 482 aaPredicted RBP15.57■□□□□ 0.08
CSNK1E-201ENST00000359867 DPYDQ12882 1025 aa15.57■□□□□ 0.08
CSNK1E-201ENST00000359867 GRM1Q13255 1194 aa15.57■□□□□ 0.08
CSNK1E-201ENST00000359867 PTPN14Q15678 1187 aa15.57■□□□□ 0.08
CSNK1E-201ENST00000359867 RASAL3Q86YV0 1011 aa15.57■□□□□ 0.08
CSNK1E-201ENST00000359867 GRAMD1CQ8IYS0 662 aa15.57■□□□□ 0.08
CSNK1E-201ENST00000359867 CPXCR1Q8N123 301 aa15.57■□□□□ 0.08
CSNK1E-201ENST00000359867 PROCA1Q8NCQ7 364 aaPredicted RBP15.57■□□□□ 0.08
CSNK1E-201ENST00000359867 CCSER1Q9C0I3 900 aa15.57■□□□□ 0.08
CSNK1E-201ENST00000359867 TMEM60Q9H2L4 133 aa15.57■□□□□ 0.08
CSNK1E-201ENST00000359867 BIN2Q9UBW5 565 aaPredicted RBP15.57■□□□□ 0.08
CSNK1E-201ENST00000359867 ZNF215Q9UL58 517 aaPredicted RBP15.57■□□□□ 0.08
CSNK1E-201ENST00000359867 TMEM88BA6NKF7 163 aa15.56■□□□□ 0.08
CSNK1E-201ENST00000359867 USP17L15C9J2P7 530 aa15.56■□□□□ 0.08
CSNK1E-201ENST00000359867 USP17L13C9JLJ4 530 aa15.56■□□□□ 0.08
CSNK1E-201ENST00000359867 USP17L11C9JVI0 530 aa15.56■□□□□ 0.08
CSNK1E-201ENST00000359867 USP17L18D6R9N7 530 aa15.56■□□□□ 0.08
CSNK1E-201ENST00000359867 USP17L22D6RA61 530 aa15.56■□□□□ 0.08
CSNK1E-201ENST00000359867 USP17L17D6RBQ6 530 aa15.56■□□□□ 0.08
CSNK1E-201ENST00000359867 USP17L19D6RCP7 530 aa15.56■□□□□ 0.08
CSNK1E-201ENST00000359867 USP17L20D6RJB6 530 aa15.56■□□□□ 0.08
CSNK1E-201ENST00000359867 USP17L24Q0WX57 530 aa15.56■□□□□ 0.08
CSNK1E-201ENST00000359867 RGMBQ6NW40 437 aa15.56■□□□□ 0.08
CSNK1E-201ENST00000359867 TBCKQ8TEA7 893 aa15.56■□□□□ 0.08
CSNK1E-201ENST00000359867 RANBP17Q9H2T7 1088 aaKnown RBP15.56■□□□□ 0.08
CSNK1E-201ENST00000359867 PCDHA1Q9Y5I3 950 aa15.56■□□□□ 0.08
CSNK1E-201ENST00000359867 TLL2Q9Y6L7 1015 aa15.56■□□□□ 0.08
CSNK1E-201ENST00000359867 COL11A1P12107 1806 aaPredicted RBP15.56■□□□□ 0.08
CSNK1E-201ENST00000359867 CCL15-CCL14A0A0B4J2E2 113 aa15.56■□□□□ 0.08
CSNK1E-201ENST00000359867 CCNT1O60563 726 aaKnown RBP15.56■□□□□ 0.08
CSNK1E-201ENST00000359867 OR52Z1P0C646 297 aa15.56■□□□□ 0.08
CSNK1E-201ENST00000359867 ERCC5P28715 1186 aaPredicted RBP15.56■□□□□ 0.08
CSNK1E-201ENST00000359867 MRPL12P52815 198 aaKnown RBP15.56■□□□□ 0.08
CSNK1E-201ENST00000359867 CCL15Q16663 113 aa15.56■□□□□ 0.08
CSNK1E-201ENST00000359867 LETM2Q2VYF4 491 aa15.56■□□□□ 0.08
CSNK1E-201ENST00000359867 PDXDC2PQ6P474 469 aa15.56■□□□□ 0.08
CSNK1E-201ENST00000359867 TRERF1Q96PN7 1200 aa15.56■□□□□ 0.08
CSNK1E-201ENST00000359867 AGTPBP1Q9UPW5 1226 aa15.56■□□□□ 0.08
CSNK1E-201ENST00000359867 NEMFO60524 1076 aa15.55■□□□□ 0.08
CSNK1E-201ENST00000359867 AFMP43652 599 aa15.55■□□□□ 0.08
CSNK1E-201ENST00000359867 COG2Q14746 738 aa15.55■□□□□ 0.08
CSNK1E-201ENST00000359867 JAKMIP3Q5VZ66 844 aa15.55■□□□□ 0.08
CSNK1E-201ENST00000359867 GPAT2Q6NUI2 795 aa15.55■□□□□ 0.08
CSNK1E-201ENST00000359867 FBXO11Q86XK2 927 aa15.55■□□□□ 0.08
CSNK1E-201ENST00000359867 ENOX1Q8TC92 643 aaKnown RBP15.55■□□□□ 0.08
CSNK1E-201ENST00000359867 BRI3BPQ8WY22 251 aa15.55■□□□□ 0.08
CSNK1E-201ENST00000359867 CUL5Q93034 780 aa15.55■□□□□ 0.08
CSNK1E-201ENST00000359867 AGBL1Q96MI9 1066 aa15.55■□□□□ 0.08
CSNK1E-201ENST00000359867 AMNQ9BXJ7 453 aa15.55■□□□□ 0.08
CSNK1E-201ENST00000359867 RAVER2Q9HCJ3 691 aaKnown RBP15.55■□□□□ 0.08
CSNK1E-201ENST00000359867 RNF216Q9NWF9 866 aaPredicted RBP15.55■□□□□ 0.08
CSNK1E-201ENST00000359867 SPDYE16A6NNV3 312 aaPredicted RBP15.55■□□□□ 0.08
CSNK1E-201ENST00000359867 GTPBP6O43824 516 aaPredicted RBP15.55■□□□□ 0.08
CSNK1E-201ENST00000359867 DSG3P32926 999 aa15.55■□□□□ 0.08
CSNK1E-201ENST00000359867 CLK2P49760 499 aaKnown RBP15.55■□□□□ 0.08
CSNK1E-201ENST00000359867 FSTL1Q12841 308 aa15.55■□□□□ 0.08
CSNK1E-201ENST00000359867 HSD3B7Q9H2F3 369 aa15.55■□□□□ 0.08
CSNK1E-201ENST00000359867 SLC38A10Q9HBR0 1119 aa15.55■□□□□ 0.08
CSNK1E-201ENST00000359867 OGFRQ9NZT2 677 aa15.55■□□□□ 0.08
CSNK1E-201ENST00000359867 IMPACTQ9P2X3 320 aa15.55■□□□□ 0.08
CSNK1E-201ENST00000359867 ZNF536O15090 1300 aa15.55■□□□□ 0.08
CSNK1E-201ENST00000359867 VWA5AO00534 786 aa15.54■□□□□ 0.08
CSNK1E-201ENST00000359867 ZBTB48P10074 688 aaPredicted RBP15.54■□□□□ 0.08
CSNK1E-201ENST00000359867 GTF2A2P52657 109 aa15.54■□□□□ 0.08
CSNK1E-201ENST00000359867 DHX8Q14562 1220 aaKnown RBP15.54■□□□□ 0.08
CSNK1E-201ENST00000359867 POTEEQ6S8J3 1075 aa15.54■□□□□ 0.08
CSNK1E-201ENST00000359867 FASTKD5Q7L8L6 764 aaKnown RBP15.54■□□□□ 0.08
CSNK1E-201ENST00000359867 ASCC2Q9H1I8 757 aaPredicted RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms