RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 KDM3AQ9Y4C1 1321 aa18.62■□□□□ 0.57
CCDC40-201ENST00000269318 PVALEFA0A1B0GWK0 134 aa18.62■□□□□ 0.57
CCDC40-201ENST00000269318 PSMA7O14818 248 aa18.62■□□□□ 0.57
CCDC40-201ENST00000269318 KCNJ6P48051 423 aa18.62■□□□□ 0.57
CCDC40-201ENST00000269318 SPAG1Q07617 926 aa18.62■□□□□ 0.57
CCDC40-201ENST00000269318 STIM1Q13586 685 aa18.62■□□□□ 0.57
CCDC40-201ENST00000269318 KRT31Q15323 416 aa18.62■□□□□ 0.57
CCDC40-201ENST00000269318 NBPF12Q5TAG4 269 aaPredicted RBP18.62■□□□□ 0.57
CCDC40-201ENST00000269318 TTI2Q6NXR4 508 aa18.62■□□□□ 0.57
CCDC40-201ENST00000269318 UNC13DQ70J99 1090 aa18.62■□□□□ 0.57
CCDC40-201ENST00000269318 IRF2BP1Q8IU81 584 aa18.62■□□□□ 0.57
CCDC40-201ENST00000269318 LPAR1Q92633 364 aa18.62■□□□□ 0.57
CCDC40-201ENST00000269318 UIMC1Q96RL1 719 aa18.62■□□□□ 0.57
CCDC40-201ENST00000269318 MRPL11Q9Y3B7 192 aaKnown RBP18.62■□□□□ 0.57
CCDC40-201ENST00000269318 GCOM1H8Y6P7 765 aaPredicted RBP18.61■□□□□ 0.57
CCDC40-201ENST00000269318 WDR46O15213 610 aaKnown RBP18.61■□□□□ 0.57
CCDC40-201ENST00000269318 POLR2MP0CAP2 368 aa18.61■□□□□ 0.57
CCDC40-201ENST00000269318 FCER1AP12319 257 aa18.61■□□□□ 0.57
CCDC40-201ENST00000269318 CCT6AP40227 531 aaKnown RBP18.61■□□□□ 0.57
CCDC40-201ENST00000269318 TCP11X2Q5H9J9 407 aa18.61■□□□□ 0.57
CCDC40-201ENST00000269318 LDHDQ86WU2 507 aa18.61■□□□□ 0.57
CCDC40-201ENST00000269318 KIAA0895Q8NCT3 520 aa18.61■□□□□ 0.57
CCDC40-201ENST00000269318 FAM20AQ96MK3 541 aa18.61■□□□□ 0.57
CCDC40-201ENST00000269318 NT5C3AQ9H0P0 336 aa18.61■□□□□ 0.57
CCDC40-201ENST00000269318 IGLV3-22A0A075B6J6 115 aa18.61■□□□□ 0.57
CCDC40-201ENST00000269318 USP27XA6NNY8 438 aa18.61■□□□□ 0.57
CCDC40-201ENST00000269318 CFBP00751 764 aa18.61■□□□□ 0.57
CCDC40-201ENST00000269318 STAT3P40763 770 aa18.61■□□□□ 0.57
CCDC40-201ENST00000269318 FCHSD1Q86WN1 690 aa18.61■□□□□ 0.57
CCDC40-201ENST00000269318 LRRC27Q9C0I9 530 aa18.61■□□□□ 0.57
CCDC40-201ENST00000269318 ZNF536O15090 1300 aa18.61■□□□□ 0.57
CCDC40-201ENST00000269318 ABCB11O95342 1321 aa18.61■□□□□ 0.57
CCDC40-201ENST00000269318 KCNJ18B7U540 433 aa18.6■□□□□ 0.57
CCDC40-201ENST00000269318 MSH4O15457 936 aa18.6■□□□□ 0.57
CCDC40-201ENST00000269318 PPP1R2P41236 205 aa18.6■□□□□ 0.57
CCDC40-201ENST00000269318 EHHADHQ08426 723 aa18.6■□□□□ 0.57
CCDC40-201ENST00000269318 KCNJ12Q14500 433 aa18.6■□□□□ 0.57
CCDC40-201ENST00000269318 CCAR2Q8N163 923 aaKnown RBP18.6■□□□□ 0.57
CCDC40-201ENST00000269318 CCDC112Q8NEF3 446 aa18.6■□□□□ 0.57
CCDC40-201ENST00000269318 CYP2W1Q8TAV3 490 aa18.6■□□□□ 0.57
CCDC40-201ENST00000269318 DDX12PQ92771 950 aa18.6■□□□□ 0.57
CCDC40-201ENST00000269318 ICAM1P05362 532 aa18.59■□□□□ 0.57
CCDC40-201ENST00000269318 CCNE1P24864 410 aa18.59■□□□□ 0.57
CCDC40-201ENST00000269318 GOLGA8FQ08AF8 430 aa18.59■□□□□ 0.57
CCDC40-201ENST00000269318 GOLGA8DPQ0D2H9 430 aa18.59■□□□□ 0.57
CCDC40-201ENST00000269318 FILIP1LQ4L180 1135 aa18.59■□□□□ 0.57
CCDC40-201ENST00000269318 E4F1Q66K89 784 aaPredicted RBP18.59■□□□□ 0.57
CCDC40-201ENST00000269318 TMEM139Q8IV31 216 aa18.59■□□□□ 0.57
CCDC40-201ENST00000269318 TC2NQ8N9U0 490 aa18.59■□□□□ 0.57
CCDC40-201ENST00000269318 P2RX5Q93086 422 aa18.59■□□□□ 0.57
CCDC40-201ENST00000269318 HPS3Q969F9 1004 aa18.59■□□□□ 0.57
CCDC40-201ENST00000269318 DUSP9Q99956 384 aaKnown RBP18.59■□□□□ 0.57
CCDC40-201ENST00000269318 THAP9Q9H5L6 903 aa18.59■□□□□ 0.57
CCDC40-201ENST00000269318 ZNF112Q9UJU3 913 aa18.59■□□□□ 0.57
CCDC40-201ENST00000269318 VAV3Q9UKW4 847 aa18.59■□□□□ 0.57
CCDC40-201ENST00000269318 KIAA1024Q9UPX6 916 aa18.59■□□□□ 0.57
CCDC40-201ENST00000269318 POTEB3A0JP26 581 aa18.59■□□□□ 0.57
CCDC40-201ENST00000269318 POTECB2RU33 542 aa18.59■□□□□ 0.57
CCDC40-201ENST00000269318 NRDCO43847 1150 aa18.59■□□□□ 0.57
CCDC40-201ENST00000269318 MED24O75448 989 aa18.59■□□□□ 0.57
CCDC40-201ENST00000269318 COPB1P53618 953 aaKnown RBP18.59■□□□□ 0.57
CCDC40-201ENST00000269318 POTEBQ6S5H4 581 aa18.59■□□□□ 0.57
CCDC40-201ENST00000269318 DYMQ7RTS9 669 aa18.59■□□□□ 0.57
CCDC40-201ENST00000269318 PRPF38AQ8NAV1 312 aaKnown RBP18.59■□□□□ 0.57
CCDC40-201ENST00000269318 TRPM4Q8TD43 1214 aa18.59■□□□□ 0.57
CCDC40-201ENST00000269318 DNAJC19Q96DA6 116 aa18.59■□□□□ 0.57
CCDC40-201ENST00000269318 SLF1Q9BQI6 1058 aa18.59■□□□□ 0.57
CCDC40-201ENST00000269318 DOCK1Q14185 1865 aa18.58■□□□□ 0.57
CCDC40-201ENST00000269318 DGKZQ13574 1117 aa18.58■□□□□ 0.56
CCDC40-201ENST00000269318 ANGEL2Q5VTE6 544 aaKnown RBP18.58■□□□□ 0.56
CCDC40-201ENST00000269318 DCAF15Q66K64 600 aa18.58■□□□□ 0.56
CCDC40-201ENST00000269318 HAUS3Q68CZ6 603 aa18.58■□□□□ 0.56
CCDC40-201ENST00000269318 APOBEC3FQ8IUX4 373 aaKnown RBP18.58■□□□□ 0.56
CCDC40-201ENST00000269318 TRIM47Q96LD4 638 aa18.58■□□□□ 0.56
CCDC40-201ENST00000269318 AGBL1Q96MI9 1066 aa18.58■□□□□ 0.56
CCDC40-201ENST00000269318 GPRC5DQ9NZD1 345 aa18.58■□□□□ 0.56
CCDC40-201ENST00000269318 E9PMD0 336 aa18.57■□□□□ 0.56
CCDC40-201ENST00000269318 HOXA7P31268 230 aaPredicted RBP18.57■□□□□ 0.56
CCDC40-201ENST00000269318 SAMD1Q6SPF0 538 aaPredicted RBP18.57■□□□□ 0.56
CCDC40-201ENST00000269318 NOC3LQ8WTT2 800 aaKnown RBP18.57■□□□□ 0.56
CCDC40-201ENST00000269318 C16orf45Q96MC5 204 aaPredicted RBP18.57■□□□□ 0.56
CCDC40-201ENST00000269318 WDR18Q9BV38 432 aa18.57■□□□□ 0.56
CCDC40-201ENST00000269318 SLC39A2Q9NP94 309 aa18.57■□□□□ 0.56
CCDC40-201ENST00000269318 EMILIN3Q9NT22 766 aa18.57■□□□□ 0.56
CCDC40-201ENST00000269318 ITIH6Q6UXX5 1313 aa18.57■□□□□ 0.56
CCDC40-201ENST00000269318 BICDL2A1A5D9 508 aa18.57■□□□□ 0.56
CCDC40-201ENST00000269318 EEF1GP26641 437 aaKnown RBP18.57■□□□□ 0.56
CCDC40-201ENST00000269318 ZNF76P36508 570 aa18.57■□□□□ 0.56
CCDC40-201ENST00000269318 HSD17B4P51659 736 aa18.57■□□□□ 0.56
CCDC40-201ENST00000269318 ANKRD40Q6AI12 368 aa18.57■□□□□ 0.56
CCDC40-201ENST00000269318 NYAP1Q6ZVC0 841 aa18.57■□□□□ 0.56
CCDC40-201ENST00000269318 CATSPER3Q86XQ3 398 aa18.57■□□□□ 0.56
CCDC40-201ENST00000269318 SCYL3Q8IZE3 742 aa18.57■□□□□ 0.56
CCDC40-201ENST00000269318 GPC2Q8N158 579 aa18.57■□□□□ 0.56
CCDC40-201ENST00000269318 ANKRD20A12PQ8NF67 263 aa18.57■□□□□ 0.56
CCDC40-201ENST00000269318 SRRTQ9BXP5 876 aaKnown RBP18.57■□□□□ 0.56
CCDC40-201ENST00000269318 TAB2Q9NYJ8 693 aa18.57■□□□□ 0.56
CCDC40-201ENST00000269318 CCPG1Q9ULG6 757 aa18.57■□□□□ 0.56
CCDC40-201ENST00000269318 DICER1Q9UPY3 1922 aaKnown RBP18.56■□□□□ 0.56
CCDC40-201ENST00000269318 N4BP3O15049 544 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 461.3 ms