RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 CERS3Q8IU89 383 aa11.56□□□□□ -0.56
SMPD4-201ENST00000351288 NOA1Q8NC60 698 aaKnown RBP11.56□□□□□ -0.56
SMPD4-201ENST00000351288 ACER1Q8TDN7 264 aa11.56□□□□□ -0.56
SMPD4-201ENST00000351288 JADE2Q9NQC1 790 aa11.56□□□□□ -0.56
SMPD4-201ENST00000351288 TIAM2Q8IVF5 1701 aa11.56□□□□□ -0.56
SMPD4-201ENST00000351288 PSMD14O00487 310 aa11.56□□□□□ -0.56
SMPD4-201ENST00000351288 PBX1P40424 430 aa11.56□□□□□ -0.56
SMPD4-201ENST00000351288 KCNJ6P48051 423 aa11.56□□□□□ -0.56
SMPD4-201ENST00000351288 PPARDQ03181 441 aa11.56□□□□□ -0.56
SMPD4-201ENST00000351288 SPAG1Q07617 926 aa11.56□□□□□ -0.56
SMPD4-201ENST00000351288 GPATCH4Q5T3I0 446 aaKnown RBP11.56□□□□□ -0.56
SMPD4-201ENST00000351288 CNGA4Q8IV77 575 aa11.56□□□□□ -0.56
SMPD4-201ENST00000351288 RGS22Q8NE09 1264 aa11.56□□□□□ -0.56
SMPD4-201ENST00000351288 MTA3Q9BTC8 594 aa11.56□□□□□ -0.56
SMPD4-201ENST00000351288 AMNQ9BXJ7 453 aa11.56□□□□□ -0.56
SMPD4-201ENST00000351288 RWDD2AQ9UIY3 292 aa11.56□□□□□ -0.56
SMPD4-201ENST00000351288 PNMA6FA0A0J9YX94 578 aa11.55□□□□□ -0.56
SMPD4-201ENST00000351288 POTEB3A0JP26 581 aa11.55□□□□□ -0.56
SMPD4-201ENST00000351288 POTECB2RU33 542 aa11.55□□□□□ -0.56
SMPD4-201ENST00000351288 ZBTB22O15209 634 aa11.55□□□□□ -0.56
SMPD4-201ENST00000351288 SLC37A4O43826 429 aa11.55□□□□□ -0.56
SMPD4-201ENST00000351288 TRAPPC10P48553 1259 aa11.55□□□□□ -0.56
SMPD4-201ENST00000351288 APBA1Q02410 837 aa11.55□□□□□ -0.56
SMPD4-201ENST00000351288 POTEBQ6S5H4 581 aa11.55□□□□□ -0.56
SMPD4-201ENST00000351288 LARP4BQ92615 738 aaKnown RBP11.55□□□□□ -0.56
SMPD4-201ENST00000351288 PANX2Q96RD6 677 aa11.55□□□□□ -0.56
SMPD4-201ENST00000351288 ZNF408Q9H9D4 720 aa11.55□□□□□ -0.56
SMPD4-201ENST00000351288 JMJD4Q9H9V9 463 aa11.55□□□□□ -0.56
SMPD4-201ENST00000351288 PCDHB13Q9Y5F0 798 aa11.55□□□□□ -0.56
SMPD4-201ENST00000351288 NPHP3-ACAD11A0A0J9YXS1 232 aa11.55□□□□□ -0.56
SMPD4-201ENST00000351288 FLOT1O75955 427 aa11.55□□□□□ -0.56
SMPD4-201ENST00000351288 CC2D1AQ6P1N0 951 aaPredicted RBP11.55□□□□□ -0.56
SMPD4-201ENST00000351288 GSPT2Q8IYD1 628 aaKnown RBP11.55□□□□□ -0.56
SMPD4-201ENST00000351288 CCDC17Q96LX7 622 aa11.55□□□□□ -0.56
SMPD4-201ENST00000351288 TUBGCP2Q9BSJ2 902 aa11.55□□□□□ -0.56
SMPD4-201ENST00000351288 ARAP2Q8WZ64 1704 aa11.55□□□□□ -0.56
SMPD4-201ENST00000351288 CTAGE9A4FU28 777 aa11.55□□□□□ -0.56
SMPD4-201ENST00000351288 ZBTB5O15062 677 aa11.55□□□□□ -0.56
SMPD4-201ENST00000351288 ZNF185O15231 689 aa11.55□□□□□ -0.56
SMPD4-201ENST00000351288 N4BP1O75113 896 aaKnown RBP11.55□□□□□ -0.56
SMPD4-201ENST00000351288 TBC1D8O95759 1140 aa11.55□□□□□ -0.56
SMPD4-201ENST00000351288 NDUFB10O96000 172 aa11.55□□□□□ -0.56
SMPD4-201ENST00000351288 IL1R1P14778 569 aa11.55□□□□□ -0.56
SMPD4-201ENST00000351288 OAS2P29728 719 aaKnown RBP11.55□□□□□ -0.56
SMPD4-201ENST00000351288 ZNF543Q08ER8 600 aa11.55□□□□□ -0.56
SMPD4-201ENST00000351288 R3HDM1Q15032 1099 aaKnown RBP11.55□□□□□ -0.56
SMPD4-201ENST00000351288 TMEM132AQ24JP5 1023 aa11.55□□□□□ -0.56
SMPD4-201ENST00000351288 TMC4Q7Z404 712 aa11.55□□□□□ -0.56
SMPD4-201ENST00000351288 ERMNQ8TAM6 284 aa11.55□□□□□ -0.56
SMPD4-201ENST00000351288 ZNF341Q9BYN7 854 aa11.55□□□□□ -0.56
SMPD4-201ENST00000351288 REXO2Q9Y3B8 237 aaKnown RBP11.55□□□□□ -0.56
SMPD4-201ENST00000351288 A0A1B0GUL6 1792 aa11.54□□□□□ -0.56
SMPD4-201ENST00000351288 POTEFA5A3E0 1075 aa11.54□□□□□ -0.56
SMPD4-201ENST00000351288 PALM3A6NDB9 673 aaPredicted RBP11.54□□□□□ -0.56
SMPD4-201ENST00000351288 KLRC4O43908 158 aa11.54□□□□□ -0.56
SMPD4-201ENST00000351288 POTEIP0CG38 1075 aa11.54□□□□□ -0.56
SMPD4-201ENST00000351288 RAPGEF1Q13905 1077 aa11.54□□□□□ -0.56
SMPD4-201ENST00000351288 CCDC122Q5T0U0 273 aa11.54□□□□□ -0.56
SMPD4-201ENST00000351288 APOBEC3HQ6NTF7 200 aaKnown RBP11.54□□□□□ -0.56
SMPD4-201ENST00000351288 POTEGQ6S5H5 508 aa11.54□□□□□ -0.56
SMPD4-201ENST00000351288 POTEEQ6S8J3 1075 aa11.54□□□□□ -0.56
SMPD4-201ENST00000351288 ARHGAP27Q6ZUM4 889 aa11.54□□□□□ -0.56
SMPD4-201ENST00000351288 SAMD7Q7Z3H4 446 aa11.54□□□□□ -0.56
SMPD4-201ENST00000351288 ADSSL1Q8N142 457 aa11.54□□□□□ -0.56
SMPD4-201ENST00000351288 GOLGA1Q92805 767 aa11.54□□□□□ -0.56
SMPD4-201ENST00000351288 SPAG5Q96R06 1193 aa11.54□□□□□ -0.56
SMPD4-201ENST00000351288 GTPBP4Q9BZE4 634 aaKnown RBP11.54□□□□□ -0.56
SMPD4-201ENST00000351288 ARFGAP3Q9NP61 516 aa11.54□□□□□ -0.56
SMPD4-201ENST00000351288 SMARCAL1Q9NZC9 954 aa11.54□□□□□ -0.56
SMPD4-201ENST00000351288 SWAP70Q9UH65 585 aa11.54□□□□□ -0.56
SMPD4-201ENST00000351288 EPN1Q9Y6I3 576 aaPredicted RBP11.54□□□□□ -0.56
SMPD4-201ENST00000351288 RCCD1A6NED2 376 aa11.54□□□□□ -0.56
SMPD4-201ENST00000351288 TNNT3P45378 269 aaPredicted RBP11.54□□□□□ -0.56
SMPD4-201ENST00000351288 CTTNQ14247 550 aaKnown RBP11.54□□□□□ -0.56
SMPD4-201ENST00000351288 CNOT6LQ96LI5 555 aaKnown RBP11.54□□□□□ -0.56
SMPD4-201ENST00000351288 CCDC42Q96M95 316 aa11.54□□□□□ -0.56
SMPD4-201ENST00000351288 ANO3Q9BYT9 981 aa11.54□□□□□ -0.56
SMPD4-201ENST00000351288 LACRTQ9GZZ8 138 aa11.54□□□□□ -0.56
SMPD4-201ENST00000351288 PLCH1Q4KWH8 1693 aa11.54□□□□□ -0.56
SMPD4-201ENST00000351288 TESPA1A2RU30 521 aaPredicted RBP11.54□□□□□ -0.56
SMPD4-201ENST00000351288 FAM13AO94988 1023 aa11.54□□□□□ -0.56
SMPD4-201ENST00000351288 GCNT3O95395 438 aa11.54□□□□□ -0.56
SMPD4-201ENST00000351288 CXCR5P32302 372 aa11.54□□□□□ -0.56
SMPD4-201ENST00000351288 MAPK8IP2Q13387 824 aaPredicted RBP11.54□□□□□ -0.56
SMPD4-201ENST00000351288 CNNM4Q6P4Q7 775 aa11.54□□□□□ -0.56
SMPD4-201ENST00000351288 KCNK18Q7Z418 384 aa11.54□□□□□ -0.56
SMPD4-201ENST00000351288 CDAN1Q8IWY9 1227 aa11.54□□□□□ -0.56
SMPD4-201ENST00000351288 MB21D1Q8N884 522 aa11.54□□□□□ -0.56
SMPD4-201ENST00000351288 EPHB6O15197 1021 aa11.53□□□□□ -0.56
SMPD4-201ENST00000351288 CLIC2O15247 247 aa11.53□□□□□ -0.56
SMPD4-201ENST00000351288 NDUFA10O95299 355 aa11.53□□□□□ -0.56
SMPD4-201ENST00000351288 HMGB2P26583 209 aaKnown RBP11.53□□□□□ -0.56
SMPD4-201ENST00000351288 CYP26C1Q6V0L0 522 aa11.53□□□□□ -0.56
SMPD4-201ENST00000351288 DNAAF5Q86Y56 855 aa11.53□□□□□ -0.56
SMPD4-201ENST00000351288 SUPT20HQ8NEM7 779 aa11.53□□□□□ -0.56
SMPD4-201ENST00000351288 DHX36Q9H2U1 1008 aaKnown RBP11.53□□□□□ -0.56
SMPD4-201ENST00000351288 LIMA1Q9UHB6 759 aaKnown RBP11.53□□□□□ -0.56
SMPD4-201ENST00000351288 ARHGAP25P42331 645 aa11.53□□□□□ -0.56
SMPD4-201ENST00000351288 NOP2P46087 812 aaKnown RBP11.53□□□□□ -0.56
SMPD4-201ENST00000351288 NBPF9Q3BBW0 867 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms