RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 EXOC4Q96A65 974 aa16.74■□□□□ 0.27
HCFC1-201ENST00000310441 LONRF3Q496Y0 759 aa16.74■□□□□ 0.27
HCFC1-201ENST00000310441 NIM1KQ8IY84 436 aa16.74■□□□□ 0.27
HCFC1-201ENST00000310441 PPM1KQ8N3J5 372 aa16.74■□□□□ 0.27
HCFC1-201ENST00000310441 GSDMAQ96QA5 445 aa16.74■□□□□ 0.27
HCFC1-201ENST00000310441 CMA1P23946 247 aa16.74■□□□□ 0.27
HCFC1-201ENST00000310441 HP1BP3Q5SSJ5 553 aaPredicted RBP16.74■□□□□ 0.27
HCFC1-201ENST00000310441 LCA5Q86VQ0 697 aa16.74■□□□□ 0.27
HCFC1-201ENST00000310441 LMCD1Q9NZU5 365 aa16.74■□□□□ 0.27
HCFC1-201ENST00000310441 SNX14Q9Y5W7 946 aa16.74■□□□□ 0.27
HCFC1-201ENST00000310441 CTNND1O60716 968 aaKnown RBP16.74■□□□□ 0.27
HCFC1-201ENST00000310441 FOSP01100 380 aaPredicted RBP16.74■□□□□ 0.27
HCFC1-201ENST00000310441 KAZNQ674X7 775 aa16.74■□□□□ 0.27
HCFC1-201ENST00000310441 STX19Q8N4C7 294 aa16.74■□□□□ 0.27
HCFC1-201ENST00000310441 PGBD1Q96JS3 809 aa16.74■□□□□ 0.27
HCFC1-201ENST00000310441 DIS3Q9Y2L1 958 aaKnown RBP16.74■□□□□ 0.27
HCFC1-201ENST00000310441 TMEM232C9JQI7 657 aa16.73■□□□□ 0.27
HCFC1-201ENST00000310441 DNAAF3Q8N9W5 541 aa16.73■□□□□ 0.27
HCFC1-201ENST00000310441 PARD3BQ8TEW8 1205 aa16.73■□□□□ 0.27
HCFC1-201ENST00000310441 ARHGAP26Q9UNA1 814 aa16.73■□□□□ 0.27
HCFC1-201ENST00000310441 hCG_1984214I3L0E3 225 aa16.73■□□□□ 0.27
HCFC1-201ENST00000310441 FAM95CA0A1B0GW59 222 aa16.73■□□□□ 0.27
HCFC1-201ENST00000310441 ARL4AP40617 200 aa16.73■□□□□ 0.27
HCFC1-201ENST00000310441 METTL23Q86XA0 190 aa16.73■□□□□ 0.27
HCFC1-201ENST00000310441 VPS39Q96JC1 886 aa16.73■□□□□ 0.27
HCFC1-201ENST00000310441 TRIM55Q9BYV6 548 aa16.73■□□□□ 0.27
HCFC1-201ENST00000310441 CDC23Q9UJX2 597 aa16.73■□□□□ 0.27
HCFC1-201ENST00000310441 BLMP54132 1417 aaPredicted RBP16.73■□□□□ 0.27
HCFC1-201ENST00000310441 SBNO1A3KN83 1393 aa16.73■□□□□ 0.27
HCFC1-201ENST00000310441 A0A087WUV0 522 aaPredicted RBP16.73■□□□□ 0.27
HCFC1-201ENST00000310441 VAMP4O75379 141 aa16.73■□□□□ 0.27
HCFC1-201ENST00000310441 SURF1Q15526 300 aa16.73■□□□□ 0.27
HCFC1-201ENST00000310441 CDC37Q16543 378 aaPredicted RBP16.73■□□□□ 0.27
HCFC1-201ENST00000310441 ING2Q9H160 280 aa16.73■□□□□ 0.27
HCFC1-201ENST00000310441 A2MP01023 1474 aa16.73■□□□□ 0.27
HCFC1-201ENST00000310441 GTPBP10A4D1E9 387 aaKnown RBP16.73■□□□□ 0.27
HCFC1-201ENST00000310441 CCDC151A5D8V7 595 aa16.73■□□□□ 0.27
HCFC1-201ENST00000310441 ADAM9Q13443 819 aa16.73■□□□□ 0.27
HCFC1-201ENST00000310441 MAGOHBQ96A72 148 aaKnown RBP16.73■□□□□ 0.27
HCFC1-201ENST00000310441 PCDHB4Q9Y5E5 795 aa16.73■□□□□ 0.27
HCFC1-201ENST00000310441 POC1B-GALNT4F8VUJ3 575 aa16.73■□□□□ 0.27
HCFC1-201ENST00000310441 SPAG7O75391 227 aa16.73■□□□□ 0.27
HCFC1-201ENST00000310441 SERPINI2O75830 405 aa16.73■□□□□ 0.27
HCFC1-201ENST00000310441 TBCCQ15814 346 aa16.73■□□□□ 0.27
HCFC1-201ENST00000310441 NELFCDQ8IXH7 590 aa16.73■□□□□ 0.27
HCFC1-201ENST00000310441 NT5C1BQ96P26 610 aa16.73■□□□□ 0.27
HCFC1-201ENST00000310441 EXOC1LA0A1B0GW35 172 aa16.73■□□□□ 0.27
HCFC1-201ENST00000310441 DLATP10515 647 aaKnown RBP16.73■□□□□ 0.27
HCFC1-201ENST00000310441 RSRC2Q7L4I2 434 aaKnown RBP16.73■□□□□ 0.27
HCFC1-201ENST00000310441 RRP15Q9Y3B9 282 aaKnown RBP16.73■□□□□ 0.27
HCFC1-201ENST00000310441 ATICP31939 592 aa16.72■□□□□ 0.27
HCFC1-201ENST00000310441 CCT5P48643 541 aa16.72■□□□□ 0.27
HCFC1-201ENST00000310441 ACSBG1Q96GR2 724 aa16.72■□□□□ 0.27
HCFC1-201ENST00000310441 SRGAP2CP0DJJ0 459 aa16.72■□□□□ 0.27
HCFC1-201ENST00000310441 IFRD2Q12894 506 aaPredicted RBP16.72■□□□□ 0.27
HCFC1-201ENST00000310441 DYNC1I2Q13409 638 aaKnown RBP16.72■□□□□ 0.27
HCFC1-201ENST00000310441 TSC22D3Q99576 134 aa16.72■□□□□ 0.27
HCFC1-201ENST00000310441 KIF17Q9P2E2 1029 aa16.72■□□□□ 0.27
HCFC1-201ENST00000310441 KCTD6Q8NC69 237 aa16.72■□□□□ 0.27
HCFC1-201ENST00000310441 CDHR1Q96JP9 859 aa16.72■□□□□ 0.27
HCFC1-201ENST00000310441 MAPK4P31152 587 aa16.72■□□□□ 0.27
HCFC1-201ENST00000310441 SLC39A6Q13433 755 aa16.72■□□□□ 0.27
HCFC1-201ENST00000310441 TAF1BQ53T94 588 aaPredicted RBP16.72■□□□□ 0.27
HCFC1-201ENST00000310441 ARMCX5Q6P1M9 558 aa16.72■□□□□ 0.27
HCFC1-201ENST00000310441 RFX6Q8HWS3 928 aa16.72■□□□□ 0.27
HCFC1-201ENST00000310441 DEPDC1BQ8WUY9 529 aa16.72■□□□□ 0.27
HCFC1-201ENST00000310441 SHANK2Q9UPX8 1470 aa16.72■□□□□ 0.27
HCFC1-201ENST00000310441 ABL1P00519 1130 aa16.72■□□□□ 0.27
HCFC1-201ENST00000310441 NT5C2P49902 561 aa16.72■□□□□ 0.27
HCFC1-201ENST00000310441 NCOA5Q9HCD5 579 aaKnown RBP16.72■□□□□ 0.27
HCFC1-201ENST00000310441 OCRLQ01968 901 aa16.72■□□□□ 0.27
HCFC1-201ENST00000310441 MYSM1Q5VVJ2 828 aa16.72■□□□□ 0.27
HCFC1-201ENST00000310441 CATSPER1Q8NEC5 780 aa16.72■□□□□ 0.27
HCFC1-201ENST00000310441 NRBP2Q9NSY0 501 aa16.72■□□□□ 0.27
HCFC1-201ENST00000310441 KAT6AQ92794 2004 aa16.72■□□□□ 0.27
HCFC1-201ENST00000310441 PPP4R3CPQ6ZMV5 832 aa16.72■□□□□ 0.27
HCFC1-201ENST00000310441 DCLK2Q8N568 766 aa16.72■□□□□ 0.27
HCFC1-201ENST00000310441 OLFM3Q96PB7 478 aa16.72■□□□□ 0.27
HCFC1-201ENST00000310441 RNMTO43148 476 aaKnown RBP16.71■□□□□ 0.27
HCFC1-201ENST00000310441 MED21Q13503 144 aa16.71■□□□□ 0.27
HCFC1-201ENST00000310441 TSTA3Q13630 321 aaPredicted RBP16.71■□□□□ 0.27
HCFC1-201ENST00000310441 TMEM60Q9H2L4 133 aa16.71■□□□□ 0.27
HCFC1-201ENST00000310441 PFKFB1P16118 471 aa16.71■□□□□ 0.27
HCFC1-201ENST00000310441 CAV1Q03135 178 aa16.71■□□□□ 0.27
HCFC1-201ENST00000310441 TMEM206Q9H813 350 aa16.71■□□□□ 0.27
HCFC1-201ENST00000310441 SLC38A10Q9HBR0 1119 aa16.71■□□□□ 0.27
HCFC1-201ENST00000310441 INSRP06213 1382 aa16.71■□□□□ 0.27
HCFC1-201ENST00000310441 ARHGAP10A1A4S6 786 aa16.71■□□□□ 0.27
HCFC1-201ENST00000310441 LRMPQ12912 555 aa16.71■□□□□ 0.27
HCFC1-201ENST00000310441 ZNF654Q8IZM8 581 aa16.71■□□□□ 0.27
HCFC1-201ENST00000310441 SNX25Q9H3E2 840 aa16.71■□□□□ 0.27
HCFC1-201ENST00000310441 VPS54Q9P1Q0 977 aa16.71■□□□□ 0.27
HCFC1-201ENST00000310441 CCDC78A2IDD5 438 aa16.71■□□□□ 0.27
HCFC1-201ENST00000310441 XKR9Q5GH70 373 aa16.71■□□□□ 0.27
HCFC1-201ENST00000310441 ABI1Q8IZP0 508 aa16.71■□□□□ 0.27
HCFC1-201ENST00000310441 MRGBPQ9NV56 204 aa16.71■□□□□ 0.27
HCFC1-201ENST00000310441 PSMC2P35998 433 aaKnown RBP16.71■□□□□ 0.27
HCFC1-201ENST00000310441 CENPUQ71F23 418 aa16.71■□□□□ 0.27
HCFC1-201ENST00000310441 TCP11Q8WWU5 503 aa16.71■□□□□ 0.27
HCFC1-201ENST00000310441 CHCHD3Q9NX63 227 aaKnown RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms