RNA–Protein interactions for RNA: ENST00000300853.7

ERCC1-202, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC1, Length 3,828 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-202ENST00000300853 FAM153CQ494X1 144 aa12.99□□□□□ -0.33
ERCC1-202ENST00000300853 NT5DC1Q5TFE4 455 aa12.99□□□□□ -0.33
ERCC1-202ENST00000300853 CEP120Q8N960 986 aa12.99□□□□□ -0.33
ERCC1-202ENST00000300853 FAM153AQ9UHL3 310 aa12.99□□□□□ -0.33
ERCC1-202ENST00000300853 ARAP3Q8WWN8 1544 aa12.99□□□□□ -0.33
ERCC1-202ENST00000300853 OVOS2A0A0J9YW53 1432 aa12.99□□□□□ -0.33
ERCC1-202ENST00000300853 OVOS2Q6IE36 1432 aa12.99□□□□□ -0.33
ERCC1-202ENST00000300853 USP31Q70CQ4 1352 aa12.99□□□□□ -0.33
ERCC1-202ENST00000300853 TRHP20396 242 aaPredicted RBP12.99□□□□□ -0.33
ERCC1-202ENST00000300853 GNAQP50148 359 aa12.99□□□□□ -0.33
ERCC1-202ENST00000300853 ZNF131P52739 623 aa12.99□□□□□ -0.33
ERCC1-202ENST00000300853 RABL6Q3YEC7 729 aaPredicted RBP12.99□□□□□ -0.33
ERCC1-202ENST00000300853 MDM1Q8TC05 714 aa12.99□□□□□ -0.33
ERCC1-202ENST00000300853 STMN2Q93045 179 aa12.99□□□□□ -0.33
ERCC1-202ENST00000300853 GBP5Q96PP8 586 aa12.99□□□□□ -0.33
ERCC1-202ENST00000300853 ZSCAN10Q96SZ4 725 aaPredicted RBP12.99□□□□□ -0.33
ERCC1-202ENST00000300853 DNAJC7Q99615 494 aa12.99□□□□□ -0.33
ERCC1-202ENST00000300853 CFAP73A6NFT4 308 aa12.98□□□□□ -0.33
ERCC1-202ENST00000300853 SPDYE3A6NKU9 549 aa12.98□□□□□ -0.33
ERCC1-202ENST00000300853 CCT8L1PA6NM43 557 aa12.98□□□□□ -0.33
ERCC1-202ENST00000300853 CETN3O15182 167 aa12.98□□□□□ -0.33
ERCC1-202ENST00000300853 RAD51CO43502 376 aa12.98□□□□□ -0.33
ERCC1-202ENST00000300853 PRPHP41219 470 aa12.98□□□□□ -0.33
ERCC1-202ENST00000300853 TCIRG1Q13488 830 aa12.98□□□□□ -0.33
ERCC1-202ENST00000300853 NUGGCQ68CJ6 796 aa12.98□□□□□ -0.33
ERCC1-202ENST00000300853 NEK9Q8TD19 979 aa12.98□□□□□ -0.33
ERCC1-202ENST00000300853 STRBPQ96SI9 672 aaKnown RBP12.98□□□□□ -0.33
ERCC1-202ENST00000300853 PP2D1A8MPX8 630 aa12.98□□□□□ -0.33
ERCC1-202ENST00000300853 H0Y3Z8 333 aa12.98□□□□□ -0.33
ERCC1-202ENST00000300853 DAPK3O43293 454 aa12.98□□□□□ -0.33
ERCC1-202ENST00000300853 ABCB4P21439 1286 aa12.98□□□□□ -0.33
ERCC1-202ENST00000300853 CDC25CP30307 473 aa12.98□□□□□ -0.33
ERCC1-202ENST00000300853 TECP42680 631 aa12.98□□□□□ -0.33
ERCC1-202ENST00000300853 TRAPPC10P48553 1259 aa12.98□□□□□ -0.33
ERCC1-202ENST00000300853 CAVIN4Q5BKX8 364 aa12.98□□□□□ -0.33
ERCC1-202ENST00000300853 ANKRD20A8PQ5CZ79 823 aa12.98□□□□□ -0.33
ERCC1-202ENST00000300853 FAM47AQ5JRC9 791 aa12.98□□□□□ -0.33
ERCC1-202ENST00000300853 SLC30A9Q6PML9 568 aa12.98□□□□□ -0.33
ERCC1-202ENST00000300853 ADSSL1Q8N142 457 aa12.98□□□□□ -0.33
ERCC1-202ENST00000300853 FAM133AQ8N9E0 248 aa12.98□□□□□ -0.33
ERCC1-202ENST00000300853 U2AF1L4Q8WU68 220 aaKnown RBP12.98□□□□□ -0.33
ERCC1-202ENST00000300853 L3MBTL1Q9Y468 752 aa12.98□□□□□ -0.33
ERCC1-202ENST00000300853 FAM237AA0A1B0GTK4 181 aa12.98□□□□□ -0.33
ERCC1-202ENST00000300853 CCDC160A6NGH7 325 aa12.98□□□□□ -0.33
ERCC1-202ENST00000300853 KCNA6P17658 529 aa12.98□□□□□ -0.33
ERCC1-202ENST00000300853 ATP5DP30049 168 aa12.98□□□□□ -0.33
ERCC1-202ENST00000300853 ADCY1Q08828 1119 aa12.98□□□□□ -0.33
ERCC1-202ENST00000300853 LRRC41Q15345 812 aa12.98□□□□□ -0.33
ERCC1-202ENST00000300853 SYCE1Q8N0S2 351 aa12.98□□□□□ -0.33
ERCC1-202ENST00000300853 CASKIN2Q8WXE0 1202 aa12.98□□□□□ -0.33
ERCC1-202ENST00000300853 RAPGEF5Q92565 580 aa12.98□□□□□ -0.33
ERCC1-202ENST00000300853 CAVIN3Q969G5 261 aa12.98□□□□□ -0.33
ERCC1-202ENST00000300853 SH3GL2Q99962 352 aa12.98□□□□□ -0.33
ERCC1-202ENST00000300853 OSBPL1AQ9BXW6 950 aa12.98□□□□□ -0.33
ERCC1-202ENST00000300853 SEC31BQ9NQW1 1179 aa12.98□□□□□ -0.33
ERCC1-202ENST00000300853 DAAM1Q9Y4D1 1078 aa12.98□□□□□ -0.33
ERCC1-202ENST00000300853 UTYO14607 1347 aa12.97□□□□□ -0.33
ERCC1-202ENST00000300853 SOS2Q07890 1332 aaPredicted RBP12.97□□□□□ -0.33
ERCC1-202ENST00000300853 OPLAHO14841 1288 aa12.97□□□□□ -0.33
ERCC1-202ENST00000300853 H2AFZP0C0S5 128 aa12.97□□□□□ -0.33
ERCC1-202ENST00000300853 PUM3Q15397 648 aaKnown RBP12.97□□□□□ -0.33
ERCC1-202ENST00000300853 H2AFVQ71UI9 128 aa12.97□□□□□ -0.33
ERCC1-202ENST00000300853 CREG2Q8IUH2 290 aa12.97□□□□□ -0.33
ERCC1-202ENST00000300853 PNMA2Q9UL42 364 aa12.97□□□□□ -0.33
ERCC1-202ENST00000300853 ABCC12Q96J65 1359 aa12.97□□□□□ -0.33
ERCC1-202ENST00000300853 EIF3BP55884 814 aaKnown RBP12.97□□□□□ -0.33
ERCC1-202ENST00000300853 RASIP1Q5U651 963 aa12.97□□□□□ -0.33
ERCC1-202ENST00000300853 OTUD6AQ7L8S5 288 aa12.97□□□□□ -0.33
ERCC1-202ENST00000300853 YTHDF3Q7Z739 585 aaKnown RBP12.97□□□□□ -0.33
ERCC1-202ENST00000300853 DZIP3Q86Y13 1208 aaKnown RBP12.97□□□□□ -0.33
ERCC1-202ENST00000300853 CCDC105Q8IYK2 499 aa12.97□□□□□ -0.33
ERCC1-202ENST00000300853 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.97□□□□□ -0.33
ERCC1-202ENST00000300853 XPO6Q96QU8 1125 aaKnown RBP12.97□□□□□ -0.33
ERCC1-202ENST00000300853 ECT2Q9H8V3 914 aa12.97□□□□□ -0.33
ERCC1-202ENST00000300853 C6orf50Q9HD87 102 aa12.97□□□□□ -0.33
ERCC1-202ENST00000300853 A1CFQ9NQ94 594 aaKnown RBP12.97□□□□□ -0.33
ERCC1-202ENST00000300853 REXO2Q9Y3B8 237 aaKnown RBP12.97□□□□□ -0.33
ERCC1-202ENST00000300853 HECW2Q9P2P5 1572 aa12.97□□□□□ -0.33
ERCC1-202ENST00000300853 CEP170BQ9Y4F5 1589 aaPredicted RBP12.97□□□□□ -0.33
ERCC1-202ENST00000300853 H7C1W4 665 aa12.97□□□□□ -0.33
ERCC1-202ENST00000300853 EPB41P11171 864 aaKnown RBP12.97□□□□□ -0.33
ERCC1-202ENST00000300853 PLCG1P19174 1290 aa12.97□□□□□ -0.33
ERCC1-202ENST00000300853 HSD17B3P37058 310 aa12.97□□□□□ -0.33
ERCC1-202ENST00000300853 PDE6CP51160 858 aa12.97□□□□□ -0.33
ERCC1-202ENST00000300853 C6orf163Q5TEZ5 329 aa12.97□□□□□ -0.33
ERCC1-202ENST00000300853 KIF2BQ8N4N8 673 aa12.97□□□□□ -0.33
ERCC1-202ENST00000300853 PBKQ96KB5 322 aa12.97□□□□□ -0.33
ERCC1-202ENST00000300853 ZMYND12Q9H0C1 365 aa12.97□□□□□ -0.33
ERCC1-202ENST00000300853 MLXIPLQ9NP71 852 aa12.97□□□□□ -0.33
ERCC1-202ENST00000300853 AMACRQ9UHK6 382 aa12.97□□□□□ -0.33
ERCC1-202ENST00000300853 PLEKHG1Q9ULL1 1385 aa12.97□□□□□ -0.33
ERCC1-202ENST00000300853 XDHP47989 1333 aa12.96□□□□□ -0.33
ERCC1-202ENST00000300853 CHRM1P11229 460 aaPredicted RBP12.96□□□□□ -0.33
ERCC1-202ENST00000300853 CRNKL1Q9BZJ0 848 aaKnown RBP12.96□□□□□ -0.33
ERCC1-202ENST00000300853 MTUS1Q9ULD2 1270 aa12.96□□□□□ -0.33
ERCC1-202ENST00000300853 ZNF233A6NK53 670 aa12.96□□□□□ -0.33
ERCC1-202ENST00000300853 PRPF3O43395 683 aaKnown RBP12.96□□□□□ -0.33
ERCC1-202ENST00000300853 ATP6V1G2O95670 118 aa12.96□□□□□ -0.33
ERCC1-202ENST00000300853 SERPING1P05155 500 aa12.96□□□□□ -0.33
ERCC1-202ENST00000300853 RWDD2BP57060 319 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms