RNA–Protein interactions for RNA: ENST00000315781.9

SNAP47-201, Transcript of synaptosome associated protein 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNAP47, Length 2,367 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-201ENST00000315781 PAPD7Q5XG87 772 aaKnown RBP20.79■□□□□ 0.92
SNAP47-201ENST00000315781 TMC4Q7Z404 712 aa20.79■□□□□ 0.92
SNAP47-201ENST00000315781 HAS1Q92839 578 aa20.79■□□□□ 0.92
SNAP47-201ENST00000315781 CAPZA3Q96KX2 299 aa20.79■□□□□ 0.92
SNAP47-201ENST00000315781 L1RE1Q9UN81 338 aa20.79■□□□□ 0.92
SNAP47-201ENST00000315781 SIK3Q9Y2K2 1263 aa20.79■□□□□ 0.92
SNAP47-201ENST00000315781 ATP6V0A2Q9Y487 856 aa20.79■□□□□ 0.92
SNAP47-201ENST00000315781 SPATA31A6Q5VVP1 1343 aa20.78■□□□□ 0.92
SNAP47-201ENST00000315781 H3BQF6 201 aa20.78■□□□□ 0.92
SNAP47-201ENST00000315781 EPHB6O15197 1021 aa20.78■□□□□ 0.92
SNAP47-201ENST00000315781 SLURP2P0DP57 97 aa20.78■□□□□ 0.92
SNAP47-201ENST00000315781 MRPL12P52815 198 aaKnown RBP20.78■□□□□ 0.92
SNAP47-201ENST00000315781 MAN2A1Q16706 1144 aa20.78■□□□□ 0.92
SNAP47-201ENST00000315781 C2CD5Q86YS7 1000 aa20.78■□□□□ 0.92
SNAP47-201ENST00000315781 MMS19Q96T76 1030 aa20.78■□□□□ 0.92
SNAP47-201ENST00000315781 MMRN2Q9H8L6 949 aa20.78■□□□□ 0.92
SNAP47-201ENST00000315781 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.78■□□□□ 0.92
SNAP47-201ENST00000315781 ZBTB5O15062 677 aa20.78■□□□□ 0.92
SNAP47-201ENST00000315781 LRRC63Q05C16 580 aa20.78■□□□□ 0.92
SNAP47-201ENST00000315781 SPA17Q15506 151 aa20.78■□□□□ 0.92
SNAP47-201ENST00000315781 GPATCH4Q5T3I0 446 aaKnown RBP20.78■□□□□ 0.92
SNAP47-201ENST00000315781 KRT26Q7Z3Y9 468 aa20.78■□□□□ 0.92
SNAP47-201ENST00000315781 ZBTB9Q96C00 473 aa20.78■□□□□ 0.92
SNAP47-201ENST00000315781 IQCDQ96DY2 449 aa20.78■□□□□ 0.92
SNAP47-201ENST00000315781 UIMC1Q96RL1 719 aa20.78■□□□□ 0.92
SNAP47-201ENST00000315781 LRRC27Q9C0I9 530 aa20.78■□□□□ 0.92
SNAP47-201ENST00000315781 PSTPIP2Q9H939 334 aa20.78■□□□□ 0.92
SNAP47-201ENST00000315781 RNF216Q9NWF9 866 aaPredicted RBP20.78■□□□□ 0.92
SNAP47-201ENST00000315781 ZNF263O14978 683 aa20.77■□□□□ 0.92
SNAP47-201ENST00000315781 RAD21O60216 631 aa20.77■□□□□ 0.92
SNAP47-201ENST00000315781 KIF5AQ12840 1032 aa20.77■□□□□ 0.92
SNAP47-201ENST00000315781 CDC42EP5Q6NZY7 148 aa20.77■□□□□ 0.92
SNAP47-201ENST00000315781 GBP3Q9H0R5 595 aa20.77■□□□□ 0.92
SNAP47-201ENST00000315781 PDE11AQ9HCR9 933 aa20.77■□□□□ 0.92
SNAP47-201ENST00000315781 PLAGL2Q9UPG8 496 aa20.77■□□□□ 0.92
SNAP47-201ENST00000315781 HLA-DOAP06340 250 aa20.77■□□□□ 0.91
SNAP47-201ENST00000315781 VAV2P52735 878 aa20.77■□□□□ 0.91
SNAP47-201ENST00000315781 LRRC55Q6ZSA7 311 aa20.77■□□□□ 0.91
SNAP47-201ENST00000315781 LTBP1Q14766 1721 aa20.76■□□□□ 0.91
SNAP47-201ENST00000315781 SSBP05455 408 aaKnown RBP eCLIP20.76■□□□□ 0.91
SNAP47-201ENST00000315781 TUBBP07437 444 aa20.76■□□□□ 0.91
SNAP47-201ENST00000315781 EHHADHQ08426 723 aa20.76■□□□□ 0.91
SNAP47-201ENST00000315781 PSMD2Q13200 908 aa20.76■□□□□ 0.91
SNAP47-201ENST00000315781 GPIHBP1Q8IV16 184 aa20.76■□□□□ 0.91
SNAP47-201ENST00000315781 TSG101Q99816 390 aa20.76■□□□□ 0.91
SNAP47-201ENST00000315781 PCDHA12Q9UN75 941 aa20.76■□□□□ 0.91
SNAP47-201ENST00000315781 MYO3BQ8WXR4 1341 aa20.76■□□□□ 0.91
SNAP47-201ENST00000315781 HNRNPH3P31942 346 aaKnown RBP20.75■□□□□ 0.91
SNAP47-201ENST00000315781 GYS2P54840 703 aa20.75■□□□□ 0.91
SNAP47-201ENST00000315781 NFIAQ12857 509 aa20.75■□□□□ 0.91
SNAP47-201ENST00000315781 SLC27A3Q5K4L6 730 aa20.75■□□□□ 0.91
SNAP47-201ENST00000315781 CCDC84Q86UT8 332 aaPredicted RBP20.75■□□□□ 0.91
SNAP47-201ENST00000315781 SECISBP2LQ93073 1101 aaKnown RBP20.75■□□□□ 0.91
SNAP47-201ENST00000315781 ARHGAP20Q9P2F6 1191 aa20.75■□□□□ 0.91
SNAP47-201ENST00000315781 ABCB11O95342 1321 aa20.75■□□□□ 0.91
SNAP47-201ENST00000315781 COASYQ13057 564 aa20.75■□□□□ 0.91
SNAP47-201ENST00000315781 GPS2Q13227 327 aa20.75■□□□□ 0.91
SNAP47-201ENST00000315781 MYOCDQ8IZQ8 938 aa20.75■□□□□ 0.91
SNAP47-201ENST00000315781 PURBQ96QR8 312 aaKnown RBP20.75■□□□□ 0.91
SNAP47-201ENST00000315781 TSGA10Q9BZW7 698 aa20.75■□□□□ 0.91
SNAP47-201ENST00000315781 CCDC66A2RUB6 948 aa20.74■□□□□ 0.91
SNAP47-201ENST00000315781 ONECUT3O60422 494 aaPredicted RBP20.74■□□□□ 0.91
SNAP47-201ENST00000315781 APOBEC3HQ6NTF7 200 aaKnown RBP20.74■□□□□ 0.91
SNAP47-201ENST00000315781 WDR93Q6P2C0 686 aa20.74■□□□□ 0.91
SNAP47-201ENST00000315781 RRAGAQ7L523 313 aa20.74■□□□□ 0.91
SNAP47-201ENST00000315781 CAGE1Q8TC20 777 aa20.74■□□□□ 0.91
SNAP47-201ENST00000315781 TEKT1Q969V4 418 aa20.74■□□□□ 0.91
SNAP47-201ENST00000315781 DNAJC19Q96DA6 116 aa20.74■□□□□ 0.91
SNAP47-201ENST00000315781 IFIH1Q9BYX4 1025 aaKnown RBP20.74■□□□□ 0.91
SNAP47-201ENST00000315781 TANGO6Q9C0B7 1094 aa20.74■□□□□ 0.91
SNAP47-201ENST00000315781 DEF6Q9H4E7 631 aa20.74■□□□□ 0.91
SNAP47-201ENST00000315781 JADE2Q9NQC1 790 aa20.74■□□□□ 0.91
SNAP47-201ENST00000315781 AFF2P51816 1311 aa20.74■□□□□ 0.91
SNAP47-201ENST00000315781 LRRC37AA6NMS7 1700 aa20.74■□□□□ 0.91
SNAP47-201ENST00000315781 LRRC53A6NM62 1247 aa20.74■□□□□ 0.91
SNAP47-201ENST00000315781 USP17L15C9J2P7 530 aa20.74■□□□□ 0.91
SNAP47-201ENST00000315781 USP17L13C9JLJ4 530 aa20.74■□□□□ 0.91
SNAP47-201ENST00000315781 USP17L11C9JVI0 530 aa20.74■□□□□ 0.91
SNAP47-201ENST00000315781 USP17L18D6R9N7 530 aa20.74■□□□□ 0.91
SNAP47-201ENST00000315781 USP17L22D6RA61 530 aa20.74■□□□□ 0.91
SNAP47-201ENST00000315781 USP17L17D6RBQ6 530 aa20.74■□□□□ 0.91
SNAP47-201ENST00000315781 USP17L19D6RCP7 530 aa20.74■□□□□ 0.91
SNAP47-201ENST00000315781 USP17L20D6RJB6 530 aa20.74■□□□□ 0.91
SNAP47-201ENST00000315781 G3V3G9 751 aa20.74■□□□□ 0.91
SNAP47-201ENST00000315781 GCFC2P16383 781 aaKnown RBP20.74■□□□□ 0.91
SNAP47-201ENST00000315781 USP14P54578 494 aa20.74■□□□□ 0.91
SNAP47-201ENST00000315781 USP17L24Q0WX57 530 aa20.74■□□□□ 0.91
SNAP47-201ENST00000315781 DCAF8Q5TAQ9 597 aa20.74■□□□□ 0.91
SNAP47-201ENST00000315781 USP17L6PQ6QN14 398 aa20.74■□□□□ 0.91
SNAP47-201ENST00000315781 ZFPM1Q8IX07 1006 aa20.74■□□□□ 0.91
SNAP47-201ENST00000315781 PCDHA13Q9Y5I0 950 aa20.74■□□□□ 0.91
SNAP47-201ENST00000315781 ZNF185O15231 689 aa20.73■□□□□ 0.91
SNAP47-201ENST00000315781 EIF3JO75822 258 aaKnown RBP20.73■□□□□ 0.91
SNAP47-201ENST00000315781 EIF4A3P38919 411 aaKnown RBP20.73■□□□□ 0.91
SNAP47-201ENST00000315781 KIF11P52732 1056 aa20.73■□□□□ 0.91
SNAP47-201ENST00000315781 CKAP4Q07065 602 aaKnown RBP20.73■□□□□ 0.91
SNAP47-201ENST00000315781 CASP8Q14790 479 aa20.73■□□□□ 0.91
SNAP47-201ENST00000315781 SMCR8Q8TEV9 937 aaPredicted RBP20.73■□□□□ 0.91
SNAP47-201ENST00000315781 MTMR8Q96EF0 704 aa20.73■□□□□ 0.91
SNAP47-201ENST00000315781 PANK4Q9NVE7 773 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms