RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 ZNF397Q8NF99 534 aaPredicted RBP9.88□□□□□ -0.83
SNCA-201ENST00000336904 UBE2Q2Q8WVN8 375 aa9.88□□□□□ -0.83
SNCA-201ENST00000336904 RHOXF2Q9BQY4 288 aa9.88□□□□□ -0.83
SNCA-201ENST00000336904 MMRN2Q9H8L6 949 aa9.88□□□□□ -0.83
SNCA-201ENST00000336904 RIC8AQ9NPQ8 531 aa9.88□□□□□ -0.83
SNCA-201ENST00000336904 KCND1Q9NSA2 647 aa9.88□□□□□ -0.83
SNCA-201ENST00000336904 FZD1Q9UP38 647 aa9.88□□□□□ -0.83
SNCA-201ENST00000336904 LTBP1Q14766 1721 aa9.88□□□□□ -0.83
SNCA-201ENST00000336904 LGALS16A8MUM7 142 aa9.88□□□□□ -0.83
SNCA-201ENST00000336904 H7C1D1 291 aa9.88□□□□□ -0.83
SNCA-201ENST00000336904 TADA3O75528 432 aa9.88□□□□□ -0.83
SNCA-201ENST00000336904 PRPHP41219 470 aa9.88□□□□□ -0.83
SNCA-201ENST00000336904 PABPC4Q13310 644 aaKnown RBP eCLIP9.88□□□□□ -0.83
SNCA-201ENST00000336904 WDR59Q6PJI9 974 aa9.88□□□□□ -0.83
SNCA-201ENST00000336904 SH2D3AQ9BRG2 576 aa9.88□□□□□ -0.83
SNCA-201ENST00000336904 NLRC4Q9NPP4 1024 aa9.88□□□□□ -0.83
SNCA-201ENST00000336904 FBXO28Q9NVF7 368 aa9.88□□□□□ -0.83
SNCA-201ENST00000336904 BCS1LQ9Y276 419 aa9.88□□□□□ -0.83
SNCA-201ENST00000336904 LUC7L2Q9Y383 392 aaKnown RBP9.88□□□□□ -0.83
SNCA-201ENST00000336904 MYO1BO43795 1136 aa9.87□□□□□ -0.83
SNCA-201ENST00000336904 MED24O75448 989 aa9.87□□□□□ -0.83
SNCA-201ENST00000336904 CFBP00751 764 aa9.87□□□□□ -0.83
SNCA-201ENST00000336904 ZSCAN20P17040 1043 aaPredicted RBP9.87□□□□□ -0.83
SNCA-201ENST00000336904 PTPROQ16827 1216 aa9.87□□□□□ -0.83
SNCA-201ENST00000336904 HHIPL2Q6UWX4 724 aa9.87□□□□□ -0.83
SNCA-201ENST00000336904 MTERF4Q7Z6M4 381 aaKnown RBP9.87□□□□□ -0.83
SNCA-201ENST00000336904 ZDHHC15Q96MV8 337 aa9.87□□□□□ -0.83
SNCA-201ENST00000336904 ANO3Q9BYT9 981 aa9.87□□□□□ -0.83
SNCA-201ENST00000336904 TMEM39BQ9GZU3 492 aa9.87□□□□□ -0.83
SNCA-201ENST00000336904 SUGCTQ9HAC7 445 aa9.87□□□□□ -0.83
SNCA-201ENST00000336904 BMP2KQ9NSY1 1161 aaPredicted RBP9.87□□□□□ -0.83
SNCA-201ENST00000336904 MRFAP1Q9Y605 127 aa9.87□□□□□ -0.83
SNCA-201ENST00000336904 FAM86B1E9PN63 330 aa9.87□□□□□ -0.83
SNCA-201ENST00000336904 KIF5CO60282 957 aa9.87□□□□□ -0.83
SNCA-201ENST00000336904 KRT18P05783 430 aaKnown RBP9.87□□□□□ -0.83
SNCA-201ENST00000336904 FAM86B2P0C5J1 330 aa9.87□□□□□ -0.83
SNCA-201ENST00000336904 CCNE1P24864 410 aa9.87□□□□□ -0.83
SNCA-201ENST00000336904 MIIPQ5JXC2 388 aa9.87□□□□□ -0.83
SNCA-201ENST00000336904 PODNQ7Z5L7 613 aa9.87□□□□□ -0.83
SNCA-201ENST00000336904 KSR1Q8IVT5 923 aa9.87□□□□□ -0.83
SNCA-201ENST00000336904 RAD54LQ92698 747 aa9.87□□□□□ -0.83
SNCA-201ENST00000336904 LACRTQ9GZZ8 138 aa9.87□□□□□ -0.83
SNCA-201ENST00000336904 PLEKHA4Q9H4M7 779 aa9.87□□□□□ -0.83
SNCA-201ENST00000336904 PI4KBQ9UBF8 816 aa9.87□□□□□ -0.83
SNCA-201ENST00000336904 NRXN2Q9P2S2 1712 aa9.87□□□□□ -0.83
SNCA-201ENST00000336904 RSPH10B2B2RC85 870 aa9.86□□□□□ -0.83
SNCA-201ENST00000336904 CCP110O43303 1012 aa9.86□□□□□ -0.83
SNCA-201ENST00000336904 RSPH10BP0C881 870 aa9.86□□□□□ -0.83
SNCA-201ENST00000336904 ARHGAP25P42331 645 aa9.86□□□□□ -0.83
SNCA-201ENST00000336904 KCNJ6P48051 423 aa9.86□□□□□ -0.83
SNCA-201ENST00000336904 CASP5P51878 434 aa9.86□□□□□ -0.83
SNCA-201ENST00000336904 MRPL12P52815 198 aaKnown RBP9.86□□□□□ -0.83
SNCA-201ENST00000336904 TMC4Q7Z404 712 aa9.86□□□□□ -0.83
SNCA-201ENST00000336904 GDAP1L1Q96MZ0 367 aa9.86□□□□□ -0.83
SNCA-201ENST00000336904 RGL1Q9NZL6 768 aa9.86□□□□□ -0.83
SNCA-201ENST00000336904 SWAP70Q9UH65 585 aa9.86□□□□□ -0.83
SNCA-201ENST00000336904 CENPFP49454 3210 aa9.86□□□□□ -0.83
SNCA-201ENST00000336904 DDX39AO00148 427 aaKnown RBP9.86□□□□□ -0.83
SNCA-201ENST00000336904 LAD1O00515 517 aa9.86□□□□□ -0.83
SNCA-201ENST00000336904 MEIS2O14770 477 aa9.86□□□□□ -0.83
SNCA-201ENST00000336904 POLR3GO15318 223 aaPredicted RBP9.86□□□□□ -0.83
SNCA-201ENST00000336904 ZMYND10O75800 440 aa9.86□□□□□ -0.83
SNCA-201ENST00000336904 NDUFA10O95299 355 aa9.86□□□□□ -0.83
SNCA-201ENST00000336904 POLD1P28340 1107 aa9.86□□□□□ -0.83
SNCA-201ENST00000336904 HERVK_113P62684 666 aa9.86□□□□□ -0.83
SNCA-201ENST00000336904 KCNB1Q14721 858 aa9.86□□□□□ -0.83
SNCA-201ENST00000336904 FAM83BQ5T0W9 1011 aa9.86□□□□□ -0.83
SNCA-201ENST00000336904 GPBP1Q86WP2 473 aa9.86□□□□□ -0.83
SNCA-201ENST00000336904 ZNF507Q8TCN5 953 aa9.86□□□□□ -0.83
SNCA-201ENST00000336904 PIGOQ8TEQ8 1089 aa9.86□□□□□ -0.83
SNCA-201ENST00000336904 C7orf25Q9BPX7 421 aa9.86□□□□□ -0.83
SNCA-201ENST00000336904 EPN1Q9Y6I3 576 aaPredicted RBP9.86□□□□□ -0.83
SNCA-201ENST00000336904 TRAF5O00463 557 aa9.85□□□□□ -0.83
SNCA-201ENST00000336904 ZNF185O15231 689 aa9.85□□□□□ -0.83
SNCA-201ENST00000336904 NOVP48745 357 aa9.85□□□□□ -0.83
SNCA-201ENST00000336904 GYS2P54840 703 aa9.85□□□□□ -0.83
SNCA-201ENST00000336904 MAP3K9P80192 1104 aa9.85□□□□□ -0.83
SNCA-201ENST00000336904 SPAG1Q07617 926 aa9.85□□□□□ -0.83
SNCA-201ENST00000336904 COASYQ13057 564 aa9.85□□□□□ -0.83
SNCA-201ENST00000336904 FKBP15Q5T1M5 1219 aa9.85□□□□□ -0.83
SNCA-201ENST00000336904 STRIP1Q5VSL9 837 aa9.85□□□□□ -0.83
SNCA-201ENST00000336904 CYP26C1Q6V0L0 522 aa9.85□□□□□ -0.83
SNCA-201ENST00000336904 MAEAQ7L5Y9 396 aa9.85□□□□□ -0.83
SNCA-201ENST00000336904 CERS3Q8IU89 383 aa9.85□□□□□ -0.83
SNCA-201ENST00000336904 AK8Q96MA6 479 aa9.85□□□□□ -0.83
SNCA-201ENST00000336904 PYM1Q9BRP8 204 aaKnown RBP9.85□□□□□ -0.83
SNCA-201ENST00000336904 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.85□□□□□ -0.83
SNCA-201ENST00000336904 SMARCAL1Q9NZC9 954 aa9.85□□□□□ -0.83
SNCA-201ENST00000336904 LRRC37AA6NMS7 1700 aa9.85□□□□□ -0.83
SNCA-201ENST00000336904 LRRC10BA6NIK2 292 aa9.85□□□□□ -0.83
SNCA-201ENST00000336904 PSMD14O00487 310 aa9.85□□□□□ -0.83
SNCA-201ENST00000336904 CLK2P49760 499 aaKnown RBP9.85□□□□□ -0.83
SNCA-201ENST00000336904 KCNA1Q09470 495 aa9.85□□□□□ -0.83
SNCA-201ENST00000336904 HERC4Q5GLZ8 1057 aaPredicted RBP9.85□□□□□ -0.83
SNCA-201ENST00000336904 CCDC122Q5T0U0 273 aa9.85□□□□□ -0.83
SNCA-201ENST00000336904 GPATCH4Q5T3I0 446 aaKnown RBP9.85□□□□□ -0.83
SNCA-201ENST00000336904 KIAA1328Q86T90 577 aa9.85□□□□□ -0.83
SNCA-201ENST00000336904 CCDC47Q96A33 483 aaKnown RBP9.85□□□□□ -0.83
SNCA-201ENST00000336904 ZCCHC17Q9NP64 241 aaKnown RBP9.85□□□□□ -0.83
SNCA-201ENST00000336904 HOMER2Q9NSB8 354 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms