RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 TMBIM4Q9HC24 238 aa11.31□□□□□ -0.6
LMX1A-201ENST00000294816 LAMB4A4D0S4 1761 aa11.31□□□□□ -0.6
LMX1A-201ENST00000294816 A0A0G2JS52 829 aa11.31□□□□□ -0.6
LMX1A-201ENST00000294816 A0A1B0GUA9 196 aa11.31□□□□□ -0.6
LMX1A-201ENST00000294816 A0A1W2PQJ5 194 aa11.31□□□□□ -0.6
LMX1A-201ENST00000294816 FAM170AA1A519 330 aa11.31□□□□□ -0.6
LMX1A-201ENST00000294816 CEP104O60308 925 aa11.31□□□□□ -0.6
LMX1A-201ENST00000294816 CALML3P27482 149 aa11.31□□□□□ -0.6
LMX1A-201ENST00000294816 HSD17B3P37058 310 aa11.31□□□□□ -0.6
LMX1A-201ENST00000294816 CDK17Q00537 523 aa11.31□□□□□ -0.6
LMX1A-201ENST00000294816 IFFO1Q0D2I5 559 aa11.31□□□□□ -0.6
LMX1A-201ENST00000294816 KRT71Q3SY84 523 aa11.31□□□□□ -0.6
LMX1A-201ENST00000294816 HIBCHQ6NVY1 386 aaPredicted RBP11.31□□□□□ -0.6
LMX1A-201ENST00000294816 PNMA8AQ86V59 439 aaPredicted RBP11.31□□□□□ -0.6
LMX1A-201ENST00000294816 AKAP11Q9UKA4 1901 aa11.31□□□□□ -0.6
LMX1A-201ENST00000294816 TMCO5BA8MYB1 307 aa11.31□□□□□ -0.6
LMX1A-201ENST00000294816 USP17L12C9JPN9 530 aa11.31□□□□□ -0.6
LMX1A-201ENST00000294816 USP17L21D6R901 530 aa11.31□□□□□ -0.6
LMX1A-201ENST00000294816 GCFC2P16383 781 aaKnown RBP11.31□□□□□ -0.6
LMX1A-201ENST00000294816 TNFRSF8P28908 595 aa11.31□□□□□ -0.6
LMX1A-201ENST00000294816 RAPGEF1Q13905 1077 aa11.31□□□□□ -0.6
LMX1A-201ENST00000294816 ANKRD20A8PQ5CZ79 823 aa11.31□□□□□ -0.6
LMX1A-201ENST00000294816 LRCH2Q5VUJ6 765 aa11.31□□□□□ -0.6
LMX1A-201ENST00000294816 PPP4R3AQ6IN85 833 aa11.31□□□□□ -0.6
LMX1A-201ENST00000294816 GIGYF2Q6Y7W6 1299 aaKnown RBP11.31□□□□□ -0.6
LMX1A-201ENST00000294816 LRRC15Q8TF66 581 aa11.31□□□□□ -0.6
LMX1A-201ENST00000294816 ZNF622Q969S3 477 aaKnown RBP eCLIP11.31□□□□□ -0.6
LMX1A-201ENST00000294816 HVCN1Q96D96 273 aa11.31□□□□□ -0.6
LMX1A-201ENST00000294816 TRIM31Q9BZY9 425 aa11.31□□□□□ -0.6
LMX1A-201ENST00000294816 TSKSQ9UJT2 592 aa11.31□□□□□ -0.6
LMX1A-201ENST00000294816 LEMD3Q9Y2U8 911 aa11.31□□□□□ -0.6
LMX1A-201ENST00000294816 PNPLA7Q6ZV29 1317 aa11.31□□□□□ -0.6
LMX1A-201ENST00000294816 KDM4FA0A1W2PPD8 638 aa11.3□□□□□ -0.6
LMX1A-201ENST00000294816 TSPY2A6NKD2 308 aa11.3□□□□□ -0.6
LMX1A-201ENST00000294816 SMIM23A6NLE4 172 aa11.3□□□□□ -0.6
LMX1A-201ENST00000294816 PDE8AO60658 829 aa11.3□□□□□ -0.6
LMX1A-201ENST00000294816 SCTRP47872 440 aa11.3□□□□□ -0.6
LMX1A-201ENST00000294816 TJP1Q07157 1748 aa11.3□□□□□ -0.6
LMX1A-201ENST00000294816 PLCB4Q15147 1175 aa11.3□□□□□ -0.6
LMX1A-201ENST00000294816 LRRC41Q15345 812 aa11.3□□□□□ -0.6
LMX1A-201ENST00000294816 KIAA0753Q2KHM9 967 aa11.3□□□□□ -0.6
LMX1A-201ENST00000294816 LETM2Q2VYF4 491 aa11.3□□□□□ -0.6
LMX1A-201ENST00000294816 TCP11Q8WWU5 503 aa11.3□□□□□ -0.6
LMX1A-201ENST00000294816 TRIM9Q9C026 710 aa11.3□□□□□ -0.6
LMX1A-201ENST00000294816 SEMA6BQ9H3T3 888 aa11.3□□□□□ -0.6
LMX1A-201ENST00000294816 LUC7LQ9NQ29 371 aaKnown RBP11.3□□□□□ -0.6
LMX1A-201ENST00000294816 BUB1BO60566 1050 aaPredicted RBP11.3□□□□□ -0.6
LMX1A-201ENST00000294816 KLRC1P26715 233 aa11.3□□□□□ -0.6
LMX1A-201ENST00000294816 MAGOHP61326 146 aaKnown RBP11.3□□□□□ -0.6
LMX1A-201ENST00000294816 TRIM28Q13263 835 aaKnown RBP11.3□□□□□ -0.6
LMX1A-201ENST00000294816 PFKFB3Q16875 520 aaPredicted RBP11.3□□□□□ -0.6
LMX1A-201ENST00000294816 SLC9C1Q4G0N8 1177 aa11.3□□□□□ -0.6
LMX1A-201ENST00000294816 GKAP1Q5VSY0 366 aaPredicted RBP11.3□□□□□ -0.6
LMX1A-201ENST00000294816 C4orf32Q8N8J7 132 aa11.3□□□□□ -0.6
LMX1A-201ENST00000294816 TBC1D5Q92609 795 aa11.3□□□□□ -0.6
LMX1A-201ENST00000294816 MAGOHBQ96A72 148 aaKnown RBP11.3□□□□□ -0.6
LMX1A-201ENST00000294816 MTA3Q9BTC8 594 aa11.3□□□□□ -0.6
LMX1A-201ENST00000294816 TAF1DQ9H5J8 278 aaPredicted RBP11.3□□□□□ -0.6
LMX1A-201ENST00000294816 KANSL2Q9H9L4 492 aa11.3□□□□□ -0.6
LMX1A-201ENST00000294816 KBTBD4Q9NVX7 518 aa11.3□□□□□ -0.6
LMX1A-201ENST00000294816 C21orf2O43822 256 aa11.3□□□□□ -0.6
LMX1A-201ENST00000294816 DDAH1O94760 285 aa11.3□□□□□ -0.6
LMX1A-201ENST00000294816 CLTAP09496 248 aa11.3□□□□□ -0.6
LMX1A-201ENST00000294816 TECP42680 631 aa11.3□□□□□ -0.6
LMX1A-201ENST00000294816 POLR2FP61218 127 aaKnown RBP11.3□□□□□ -0.6
LMX1A-201ENST00000294816 ERVK-9P63128 1117 aa11.3□□□□□ -0.6
LMX1A-201ENST00000294816 CDC37Q16543 378 aaPredicted RBP11.3□□□□□ -0.6
LMX1A-201ENST00000294816 MAN2A1Q16706 1144 aa11.3□□□□□ -0.6
LMX1A-201ENST00000294816 TXNRD1Q16881 649 aa11.3□□□□□ -0.6
LMX1A-201ENST00000294816 CCDC84Q86UT8 332 aaPredicted RBP11.3□□□□□ -0.6
LMX1A-201ENST00000294816 PROSER2Q86WR7 435 aaPredicted RBP11.3□□□□□ -0.6
LMX1A-201ENST00000294816 DNAAF5Q86Y56 855 aa11.3□□□□□ -0.6
LMX1A-201ENST00000294816 CCDC50Q8IVM0 306 aa11.3□□□□□ -0.6
LMX1A-201ENST00000294816 MDM1Q8TC05 714 aa11.3□□□□□ -0.6
LMX1A-201ENST00000294816 RAPGEF5Q92565 580 aa11.3□□□□□ -0.6
LMX1A-201ENST00000294816 SELENOSQ9BQE4 189 aa11.3□□□□□ -0.6
LMX1A-201ENST00000294816 DPH5Q9H2P9 285 aa11.3□□□□□ -0.6
LMX1A-201ENST00000294816 TMOD3Q9NYL9 352 aa11.3□□□□□ -0.6
LMX1A-201ENST00000294816 FBXL5Q9UKA1 691 aa11.3□□□□□ -0.6
LMX1A-201ENST00000294816 SIK3Q9Y2K2 1263 aa11.3□□□□□ -0.6
LMX1A-201ENST00000294816 KIF1AQ12756 1690 aa11.3□□□□□ -0.6
LMX1A-201ENST00000294816 PKD1L3Q7Z443 1732 aa11.29□□□□□ -0.6
LMX1A-201ENST00000294816 PDE6BP35913 854 aa11.29□□□□□ -0.6
LMX1A-201ENST00000294816 DRP2Q13474 957 aa11.29□□□□□ -0.6
LMX1A-201ENST00000294816 FIGNQ5HY92 759 aa11.29□□□□□ -0.6
LMX1A-201ENST00000294816 SFMBT2Q5VUG0 894 aa11.29□□□□□ -0.6
LMX1A-201ENST00000294816 CNNM4Q6P4Q7 775 aa11.29□□□□□ -0.6
LMX1A-201ENST00000294816 PDXDC1Q6P996 788 aa11.29□□□□□ -0.6
LMX1A-201ENST00000294816 C6orf89Q6UWU4 347 aa11.29□□□□□ -0.6
LMX1A-201ENST00000294816 RUFY4Q6ZNE9 571 aa11.29□□□□□ -0.6
LMX1A-201ENST00000294816 FAM228AQ86W67 206 aa11.29□□□□□ -0.6
LMX1A-201ENST00000294816 TEX11Q8IYF3 940 aa11.29□□□□□ -0.6
LMX1A-201ENST00000294816 LRRC45Q96CN5 670 aa11.29□□□□□ -0.6
LMX1A-201ENST00000294816 MROH5Q6ZUA9 1318 aa11.29□□□□□ -0.6
LMX1A-201ENST00000294816 TLDC2A0PJX2 215 aa11.29□□□□□ -0.6
LMX1A-201ENST00000294816 PPP2R2AP63151 447 aa11.29□□□□□ -0.6
LMX1A-201ENST00000294816 RPS6KA1Q15418 735 aa11.29□□□□□ -0.6
LMX1A-201ENST00000294816 CD302Q8IX05 232 aa11.29□□□□□ -0.6
LMX1A-201ENST00000294816 CNKSR2Q8WXI2 1034 aa11.29□□□□□ -0.6
LMX1A-201ENST00000294816 TACO1Q9BSH4 297 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms