RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 CTNND1O60716 968 aaKnown RBP12.09□□□□□ -0.47
SNX20-201ENST00000300590 PDE8BO95263 885 aa12.09□□□□□ -0.47
SNX20-201ENST00000300590 MYBL1P10243 752 aa12.09□□□□□ -0.47
SNX20-201ENST00000300590 ELF3P78545 371 aaPredicted RBP12.09□□□□□ -0.47
SNX20-201ENST00000300590 ALX1Q15699 326 aa12.09□□□□□ -0.47
SNX20-201ENST00000300590 FAM47AQ5JRC9 791 aa12.09□□□□□ -0.47
SNX20-201ENST00000300590 DYMQ7RTS9 669 aa12.09□□□□□ -0.47
SNX20-201ENST00000300590 GIMAP8Q8ND71 665 aaPredicted RBP12.09□□□□□ -0.47
SNX20-201ENST00000300590 TAF4BQ92750 862 aa12.09□□□□□ -0.47
SNX20-201ENST00000300590 RNF41Q9H4P4 317 aaPredicted RBP12.09□□□□□ -0.47
SNX20-201ENST00000300590 TMCO5BA8MYB1 307 aa12.09□□□□□ -0.47
SNX20-201ENST00000300590 ATP6V1G2O95670 118 aa12.09□□□□□ -0.47
SNX20-201ENST00000300590 CYP7A1P22680 504 aa12.09□□□□□ -0.47
SNX20-201ENST00000300590 PPP2R2AP63151 447 aa12.09□□□□□ -0.47
SNX20-201ENST00000300590 EVX2Q03828 476 aa12.09□□□□□ -0.47
SNX20-201ENST00000300590 ZNF844Q08AG5 666 aa12.09□□□□□ -0.47
SNX20-201ENST00000300590 INF2Q27J81 1249 aa12.09□□□□□ -0.47
SNX20-201ENST00000300590 MAEAQ7L5Y9 396 aa12.09□□□□□ -0.47
SNX20-201ENST00000300590 CCDC63Q8NA47 563 aa12.09□□□□□ -0.47
SNX20-201ENST00000300590 WHAMMQ8TF30 809 aa12.09□□□□□ -0.47
SNX20-201ENST00000300590 ZSCAN10Q96SZ4 725 aaPredicted RBP12.09□□□□□ -0.47
SNX20-201ENST00000300590 PACSIN1Q9BY11 444 aa12.09□□□□□ -0.47
SNX20-201ENST00000300590 GOPCQ9HD26 462 aa12.09□□□□□ -0.47
SNX20-201ENST00000300590 BCAMP50895 628 aa12.08□□□□□ -0.48
SNX20-201ENST00000300590 UAP1Q16222 522 aaPredicted RBP12.08□□□□□ -0.48
SNX20-201ENST00000300590 KIAA0753Q2KHM9 967 aa12.08□□□□□ -0.48
SNX20-201ENST00000300590 LRRC15Q8TF66 581 aa12.08□□□□□ -0.48
SNX20-201ENST00000300590 TBC1D5Q92609 795 aa12.08□□□□□ -0.48
SNX20-201ENST00000300590 CCDC47Q96A33 483 aaKnown RBP12.08□□□□□ -0.48
SNX20-201ENST00000300590 NLRP3Q96P20 1036 aa12.08□□□□□ -0.48
SNX20-201ENST00000300590 CCDC113Q9H0I3 377 aa12.08□□□□□ -0.48
SNX20-201ENST00000300590 NEUROG2Q9H2A3 272 aa12.08□□□□□ -0.48
SNX20-201ENST00000300590 TAF1DQ9H5J8 278 aaPredicted RBP12.08□□□□□ -0.48
SNX20-201ENST00000300590 ADAMTS1Q9UHI8 967 aa12.08□□□□□ -0.48
SNX20-201ENST00000300590 LMO7Q8WWI1 1683 aa12.08□□□□□ -0.48
SNX20-201ENST00000300590 CCDC194A0A1B0GVG4 234 aa12.08□□□□□ -0.48
SNX20-201ENST00000300590 ANP32DO95626 131 aa12.08□□□□□ -0.48
SNX20-201ENST00000300590 IFNAR2P48551 515 aa12.08□□□□□ -0.48
SNX20-201ENST00000300590 TNNC1P63316 161 aa12.08□□□□□ -0.48
SNX20-201ENST00000300590 DRP2Q13474 957 aa12.08□□□□□ -0.48
SNX20-201ENST00000300590 LRRC41Q15345 812 aa12.08□□□□□ -0.48
SNX20-201ENST00000300590 AP1ARQ63HQ0 302 aa12.08□□□□□ -0.48
SNX20-201ENST00000300590 ADAT2Q7Z6V5 191 aaKnown RBP12.08□□□□□ -0.48
SNX20-201ENST00000300590 FAM114A1Q8IWE2 563 aa12.08□□□□□ -0.48
SNX20-201ENST00000300590 DDX17Q92841 729 aaKnown RBP12.08□□□□□ -0.48
SNX20-201ENST00000300590 FAM167BQ9BTA0 163 aa12.08□□□□□ -0.48
SNX20-201ENST00000300590 PAGR1Q9BTK6 254 aa12.08□□□□□ -0.48
SNX20-201ENST00000300590 MYO5AQ9Y4I1 1855 aaKnown RBP12.08□□□□□ -0.48
SNX20-201ENST00000300590 C5P01031 1676 aa12.08□□□□□ -0.48
SNX20-201ENST00000300590 DAPK3O43293 454 aa12.08□□□□□ -0.48
SNX20-201ENST00000300590 PLCG1P19174 1290 aa12.08□□□□□ -0.48
SNX20-201ENST00000300590 FUT2Q10981 343 aa12.08□□□□□ -0.48
SNX20-201ENST00000300590 SEMA3FQ13275 785 aa12.08□□□□□ -0.48
SNX20-201ENST00000300590 BYSLQ13895 437 aaKnown RBP12.08□□□□□ -0.48
SNX20-201ENST00000300590 KCNB1Q14721 858 aa12.08□□□□□ -0.48
SNX20-201ENST00000300590 SEC23AQ15436 765 aa12.08□□□□□ -0.48
SNX20-201ENST00000300590 VWA3BQ502W6 1294 aa12.08□□□□□ -0.48
SNX20-201ENST00000300590 CUL5Q93034 780 aa12.08□□□□□ -0.48
SNX20-201ENST00000300590 TNFRSF25Q93038 417 aa12.08□□□□□ -0.48
SNX20-201ENST00000300590 PYM1Q9BRP8 204 aaKnown RBP12.08□□□□□ -0.48
SNX20-201ENST00000300590 ATP6V0A4Q9HBG4 840 aa12.08□□□□□ -0.48
SNX20-201ENST00000300590 SLC12A6Q9UHW9 1150 aa12.08□□□□□ -0.48
SNX20-201ENST00000300590 FAM205AQ6ZU69 1335 aa12.07□□□□□ -0.48
SNX20-201ENST00000300590 BICDL2A1A5D9 508 aa12.07□□□□□ -0.48
SNX20-201ENST00000300590 RHOBTB3O94955 611 aa12.07□□□□□ -0.48
SNX20-201ENST00000300590 LONP1P36776 959 aaKnown RBP12.07□□□□□ -0.48
SNX20-201ENST00000300590 ZNF572Q7Z3I7 529 aaPredicted RBP12.07□□□□□ -0.48
SNX20-201ENST00000300590 DHTKD1Q96HY7 919 aaPredicted RBP12.07□□□□□ -0.48
SNX20-201ENST00000300590 ELAC2Q9BQ52 826 aaKnown RBP12.07□□□□□ -0.48
SNX20-201ENST00000300590 CPSF2Q9P2I0 782 aaKnown RBP12.07□□□□□ -0.48
SNX20-201ENST00000300590 PNMA2Q9UL42 364 aa12.07□□□□□ -0.48
SNX20-201ENST00000300590 STK38LQ9Y2H1 464 aa12.07□□□□□ -0.48
SNX20-201ENST00000300590 CD2APQ9Y5K6 639 aa12.07□□□□□ -0.48
SNX20-201ENST00000300590 DIAPH2O60879 1101 aa12.07□□□□□ -0.48
SNX20-201ENST00000300590 TRIM37O94972 964 aa12.07□□□□□ -0.48
SNX20-201ENST00000300590 VIMP08670 466 aaKnown RBP12.07□□□□□ -0.48
SNX20-201ENST00000300590 SCG2P13521 617 aa12.07□□□□□ -0.48
SNX20-201ENST00000300590 SSR1P43307 286 aaKnown RBP12.07□□□□□ -0.48
SNX20-201ENST00000300590 DHX9Q08211 1270 aaKnown RBP12.07□□□□□ -0.48
SNX20-201ENST00000300590 RAPGEF1Q13905 1077 aa12.07□□□□□ -0.48
SNX20-201ENST00000300590 RUFY4Q6ZNE9 571 aa12.07□□□□□ -0.48
SNX20-201ENST00000300590 ZBTB10Q96DT7 871 aa12.07□□□□□ -0.48
SNX20-201ENST00000300590 ERGIC2Q96RQ1 377 aa12.07□□□□□ -0.48
SNX20-201ENST00000300590 YIPF3Q9GZM5 350 aa12.07□□□□□ -0.48
SNX20-201ENST00000300590 AMACRQ9UHK6 382 aa12.07□□□□□ -0.48
SNX20-201ENST00000300590 TRMT112Q9UI30 125 aaKnown RBP12.07□□□□□ -0.48
SNX20-201ENST00000300590 ATP8A1Q9Y2Q0 1164 aa12.07□□□□□ -0.48
SNX20-201ENST00000300590 RTN2O75298 545 aa12.06□□□□□ -0.48
SNX20-201ENST00000300590 UQCRFS1P1P0C7P4 283 aa12.06□□□□□ -0.48
SNX20-201ENST00000300590 TLDC1Q6P9B6 456 aa12.06□□□□□ -0.48
SNX20-201ENST00000300590 CD302Q8IX05 232 aa12.06□□□□□ -0.48
SNX20-201ENST00000300590 LMBR1Q8WVP7 490 aa12.06□□□□□ -0.48
SNX20-201ENST00000300590 RUBCNQ92622 972 aa12.06□□□□□ -0.48
SNX20-201ENST00000300590 CELF4Q9BZC1 486 aaKnown RBP12.06□□□□□ -0.48
SNX20-201ENST00000300590 SEMA6BQ9H3T3 888 aa12.06□□□□□ -0.48
SNX20-201ENST00000300590 RTL9Q8NET4 1388 aa12.06□□□□□ -0.48
SNX20-201ENST00000300590 ABCC12Q96J65 1359 aa12.06□□□□□ -0.48
SNX20-201ENST00000300590 TNFRSF8P28908 595 aa12.06□□□□□ -0.48
SNX20-201ENST00000300590 HSPA9P38646 679 aaKnown RBP12.06□□□□□ -0.48
SNX20-201ENST00000300590 POLR2FP61218 127 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms