RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 PANK4Q9NVE7 773 aa14.77□□□□□ -0.04
PRPF38A-201ENST00000257181 CAPN9O14815 690 aa14.77□□□□□ -0.05
PRPF38A-201ENST00000257181 XRCC5P13010 732 aaKnown RBP14.77□□□□□ -0.05
PRPF38A-201ENST00000257181 C1orf228Q6PIY5 440 aa14.77□□□□□ -0.05
PRPF38A-201ENST00000257181 SPICE1Q8N0Z3 855 aa14.77□□□□□ -0.05
PRPF38A-201ENST00000257181 MICAL1Q8TDZ2 1067 aa14.77□□□□□ -0.05
PRPF38A-201ENST00000257181 PHLPP1O60346 1717 aa14.77□□□□□ -0.05
PRPF38A-201ENST00000257181 ZBBXA8MT70 800 aa14.77□□□□□ -0.05
PRPF38A-201ENST00000257181 CD19P15391 556 aa14.77□□□□□ -0.05
PRPF38A-201ENST00000257181 CAPN2P17655 700 aa14.77□□□□□ -0.05
PRPF38A-201ENST00000257181 NOGQ13253 232 aa14.77□□□□□ -0.05
PRPF38A-201ENST00000257181 MTMR1Q13613 665 aa14.77□□□□□ -0.05
PRPF38A-201ENST00000257181 CATSPER4Q7RTX7 472 aa14.77□□□□□ -0.05
PRPF38A-201ENST00000257181 OR6J1Q8NGC5 347 aa14.77□□□□□ -0.05
PRPF38A-201ENST00000257181 SEZ6LQ9BYH1 1024 aa14.77□□□□□ -0.05
PRPF38A-201ENST00000257181 PIH1D3Q9NQM4 214 aaKnown RBP14.77□□□□□ -0.05
PRPF38A-201ENST00000257181 INTS5Q6P9B9 1019 aaKnown RBP14.76□□□□□ -0.05
PRPF38A-201ENST00000257181 FBXO33Q7Z6M2 555 aa14.76□□□□□ -0.05
PRPF38A-201ENST00000257181 PLEKHH3Q7Z736 793 aa14.76□□□□□ -0.05
PRPF38A-201ENST00000257181 DDX50Q9BQ39 737 aaKnown RBP14.76□□□□□ -0.05
PRPF38A-201ENST00000257181 FEZ2Q9UHY8 353 aaPredicted RBP14.76□□□□□ -0.05
PRPF38A-201ENST00000257181 COL14A1Q05707 1796 aaKnown RBP14.76□□□□□ -0.05
PRPF38A-201ENST00000257181 RPF1Q9H9Y2 349 aaKnown RBP14.76□□□□□ -0.05
PRPF38A-201ENST00000257181 DAGLAQ9Y4D2 1042 aa14.76□□□□□ -0.05
PRPF38A-201ENST00000257181 BIN1O00499 593 aa14.76□□□□□ -0.05
PRPF38A-201ENST00000257181 EFNA5P52803 228 aa14.76□□□□□ -0.05
PRPF38A-201ENST00000257181 TSPY1Q01534 308 aa14.76□□□□□ -0.05
PRPF38A-201ENST00000257181 CCDC50Q8IVM0 306 aa14.76□□□□□ -0.05
PRPF38A-201ENST00000257181 ZNF302Q9NR11 478 aa14.76□□□□□ -0.05
PRPF38A-201ENST00000257181 A0A0D9SFI3 127 aa14.76□□□□□ -0.05
PRPF38A-201ENST00000257181 NBPF26B4DH59 902 aa14.76□□□□□ -0.05
PRPF38A-201ENST00000257181 INO80B-WBP1J3KQ70 363 aa14.76□□□□□ -0.05
PRPF38A-201ENST00000257181 GAS2O43903 313 aaKnown RBP14.76□□□□□ -0.05
PRPF38A-201ENST00000257181 SARNPP82979 210 aaKnown RBP14.76□□□□□ -0.05
PRPF38A-201ENST00000257181 PRPF4BQ13523 1007 aaKnown RBP14.76□□□□□ -0.05
PRPF38A-201ENST00000257181 SLC9C1Q4G0N8 1177 aa14.76□□□□□ -0.05
PRPF38A-201ENST00000257181 NBPF10Q6P3W6 841 aaKnown RBP14.76□□□□□ -0.05
PRPF38A-201ENST00000257181 DCUN1D2Q6PH85 259 aa14.76□□□□□ -0.05
PRPF38A-201ENST00000257181 ANKRD23Q86SG2 305 aa14.76□□□□□ -0.05
PRPF38A-201ENST00000257181 NBPF15Q8N660 670 aa14.76□□□□□ -0.05
PRPF38A-201ENST00000257181 MRIQ9BWK5 157 aa14.76□□□□□ -0.05
PRPF38A-201ENST00000257181 EHD4Q9H223 541 aa14.76□□□□□ -0.05
PRPF38A-201ENST00000257181 RUFY4Q6ZNE9 571 aa14.75□□□□□ -0.05
PRPF38A-201ENST00000257181 DEFB129Q9H1M3 183 aa14.75□□□□□ -0.05
PRPF38A-201ENST00000257181 SMARCAD1Q9H4L7 1026 aa14.75□□□□□ -0.05
PRPF38A-201ENST00000257181 USP11P51784 963 aa14.75□□□□□ -0.05
PRPF38A-201ENST00000257181 FOXO4P98177 505 aa14.75□□□□□ -0.05
PRPF38A-201ENST00000257181 GSTA5Q7RTV2 222 aa14.75□□□□□ -0.05
PRPF38A-201ENST00000257181 GPR161Q8N6U8 529 aaKnown RBP14.75□□□□□ -0.05
PRPF38A-201ENST00000257181 PPP6R2O75170 966 aa14.75□□□□□ -0.05
PRPF38A-201ENST00000257181 PRELPP51888 382 aa14.75□□□□□ -0.05
PRPF38A-201ENST00000257181 MFAP3P55082 362 aa14.75□□□□□ -0.05
PRPF38A-201ENST00000257181 PPP4CP60510 307 aa14.75□□□□□ -0.05
PRPF38A-201ENST00000257181 PPP2R5EQ16537 467 aa14.75□□□□□ -0.05
PRPF38A-201ENST00000257181 BEST2Q8NFU1 509 aa14.75□□□□□ -0.05
PRPF38A-201ENST00000257181 DCP1AQ9NPI6 582 aaPredicted RBP14.75□□□□□ -0.05
PRPF38A-201ENST00000257181 SYNRGQ9UMZ2 1314 aa14.75□□□□□ -0.05
PRPF38A-201ENST00000257181 CABYRO75952 493 aa14.75□□□□□ -0.05
PRPF38A-201ENST00000257181 MCAMP43121 646 aa14.75□□□□□ -0.05
PRPF38A-201ENST00000257181 PIGSQ96S52 555 aa14.75□□□□□ -0.05
PRPF38A-201ENST00000257181 IQCGQ9H095 443 aaKnown RBP14.75□□□□□ -0.05
PRPF38A-201ENST00000257181 LAMC2Q13753 1193 aa14.74□□□□□ -0.05
PRPF38A-201ENST00000257181 APOA5Q6Q788 366 aa14.74□□□□□ -0.05
PRPF38A-201ENST00000257181 GBP6Q6ZN66 633 aa14.74□□□□□ -0.05
PRPF38A-201ENST00000257181 UBXN4Q92575 508 aa14.74□□□□□ -0.05
PRPF38A-201ENST00000257181 CCDC51Q96ER9 411 aa14.74□□□□□ -0.05
PRPF38A-201ENST00000257181 GLT1D1Q96MS3 346 aa14.74□□□□□ -0.05
PRPF38A-201ENST00000257181 VCPKMTQ9H867 229 aa14.74□□□□□ -0.05
PRPF38A-201ENST00000257181 SEL1LQ9UBV2 794 aa14.74□□□□□ -0.05
PRPF38A-201ENST00000257181 MTRF1LQ9UGC7 380 aaKnown RBP14.74□□□□□ -0.05
PRPF38A-201ENST00000257181 SALL1Q9NSC2 1324 aa14.74□□□□□ -0.05
PRPF38A-201ENST00000257181 RAPGEF1Q13905 1077 aa14.74□□□□□ -0.05
PRPF38A-201ENST00000257181 VEPH1Q14D04 833 aa14.74□□□□□ -0.05
PRPF38A-201ENST00000257181 STRNO43815 780 aa14.74□□□□□ -0.05
PRPF38A-201ENST00000257181 INF2Q27J81 1249 aa14.74□□□□□ -0.05
PRPF38A-201ENST00000257181 CNPY4Q8N129 248 aa14.74□□□□□ -0.05
PRPF38A-201ENST00000257181 PSPC1Q8WXF1 523 aaKnown RBP14.74□□□□□ -0.05
PRPF38A-201ENST00000257181 ZDHHC15Q96MV8 337 aa14.74□□□□□ -0.05
PRPF38A-201ENST00000257181 SRRTQ9BXP5 876 aaKnown RBP14.74□□□□□ -0.05
PRPF38A-201ENST00000257181 IPO11Q9UI26 975 aaKnown RBP14.74□□□□□ -0.05
PRPF38A-201ENST00000257181 AFAP1L2Q8N4X5 818 aa14.74□□□□□ -0.05
PRPF38A-201ENST00000257181 HNRNPDLO14979 420 aaKnown RBP14.73□□□□□ -0.05
PRPF38A-201ENST00000257181 HOXA10P31260 410 aaPredicted RBP14.73□□□□□ -0.05
PRPF38A-201ENST00000257181 POMGNT1Q8WZA1 660 aa14.73□□□□□ -0.05
PRPF38A-201ENST00000257181 EDEM3Q9BZQ6 932 aa14.73□□□□□ -0.05
PRPF38A-201ENST00000257181 TRPV6Q9H1D0 765 aa14.73□□□□□ -0.05
PRPF38A-201ENST00000257181 BZW2Q9Y6E2 419 aaKnown RBP14.73□□□□□ -0.05
PRPF38A-201ENST00000257181 THAP12O43422 761 aa14.73□□□□□ -0.05
PRPF38A-201ENST00000257181 MYSM1Q5VVJ2 828 aa14.73□□□□□ -0.05
PRPF38A-201ENST00000257181 SCFD2Q8WU76 684 aa14.73□□□□□ -0.05
PRPF38A-201ENST00000257181 TTC1Q99614 292 aa14.73□□□□□ -0.05
PRPF38A-201ENST00000257181 RFC5P40937 340 aa14.73□□□□□ -0.05
PRPF38A-201ENST00000257181 MAP7D3Q8IWC1 876 aa14.73□□□□□ -0.05
PRPF38A-201ENST00000257181 KIF20BQ96Q89 1820 aa14.73□□□□□ -0.05
PRPF38A-201ENST00000257181 SYT1P21579 422 aa14.73□□□□□ -0.05
PRPF38A-201ENST00000257181 XPAP23025 273 aaPredicted RBP14.73□□□□□ -0.05
PRPF38A-201ENST00000257181 ALDH3A1P30838 453 aa14.73□□□□□ -0.05
PRPF38A-201ENST00000257181 FAM26FQ5R3K3 315 aa14.73□□□□□ -0.05
PRPF38A-201ENST00000257181 MXD3Q9BW11 206 aa14.73□□□□□ -0.05
PRPF38A-201ENST00000257181 RRAGCQ9HB90 399 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms