RNA–Protein interactions for RNA: ENST00000347691.9

TRAPPC6B-202, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC6B, Length 3,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-202ENST00000347691 VEGFAP15692 232 aaPredicted RBP11.18□□□□□ -0.62
TRAPPC6B-202ENST00000347691 CRKLP46109 303 aaKnown RBP11.18□□□□□ -0.62
TRAPPC6B-202ENST00000347691 LIG3P49916 1009 aa11.18□□□□□ -0.62
TRAPPC6B-202ENST00000347691 CLEC4GQ6UXB4 293 aa11.18□□□□□ -0.62
TRAPPC6B-202ENST00000347691 KIAA0895Q8NCT3 520 aa11.18□□□□□ -0.62
TRAPPC6B-202ENST00000347691 SMCR8Q8TEV9 937 aaPredicted RBP11.18□□□□□ -0.62
TRAPPC6B-202ENST00000347691 HDAC7Q8WUI4 952 aa11.18□□□□□ -0.62
TRAPPC6B-202ENST00000347691 TLR10Q9BXR5 811 aa11.18□□□□□ -0.62
TRAPPC6B-202ENST00000347691 MKNK2Q9HBH9 465 aa11.18□□□□□ -0.62
TRAPPC6B-202ENST00000347691 GNA14O95837 355 aa11.18□□□□□ -0.62
TRAPPC6B-202ENST00000347691 PLEKP08567 350 aaPredicted RBP11.18□□□□□ -0.62
TRAPPC6B-202ENST00000347691 EZH2Q15910 746 aaKnown RBP11.18□□□□□ -0.62
TRAPPC6B-202ENST00000347691 TDRD12Q587J7 1177 aaKnown RBP11.18□□□□□ -0.62
TRAPPC6B-202ENST00000347691 TTMPQ5BVD1 217 aa11.18□□□□□ -0.62
TRAPPC6B-202ENST00000347691 CERS3Q8IU89 383 aa11.18□□□□□ -0.62
TRAPPC6B-202ENST00000347691 ZNF444Q8N0Y2 327 aaPredicted RBP11.18□□□□□ -0.62
TRAPPC6B-202ENST00000347691 CNPY4Q8N129 248 aa11.18□□□□□ -0.62
TRAPPC6B-202ENST00000347691 C3orf20Q8ND61 904 aa11.18□□□□□ -0.62
TRAPPC6B-202ENST00000347691 ZIM3Q96PE6 472 aa11.18□□□□□ -0.62
TRAPPC6B-202ENST00000347691 EPN3Q9H201 632 aa11.18□□□□□ -0.62
TRAPPC6B-202ENST00000347691 SEC63Q9UGP8 760 aaKnown RBP11.18□□□□□ -0.62
TRAPPC6B-202ENST00000347691 MINPP1Q9UNW1 487 aa11.18□□□□□ -0.62
TRAPPC6B-202ENST00000347691 PALM3A6NDB9 673 aaPredicted RBP11.17□□□□□ -0.62
TRAPPC6B-202ENST00000347691 TSPY3P0CV98 308 aa11.17□□□□□ -0.62
TRAPPC6B-202ENST00000347691 TSPY8P0CW00 308 aa11.17□□□□□ -0.62
TRAPPC6B-202ENST00000347691 HIBADHP31937 336 aaKnown RBP11.17□□□□□ -0.62
TRAPPC6B-202ENST00000347691 SLC7A5Q01650 507 aa11.17□□□□□ -0.62
TRAPPC6B-202ENST00000347691 DRP2Q13474 957 aa11.17□□□□□ -0.62
TRAPPC6B-202ENST00000347691 IFI16Q16666 785 aaKnown RBP11.17□□□□□ -0.62
TRAPPC6B-202ENST00000347691 ASTE1Q2TB18 679 aaPredicted RBP11.17□□□□□ -0.62
TRAPPC6B-202ENST00000347691 LETM2Q2VYF4 491 aa11.17□□□□□ -0.62
TRAPPC6B-202ENST00000347691 C12orf60Q5U649 245 aa11.17□□□□□ -0.62
TRAPPC6B-202ENST00000347691 KLHDC7AQ5VTJ3 777 aa11.17□□□□□ -0.62
TRAPPC6B-202ENST00000347691 SFMBT2Q5VUG0 894 aa11.17□□□□□ -0.62
TRAPPC6B-202ENST00000347691 LRIG3Q6UXM1 1119 aa11.17□□□□□ -0.62
TRAPPC6B-202ENST00000347691 IQCKQ8N0W5 287 aa11.17□□□□□ -0.62
TRAPPC6B-202ENST00000347691 STAG2Q8N3U4 1231 aa11.17□□□□□ -0.62
TRAPPC6B-202ENST00000347691 TSEN2Q8NCE0 465 aaKnown RBP11.17□□□□□ -0.62
TRAPPC6B-202ENST00000347691 ZNF384Q8TF68 577 aa11.17□□□□□ -0.62
TRAPPC6B-202ENST00000347691 BAP1Q92560 729 aa11.17□□□□□ -0.62
TRAPPC6B-202ENST00000347691 RBM12Q9NTZ6 932 aaKnown RBP11.17□□□□□ -0.62
TRAPPC6B-202ENST00000347691 XIRP1Q702N8 1843 aaKnown RBP11.17□□□□□ -0.62
TRAPPC6B-202ENST00000347691 ESYT2A0FGR8 921 aa11.17□□□□□ -0.62
TRAPPC6B-202ENST00000347691 ANKRD65E5RJM6 399 aa11.17□□□□□ -0.62
TRAPPC6B-202ENST00000347691 H0YHG0 523 aa11.17□□□□□ -0.62
TRAPPC6B-202ENST00000347691 ADAMTS3O15072 1205 aa11.17□□□□□ -0.62
TRAPPC6B-202ENST00000347691 RGL2O15211 777 aa11.17□□□□□ -0.62
TRAPPC6B-202ENST00000347691 MEFVO15553 781 aaPredicted RBP11.17□□□□□ -0.62
TRAPPC6B-202ENST00000347691 HEXIM1O94992 359 aaKnown RBP11.17□□□□□ -0.62
TRAPPC6B-202ENST00000347691 FSBPO95073 299 aa11.17□□□□□ -0.62
TRAPPC6B-202ENST00000347691 C10orf76Q5T2E6 689 aa11.17□□□□□ -0.62
TRAPPC6B-202ENST00000347691 DZIP1Q86YF9 867 aaKnown RBP11.17□□□□□ -0.62
TRAPPC6B-202ENST00000347691 LARP4BQ92615 738 aaKnown RBP11.17□□□□□ -0.62
TRAPPC6B-202ENST00000347691 TAF4BQ92750 862 aa11.17□□□□□ -0.62
TRAPPC6B-202ENST00000347691 CCDC43Q96MW1 224 aaKnown RBP11.17□□□□□ -0.62
TRAPPC6B-202ENST00000347691 MYCBPQ99417 103 aaPredicted RBP11.17□□□□□ -0.62
TRAPPC6B-202ENST00000347691 NCAPGQ9BPX3 1015 aa11.17□□□□□ -0.62
TRAPPC6B-202ENST00000347691 SLC39A2Q9NP94 309 aa11.17□□□□□ -0.62
TRAPPC6B-202ENST00000347691 NR1D1P20393 614 aa11.16□□□□□ -0.62
TRAPPC6B-202ENST00000347691 FXR2P51116 673 aaKnown RBP eCLIP11.16□□□□□ -0.62
TRAPPC6B-202ENST00000347691 GSTO1P78417 241 aa11.16□□□□□ -0.62
TRAPPC6B-202ENST00000347691 PLCB4Q15147 1175 aa11.16□□□□□ -0.62
TRAPPC6B-202ENST00000347691 SKIDA1Q1XH10 827 aa11.16□□□□□ -0.62
TRAPPC6B-202ENST00000347691 RPAINQ86UA6 219 aa11.16□□□□□ -0.62
TRAPPC6B-202ENST00000347691 ARL8AQ96BM9 186 aa11.16□□□□□ -0.62
TRAPPC6B-202ENST00000347691 TACO1Q9BSH4 297 aaKnown RBP11.16□□□□□ -0.62
TRAPPC6B-202ENST00000347691 CYP2D6P10635 497 aa11.16□□□□□ -0.62
TRAPPC6B-202ENST00000347691 RASSF7Q02833 373 aa11.16□□□□□ -0.62
TRAPPC6B-202ENST00000347691 PDIA5Q14554 519 aa11.16□□□□□ -0.62
TRAPPC6B-202ENST00000347691 NAB2Q15742 525 aa11.16□□□□□ -0.62
TRAPPC6B-202ENST00000347691 PRPF38AQ8NAV1 312 aaKnown RBP11.16□□□□□ -0.62
TRAPPC6B-202ENST00000347691 ATP6V1G3Q96LB4 118 aa11.16□□□□□ -0.62
TRAPPC6B-202ENST00000347691 CEP63Q96MT8 703 aa11.16□□□□□ -0.62
TRAPPC6B-202ENST00000347691 CDCA7Q9BWT1 371 aaPredicted RBP11.16□□□□□ -0.62
TRAPPC6B-202ENST00000347691 TANGO6Q9C0B7 1094 aa11.16□□□□□ -0.62
TRAPPC6B-202ENST00000347691 IL17RBQ9NRM6 502 aa11.16□□□□□ -0.62
TRAPPC6B-202ENST00000347691 SLAIN2Q9P270 581 aa11.16□□□□□ -0.62
TRAPPC6B-202ENST00000347691 COL14A1Q05707 1796 aaKnown RBP11.16□□□□□ -0.62
TRAPPC6B-202ENST00000347691 SMCO2A6NFE2 343 aa11.16□□□□□ -0.62
TRAPPC6B-202ENST00000347691 ATP6V1AP38606 617 aa11.16□□□□□ -0.62
TRAPPC6B-202ENST00000347691 TECP42680 631 aa11.16□□□□□ -0.62
TRAPPC6B-202ENST00000347691 PDCLQ13371 301 aa11.16□□□□□ -0.62
TRAPPC6B-202ENST00000347691 CUL1Q13616 776 aa11.16□□□□□ -0.62
TRAPPC6B-202ENST00000347691 PPP4R3AQ6IN85 833 aa11.16□□□□□ -0.62
TRAPPC6B-202ENST00000347691 DOT1LQ8TEK3 1739 aa11.16□□□□□ -0.62
TRAPPC6B-202ENST00000347691 LRRC45Q96CN5 670 aa11.16□□□□□ -0.62
TRAPPC6B-202ENST00000347691 CABS1Q96KC9 395 aa11.16□□□□□ -0.62
TRAPPC6B-202ENST00000347691 EPB41L5Q9HCM4 733 aa11.16□□□□□ -0.62
TRAPPC6B-202ENST00000347691 BTNL10A8MVZ5 291 aa11.15□□□□□ -0.62
TRAPPC6B-202ENST00000347691 PPP1R37O75864 691 aa11.15□□□□□ -0.62
TRAPPC6B-202ENST00000347691 BAG3O95817 575 aa11.15□□□□□ -0.62
TRAPPC6B-202ENST00000347691 CXCR5P32302 372 aa11.15□□□□□ -0.62
TRAPPC6B-202ENST00000347691 LSP1P33241 339 aa11.15□□□□□ -0.62
TRAPPC6B-202ENST00000347691 FKBP3Q00688 224 aaKnown RBP11.15□□□□□ -0.62
TRAPPC6B-202ENST00000347691 GUCY2DQ02846 1103 aa11.15□□□□□ -0.62
TRAPPC6B-202ENST00000347691 CDC37Q16543 378 aaPredicted RBP11.15□□□□□ -0.62
TRAPPC6B-202ENST00000347691 LRRC15Q8TF66 581 aa11.15□□□□□ -0.62
TRAPPC6B-202ENST00000347691 BTG4Q9NY30 223 aa11.15□□□□□ -0.62
TRAPPC6B-202ENST00000347691 PCDHGC5Q9Y5F6 944 aa11.15□□□□□ -0.62
TRAPPC6B-202ENST00000347691 COL4A3BPQ9Y5P4 624 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms