RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 KLHDC7BQ96G42 594 aa11.96□□□□□ -0.49
LRTM1-201ENST00000273286 ANO2Q9NQ90 1003 aa11.96□□□□□ -0.49
LRTM1-201ENST00000273286 ZNF112Q9UJU3 913 aa11.96□□□□□ -0.49
LRTM1-201ENST00000273286 DAGLAQ9Y4D2 1042 aa11.96□□□□□ -0.49
LRTM1-201ENST00000273286 PDS5AQ29RF7 1337 aaKnown RBP11.96□□□□□ -0.5
LRTM1-201ENST00000273286 BTBD19C9JJ37 291 aa11.95□□□□□ -0.5
LRTM1-201ENST00000273286 EREGO14944 169 aa11.95□□□□□ -0.5
LRTM1-201ENST00000273286 DDX3YO15523 660 aaKnown RBP11.95□□□□□ -0.5
LRTM1-201ENST00000273286 FSTP19883 344 aa11.95□□□□□ -0.5
LRTM1-201ENST00000273286 HOXD10P28358 340 aa11.95□□□□□ -0.5
LRTM1-201ENST00000273286 NOL9Q5SY16 702 aaKnown RBP11.95□□□□□ -0.5
LRTM1-201ENST00000273286 SNX29Q8TEQ0 813 aa11.95□□□□□ -0.5
LRTM1-201ENST00000273286 UBASH3BQ8TF42 649 aa11.95□□□□□ -0.5
LRTM1-201ENST00000273286 UBL7Q96S82 380 aaPredicted RBP11.95□□□□□ -0.5
LRTM1-201ENST00000273286 CEP41Q9BYV8 373 aa11.95□□□□□ -0.5
LRTM1-201ENST00000273286 FZD6O60353 706 aa11.94□□□□□ -0.5
LRTM1-201ENST00000273286 ADAM11O75078 769 aa11.94□□□□□ -0.5
LRTM1-201ENST00000273286 ENTPD3O75355 529 aa11.94□□□□□ -0.5
LRTM1-201ENST00000273286 TNFRSF21O75509 655 aa11.94□□□□□ -0.5
LRTM1-201ENST00000273286 PRDX5P30044 214 aa11.94□□□□□ -0.5
LRTM1-201ENST00000273286 USP5P45974 858 aa11.94□□□□□ -0.5
LRTM1-201ENST00000273286 CDC42EP5Q6NZY7 148 aa11.94□□□□□ -0.5
LRTM1-201ENST00000273286 KIAA1211Q6ZU35 1233 aa11.94□□□□□ -0.5
LRTM1-201ENST00000273286 TRMT2AQ8IZ69 625 aaKnown RBP11.94□□□□□ -0.5
LRTM1-201ENST00000273286 COPRSQ9NQ92 184 aa11.94□□□□□ -0.5
LRTM1-201ENST00000273286 FOXD3Q9UJU5 478 aaPredicted RBP11.94□□□□□ -0.5
LRTM1-201ENST00000273286 PTCH2Q9Y6C5 1203 aa11.94□□□□□ -0.5
LRTM1-201ENST00000273286 MKI67P46013 3256 aaKnown RBP11.94□□□□□ -0.5
LRTM1-201ENST00000273286 BRCA2P51587 3418 aa11.94□□□□□ -0.5
LRTM1-201ENST00000273286 CXCL11O14625 94 aa11.94□□□□□ -0.5
LRTM1-201ENST00000273286 EHHADHQ08426 723 aa11.94□□□□□ -0.5
LRTM1-201ENST00000273286 SLC4A8Q2Y0W8 1093 aa11.94□□□□□ -0.5
LRTM1-201ENST00000273286 SPTY2D1Q68D10 685 aaPredicted RBP11.94□□□□□ -0.5
LRTM1-201ENST00000273286 C17orf99Q6UX52 265 aa11.94□□□□□ -0.5
LRTM1-201ENST00000273286 MIGA2Q7L4E1 593 aa11.94□□□□□ -0.5
LRTM1-201ENST00000273286 ARHGAP45Q92619 1136 aa11.94□□□□□ -0.5
LRTM1-201ENST00000273286 WNT8BQ93098 351 aa11.94□□□□□ -0.5
LRTM1-201ENST00000273286 PARK7Q99497 189 aaKnown RBP11.94□□□□□ -0.5
LRTM1-201ENST00000273286 OSMRQ99650 979 aa11.94□□□□□ -0.5
LRTM1-201ENST00000273286 IDI2Q9BXS1 227 aa11.94□□□□□ -0.5
LRTM1-201ENST00000273286 SIL1Q9H173 461 aa11.94□□□□□ -0.5
LRTM1-201ENST00000273286 AKAP2Q9Y2D5 859 aa11.94□□□□□ -0.5
LRTM1-201ENST00000273286 AK9Q5TCS8 1911 aa11.93□□□□□ -0.5
LRTM1-201ENST00000273286 PDHXO00330 501 aa11.93□□□□□ -0.5
LRTM1-201ENST00000273286 GNAI3P08754 354 aa11.93□□□□□ -0.5
LRTM1-201ENST00000273286 EN2P19622 333 aaPredicted RBP11.93□□□□□ -0.5
LRTM1-201ENST00000273286 FASTKD5Q7L8L6 764 aaKnown RBP11.93□□□□□ -0.5
LRTM1-201ENST00000273286 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.93□□□□□ -0.5
LRTM1-201ENST00000273286 SLC7A3Q8WY07 619 aa11.93□□□□□ -0.5
LRTM1-201ENST00000273286 ZKSCAN3Q9BRR0 538 aa11.93□□□□□ -0.5
LRTM1-201ENST00000273286 USP40Q9NVE5 1235 aa11.93□□□□□ -0.5
LRTM1-201ENST00000273286 RNF112Q9ULX5 631 aa11.93□□□□□ -0.5
LRTM1-201ENST00000273286 RAXQ9Y2V3 346 aa11.93□□□□□ -0.5
LRTM1-201ENST00000273286 MAP4K4O95819 1239 aaPredicted RBP11.92□□□□□ -0.5
LRTM1-201ENST00000273286 CAPN2P17655 700 aa11.92□□□□□ -0.5
LRTM1-201ENST00000273286 TCP10Q12799 353 aa11.92□□□□□ -0.5
LRTM1-201ENST00000273286 NFIAQ12857 509 aa11.92□□□□□ -0.5
LRTM1-201ENST00000273286 MVPQ14764 893 aaKnown RBP11.92□□□□□ -0.5
LRTM1-201ENST00000273286 DZIP1Q86YF9 867 aaKnown RBP11.92□□□□□ -0.5
LRTM1-201ENST00000273286 TMEM102Q8N9M5 508 aaPredicted RBP11.92□□□□□ -0.5
LRTM1-201ENST00000273286 PICK1Q9NRD5 415 aa11.92□□□□□ -0.5
LRTM1-201ENST00000273286 SRRDQ9UH36 339 aa11.92□□□□□ -0.5
LRTM1-201ENST00000273286 NOB1Q9ULX3 412 aaKnown RBP11.92□□□□□ -0.5
LRTM1-201ENST00000273286 SOX13Q9UN79 622 aa11.92□□□□□ -0.5
LRTM1-201ENST00000273286 SLC45A1Q9Y2W3 748 aa11.92□□□□□ -0.5
LRTM1-201ENST00000273286 LRRFIP2Q9Y608 721 aaKnown RBP11.92□□□□□ -0.5
LRTM1-201ENST00000273286 GAKO14976 1311 aa11.92□□□□□ -0.5
LRTM1-201ENST00000273286 HYAL3O43820 417 aaPredicted RBP11.91□□□□□ -0.5
LRTM1-201ENST00000273286 EDN3P14138 238 aa11.91□□□□□ -0.5
LRTM1-201ENST00000273286 PHKA1P46020 1223 aa11.91□□□□□ -0.5
LRTM1-201ENST00000273286 NLRP12P59046 1061 aa11.91□□□□□ -0.5
LRTM1-201ENST00000273286 CAP1Q01518 475 aa11.91□□□□□ -0.5
LRTM1-201ENST00000273286 MTX1Q13505 466 aa11.91□□□□□ -0.5
LRTM1-201ENST00000273286 HABP4Q5JVS0 413 aaKnown RBP11.91□□□□□ -0.5
LRTM1-201ENST00000273286 SCYL3Q8IZE3 742 aa11.91□□□□□ -0.5
LRTM1-201ENST00000273286 UTP4Q969X6 686 aaKnown RBP11.91□□□□□ -0.5
LRTM1-201ENST00000273286 OSGEPQ9NPF4 335 aa11.91□□□□□ -0.5
LRTM1-201ENST00000273286 USTQ9Y2C2 406 aa11.91□□□□□ -0.5
LRTM1-201ENST00000273286 IPO8O15397 1037 aaKnown RBP11.9□□□□□ -0.5
LRTM1-201ENST00000273286 PSMC4P43686 418 aa11.9□□□□□ -0.5
LRTM1-201ENST00000273286 RASGRF1Q13972 1273 aa11.9□□□□□ -0.5
LRTM1-201ENST00000273286 ZSCAN29Q8IWY8 852 aaPredicted RBP11.9□□□□□ -0.5
LRTM1-201ENST00000273286 ARMC10Q8N2F6 343 aa11.9□□□□□ -0.5
LRTM1-201ENST00000273286 RAET1EQ8TD07 263 aa11.9□□□□□ -0.5
LRTM1-201ENST00000273286 CPA4Q9UI42 421 aa11.9□□□□□ -0.5
LRTM1-201ENST00000273286 ATRNL1Q5VV63 1379 aa11.9□□□□□ -0.5
LRTM1-201ENST00000273286 DOCK2Q92608 1830 aa11.9□□□□□ -0.51
LRTM1-201ENST00000273286 MYH2Q9UKX2 1941 aa11.89□□□□□ -0.51
LRTM1-201ENST00000273286 A0A1B0GUL7 405 aa11.89□□□□□ -0.51
LRTM1-201ENST00000273286 DHX15O43143 795 aaKnown RBP11.89□□□□□ -0.51
LRTM1-201ENST00000273286 SRGAP3O43295 1099 aa11.89□□□□□ -0.51
LRTM1-201ENST00000273286 CTNND1O60716 968 aaKnown RBP11.89□□□□□ -0.51
LRTM1-201ENST00000273286 IGSF3O75054 1194 aa11.89□□□□□ -0.51
LRTM1-201ENST00000273286 LDHCP07864 332 aa11.89□□□□□ -0.51
LRTM1-201ENST00000273286 GRK4P32298 578 aa11.89□□□□□ -0.51
LRTM1-201ENST00000273286 RGS3P49796 1198 aa11.89□□□□□ -0.51
LRTM1-201ENST00000273286 FCGRTP55899 365 aa11.89□□□□□ -0.51
LRTM1-201ENST00000273286 UVSSAQ2YD98 709 aa11.89□□□□□ -0.51
LRTM1-201ENST00000273286 GJD3Q8N144 294 aa11.89□□□□□ -0.51
LRTM1-201ENST00000273286 SH3TC2Q8TF17 1288 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms