RNA–Protein interactions for RNA: ENST00000264951.8

XRN1-201, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XRN1, Length 10,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-201ENST00000264951 PANX2Q96RD6 677 aa5.89□□□□□ -1.47
XRN1-201ENST00000264951 FAM129AQ9BZQ8 928 aa5.89□□□□□ -1.47
XRN1-201ENST00000264951 GPHNQ9NQX3 736 aaPredicted RBP5.89□□□□□ -1.47
XRN1-201ENST00000264951 IL1RAPL1Q9NZN1 696 aa5.89□□□□□ -1.47
XRN1-201ENST00000264951 PIK3C2GO75747 1445 aa5.89□□□□□ -1.47
XRN1-201ENST00000264951 NOP56O00567 594 aaKnown RBP5.89□□□□□ -1.47
XRN1-201ENST00000264951 MED7O43513 233 aa5.89□□□□□ -1.47
XRN1-201ENST00000264951 ST13P50502 369 aaKnown RBP5.89□□□□□ -1.47
XRN1-201ENST00000264951 NR5A1Q13285 461 aa5.89□□□□□ -1.47
XRN1-201ENST00000264951 APPBP2Q92624 585 aa5.89□□□□□ -1.47
XRN1-201ENST00000264951 TMEM245Q9H330 911 aa5.89□□□□□ -1.47
XRN1-201ENST00000264951 E2F6O75461 281 aa5.89□□□□□ -1.47
XRN1-201ENST00000264951 WDR47O94967 919 aa5.89□□□□□ -1.47
XRN1-201ENST00000264951 BRD1O95696 1058 aa5.89□□□□□ -1.47
XRN1-201ENST00000264951 TSPY1Q01534 308 aa5.89□□□□□ -1.47
XRN1-201ENST00000264951 SETD3Q86TU7 594 aaPredicted RBP5.89□□□□□ -1.47
XRN1-201ENST00000264951 U2AF1L4Q8WU68 220 aaKnown RBP5.89□□□□□ -1.47
XRN1-201ENST00000264951 CCDC134Q9H6E4 229 aa5.89□□□□□ -1.47
XRN1-201ENST00000264951 SUFUQ9UMX1 484 aa5.89□□□□□ -1.47
XRN1-201ENST00000264951 OCRLQ01968 901 aa5.89□□□□□ -1.47
XRN1-201ENST00000264951 KLC1Q07866 573 aa5.89□□□□□ -1.47
XRN1-201ENST00000264951 NNTQ13423 1086 aa5.89□□□□□ -1.47
XRN1-201ENST00000264951 MORC3Q14149 939 aa5.89□□□□□ -1.47
XRN1-201ENST00000264951 TERF2Q15554 542 aa5.89□□□□□ -1.47
XRN1-201ENST00000264951 TRIM71Q2Q1W2 868 aaKnown RBP5.89□□□□□ -1.47
XRN1-201ENST00000264951 AASDHQ4L235 1098 aaPredicted RBP5.89□□□□□ -1.47
XRN1-201ENST00000264951 PARP10Q53GL7 1025 aa5.89□□□□□ -1.47
XRN1-201ENST00000264951 CMTM5Q96DZ9 223 aa5.89□□□□□ -1.47
XRN1-201ENST00000264951 QKIQ96PU8 341 aaKnown RBP eCLIP5.89□□□□□ -1.471e-6■■■■■ 37.6
XRN1-201ENST00000264951 DSCC1Q9BVC3 393 aa5.89□□□□□ -1.47
XRN1-201ENST00000264951 TSC22D4Q9Y3Q8 395 aa5.89□□□□□ -1.47
XRN1-201ENST00000264951 IGSF3O75054 1194 aa5.88□□□□□ -1.47
XRN1-201ENST00000264951 AARSP49588 968 aaKnown RBP eCLIP5.88□□□□□ -1.47
XRN1-201ENST00000264951 DNAL1Q4LDG9 190 aa5.88□□□□□ -1.47
XRN1-201ENST00000264951 ELMSAN1Q6PJG2 1045 aa5.88□□□□□ -1.47
XRN1-201ENST00000264951 MXD3Q9BW11 206 aa5.88□□□□□ -1.47
XRN1-201ENST00000264951 MBIPQ9NS73 344 aa5.88□□□□□ -1.47
XRN1-201ENST00000264951 EHD2Q9NZN4 543 aa5.88□□□□□ -1.47
XRN1-201ENST00000264951 RWDD3Q9Y3V2 267 aa5.88□□□□□ -1.47
XRN1-201ENST00000264951 GRIN2BQ13224 1484 aa5.88□□□□□ -1.47
XRN1-201ENST00000264951 FAM95CA0A1B0GW59 222 aa5.88□□□□□ -1.47
XRN1-201ENST00000264951 PRR23AA6NEV1 266 aa5.88□□□□□ -1.47
XRN1-201ENST00000264951 H3BRJ5 948 aa5.88□□□□□ -1.47
XRN1-201ENST00000264951 HGSO14964 777 aaPredicted RBP5.88□□□□□ -1.47
XRN1-201ENST00000264951 INPP5AQ14642 412 aa5.88□□□□□ -1.47
XRN1-201ENST00000264951 CDR2LQ86X02 465 aaPredicted RBP5.88□□□□□ -1.47
XRN1-201ENST00000264951 TRIM59Q8IWR1 403 aa5.88□□□□□ -1.47
XRN1-201ENST00000264951 GCOM2Q9BZD3 368 aaPredicted RBP5.88□□□□□ -1.47
XRN1-201ENST00000264951 SPINK5Q9NQ38 1064 aaPredicted RBP5.88□□□□□ -1.47
XRN1-201ENST00000264951 ZNF229Q9UJW7 825 aa5.88□□□□□ -1.47
XRN1-201ENST00000264951 TOP2BQ02880 1626 aa5.88□□□□□ -1.47
XRN1-201ENST00000264951 ATP5J2-PTCD1G3V325 749 aa5.88□□□□□ -1.47
XRN1-201ENST00000264951 SMAPO00193 183 aa5.88□□□□□ -1.47
XRN1-201ENST00000264951 DIAPH2O60879 1101 aa5.88□□□□□ -1.47
XRN1-201ENST00000264951 PTCD1O75127 700 aaKnown RBP5.88□□□□□ -1.47
XRN1-201ENST00000264951 GCFC2P16383 781 aaKnown RBP5.88□□□□□ -1.47
XRN1-201ENST00000264951 MYCT1Q8N699 235 aa5.88□□□□□ -1.47
XRN1-201ENST00000264951 TNIP2Q8NFZ5 429 aa5.88□□□□□ -1.47
XRN1-201ENST00000264951 MAGOHBQ96A72 148 aaKnown RBP5.88□□□□□ -1.47
XRN1-201ENST00000264951 SNX25Q9H3E2 840 aa5.88□□□□□ -1.47
XRN1-201ENST00000264951 KDM4CQ9H3R0 1056 aa5.88□□□□□ -1.47
XRN1-201ENST00000264951 RNF103-CHMP3A0A140T963 221 aa5.88□□□□□ -1.47
XRN1-201ENST00000264951 VGLL3A8MV65 326 aa5.88□□□□□ -1.47
XRN1-201ENST00000264951 GCNT3O95395 438 aa5.88□□□□□ -1.47
XRN1-201ENST00000264951 ANXA13P27216 316 aa5.88□□□□□ -1.47
XRN1-201ENST00000264951 TP53BP2Q13625 1128 aa5.88□□□□□ -1.47
XRN1-201ENST00000264951 LRRC8EQ6NSJ5 796 aa5.88□□□□□ -1.47
XRN1-201ENST00000264951 MIGA1Q8NAN2 632 aa5.88□□□□□ -1.47
XRN1-201ENST00000264951 PITPNM3Q9BZ71 974 aa5.88□□□□□ -1.47
XRN1-201ENST00000264951 SNTNA6NMZ2 147 aa5.88□□□□□ -1.47
XRN1-201ENST00000264951 CCNT1O60563 726 aaKnown RBP5.88□□□□□ -1.47
XRN1-201ENST00000264951 PRDM1O75626 825 aa5.88□□□□□ -1.47
XRN1-201ENST00000264951 MYSM1Q5VVJ2 828 aa5.88□□□□□ -1.47
XRN1-201ENST00000264951 TPTE2Q6XPS3 522 aa5.88□□□□□ -1.47
XRN1-201ENST00000264951 DDI1Q8WTU0 396 aa5.88□□□□□ -1.47
XRN1-201ENST00000264951 BTBD6Q96KE9 485 aa5.88□□□□□ -1.47
XRN1-201ENST00000264951 ZMYND12Q9H0C1 365 aa5.88□□□□□ -1.47
XRN1-201ENST00000264951 TAB2Q9NYJ8 693 aa5.88□□□□□ -1.47
XRN1-201ENST00000264951 NOD1Q9Y239 953 aa5.88□□□□□ -1.47
XRN1-201ENST00000264951 ZNF839A8K0R7 811 aa5.88□□□□□ -1.47
XRN1-201ENST00000264951 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.88□□□□□ -1.47
XRN1-201ENST00000264951 RFX1P22670 979 aa5.88□□□□□ -1.47
XRN1-201ENST00000264951 ILF2Q12905 390 aaKnown RBP5.88□□□□□ -1.47
XRN1-201ENST00000264951 KPNB1Q14974 876 aaKnown RBP5.88□□□□□ -1.47
XRN1-201ENST00000264951 JDP2Q8WYK2 163 aa5.88□□□□□ -1.47
XRN1-201ENST00000264951 PBXIP1Q96AQ6 731 aa5.88□□□□□ -1.47
XRN1-201ENST00000264951 PPP1R2P1Q96PQ5 205 aa5.88□□□□□ -1.47
XRN1-201ENST00000264951 RAD21L1Q9H4I0 556 aa5.88□□□□□ -1.47
XRN1-201ENST00000264951 KLHL31Q9H511 634 aa5.88□□□□□ -1.47
XRN1-201ENST00000264951 GMEB1Q9Y692 573 aa5.88□□□□□ -1.47
XRN1-201ENST00000264951 ZBBXA8MT70 800 aa5.88□□□□□ -1.47
XRN1-201ENST00000264951 FAM107AO95990 144 aa5.88□□□□□ -1.47
XRN1-201ENST00000264951 TNNI1P19237 187 aa5.88□□□□□ -1.47
XRN1-201ENST00000264951 CA4P22748 312 aa5.88□□□□□ -1.47
XRN1-201ENST00000264951 ARL4AP40617 200 aa5.88□□□□□ -1.47
XRN1-201ENST00000264951 YARSP54577 528 aaKnown RBP5.88□□□□□ -1.47
XRN1-201ENST00000264951 PSMD2Q13200 908 aa5.88□□□□□ -1.47
XRN1-201ENST00000264951 PTK2BQ14289 1009 aa5.88□□□□□ -1.47
XRN1-201ENST00000264951 CADPS2Q86UW7 1296 aa5.88□□□□□ -1.47
XRN1-201ENST00000264951 AGGF1Q8N302 714 aaeCLIP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms