RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 HIBADHP31937 336 aaKnown RBP8.19□□□□□ -1.1
RIF1-201ENST00000243326 MRPL12P52815 198 aaKnown RBP8.19□□□□□ -1.1
RIF1-201ENST00000243326 MMS22LQ6ZRQ5 1243 aa8.19□□□□□ -1.1
RIF1-201ENST00000243326 OSBPL1AQ9BXW6 950 aa8.19□□□□□ -1.1
RIF1-201ENST00000243326 MFAP3LO75121 409 aa8.19□□□□□ -1.1
RIF1-201ENST00000243326 TUBBP07437 444 aa8.19□□□□□ -1.1
RIF1-201ENST00000243326 ZNF746Q6NUN9 644 aaPredicted RBP8.19□□□□□ -1.1
RIF1-201ENST00000243326 RNF168Q8IYW5 571 aaPredicted RBP8.19□□□□□ -1.1
RIF1-201ENST00000243326 RNF169Q8NCN4 708 aa8.19□□□□□ -1.1
RIF1-201ENST00000243326 CYP4F11Q9HBI6 524 aa8.19□□□□□ -1.1
RIF1-201ENST00000243326 GINM1Q9NU53 330 aa8.19□□□□□ -1.1
RIF1-201ENST00000243326 UGGT1Q9NYU2 1555 aa8.19□□□□□ -1.1
RIF1-201ENST00000243326 FAM118BQ9BPY3 351 aa8.18□□□□□ -1.1
RIF1-201ENST00000243326 DNAI2Q9GZS0 605 aa8.18□□□□□ -1.1
RIF1-201ENST00000243326 NUP153P49790 1475 aaKnown RBP8.18□□□□□ -1.1
RIF1-201ENST00000243326 KRT1P04264 644 aa8.18□□□□□ -1.1
RIF1-201ENST00000243326 RGS9BPQ6ZS82 235 aa8.18□□□□□ -1.1
RIF1-201ENST00000243326 RAPH1Q70E73 1250 aa8.18□□□□□ -1.1
RIF1-201ENST00000243326 KIF2BQ8N4N8 673 aa8.18□□□□□ -1.1
RIF1-201ENST00000243326 LRRN4CLQ8ND94 238 aa8.18□□□□□ -1.1
RIF1-201ENST00000243326 TEKT1Q969V4 418 aa8.18□□□□□ -1.1
RIF1-201ENST00000243326 EXOC4Q96A65 974 aa8.18□□□□□ -1.1
RIF1-201ENST00000243326 GCC2Q8IWJ2 1684 aa8.18□□□□□ -1.1
RIF1-201ENST00000243326 MED10Q9BTT4 135 aa8.18□□□□□ -1.1
RIF1-201ENST00000243326 DUOX2Q9NRD8 1548 aa8.18□□□□□ -1.1
RIF1-201ENST00000243326 SUPT3HO75486 399 aa8.18□□□□□ -1.1
RIF1-201ENST00000243326 MYL7Q01449 175 aa8.18□□□□□ -1.1
RIF1-201ENST00000243326 C4orf50Q6ZRC1 276 aa8.18□□□□□ -1.1
RIF1-201ENST00000243326 ZNF408Q9H9D4 720 aa8.18□□□□□ -1.1
RIF1-201ENST00000243326 H2AFZP0C0S5 128 aa8.18□□□□□ -1.1
RIF1-201ENST00000243326 PLCG1P19174 1290 aa8.18□□□□□ -1.1
RIF1-201ENST00000243326 VSNL1P62760 191 aa8.18□□□□□ -1.1
RIF1-201ENST00000243326 NUGGCQ68CJ6 796 aa8.18□□□□□ -1.1
RIF1-201ENST00000243326 ISLR2Q6UXK2 745 aa8.18□□□□□ -1.1
RIF1-201ENST00000243326 H2AFVQ71UI9 128 aa8.18□□□□□ -1.1
RIF1-201ENST00000243326 PPWD1Q96BP3 646 aaKnown RBP8.18□□□□□ -1.1
RIF1-201ENST00000243326 MAST3O60307 1309 aa8.18□□□□□ -1.1
RIF1-201ENST00000243326 KDM5CP41229 1560 aa8.18□□□□□ -1.1
RIF1-201ENST00000243326 SCG2P13521 617 aa8.18□□□□□ -1.1
RIF1-201ENST00000243326 GRAMD1BQ3KR37 738 aa8.18□□□□□ -1.1
RIF1-201ENST00000243326 SGO2Q562F6 1265 aa8.18□□□□□ -1.1
RIF1-201ENST00000243326 IL17RAQ96F46 866 aa8.18□□□□□ -1.1
RIF1-201ENST00000243326 YTHDC2Q9H6S0 1430 aaKnown RBP8.18□□□□□ -1.1
RIF1-201ENST00000243326 HDAC9Q9UKV0 1011 aa8.18□□□□□ -1.1
RIF1-201ENST00000243326 SART1O43290 800 aaKnown RBP8.18□□□□□ -1.1
RIF1-201ENST00000243326 SLC39A14Q15043 492 aa8.18□□□□□ -1.1
RIF1-201ENST00000243326 MMEL1Q495T6 779 aa8.18□□□□□ -1.1
RIF1-201ENST00000243326 ZBTB33Q86T24 672 aa8.18□□□□□ -1.1
RIF1-201ENST00000243326 CCDC51Q96ER9 411 aa8.18□□□□□ -1.1
RIF1-201ENST00000243326 MORC2Q9Y6X9 1032 aaPredicted RBP8.18□□□□□ -1.1
RIF1-201ENST00000243326 EP400NLQ6ZTU2 488 aa8.18□□□□□ -1.1
RIF1-201ENST00000243326 TTC17Q96AE7 1141 aa8.18□□□□□ -1.1
RIF1-201ENST00000243326 SEC31BQ9NQW1 1179 aa8.18□□□□□ -1.1
RIF1-201ENST00000243326 POLR1AO95602 1720 aaPredicted RBP8.18□□□□□ -1.1
RIF1-201ENST00000243326 STAT1P42224 750 aa8.18□□□□□ -1.1
RIF1-201ENST00000243326 RPS6KA2Q15349 733 aa8.18□□□□□ -1.1
RIF1-201ENST00000243326 SF3B3Q15393 1217 aaKnown RBP8.18□□□□□ -1.1
RIF1-201ENST00000243326 EXOC3L4Q17RC7 722 aa8.18□□□□□ -1.1
RIF1-201ENST00000243326 RAB20Q9NX57 234 aa8.18□□□□□ -1.1
RIF1-201ENST00000243326 STAM2O75886 525 aa8.18□□□□□ -1.1
RIF1-201ENST00000243326 APOEP02649 317 aa8.18□□□□□ -1.1
RIF1-201ENST00000243326 ARHGAP24Q8N264 748 aa8.18□□□□□ -1.1
RIF1-201ENST00000243326 HSPH1Q92598 858 aa8.18□□□□□ -1.1
RIF1-201ENST00000243326 MAP3K7O43318 606 aa8.17□□□□□ -1.1
RIF1-201ENST00000243326 ABL1P00519 1130 aa8.17□□□□□ -1.1
RIF1-201ENST00000243326 GSTA1P08263 222 aa8.17□□□□□ -1.1
RIF1-201ENST00000243326 GSTA2P09210 222 aa8.17□□□□□ -1.1
RIF1-201ENST00000243326 PARP2Q9UGN5 583 aa8.17□□□□□ -1.1
RIF1-201ENST00000243326 BCORL1Q5H9F3 1711 aa8.17□□□□□ -1.1
RIF1-201ENST00000243326 TOM1O60784 492 aa8.17□□□□□ -1.1
RIF1-201ENST00000243326 ANKMY2Q8IV38 441 aa8.17□□□□□ -1.1
RIF1-201ENST00000243326 TRMT2AQ8IZ69 625 aaKnown RBP8.17□□□□□ -1.1
RIF1-201ENST00000243326 GREM2Q9H772 168 aa8.17□□□□□ -1.1
RIF1-201ENST00000243326 GRIN2AQ12879 1464 aa8.17□□□□□ -1.1
RIF1-201ENST00000243326 PIK3CAP42336 1068 aa8.17□□□□□ -1.1
RIF1-201ENST00000243326 CCDC93Q567U6 631 aa8.17□□□□□ -1.1
RIF1-201ENST00000243326 REXO1Q8N1G1 1221 aaKnown RBP8.17□□□□□ -1.1
RIF1-201ENST00000243326 C19orf44Q9H6X5 657 aa8.17□□□□□ -1.1
RIF1-201ENST00000243326 CLEC11AQ9Y240 323 aa8.17□□□□□ -1.1
RIF1-201ENST00000243326 ATP10BO94823 1461 aa8.17□□□□□ -1.1
RIF1-201ENST00000243326 WDR7Q9Y4E6 1490 aa8.17□□□□□ -1.1
RIF1-201ENST00000243326 SCP2P22307 547 aa8.17□□□□□ -1.1
RIF1-201ENST00000243326 EPHB4P54760 987 aa8.17□□□□□ -1.1
RIF1-201ENST00000243326 IL31Q6EBC2 164 aa8.17□□□□□ -1.1
RIF1-201ENST00000243326 FOXR1Q6PIV2 292 aa8.17□□□□□ -1.1
RIF1-201ENST00000243326 KLHL11Q9NVR0 708 aa8.17□□□□□ -1.1
RIF1-201ENST00000243326 USP17L3A6NCW0 530 aa8.17□□□□□ -1.1
RIF1-201ENST00000243326 USP17L4A6NCW7 530 aa8.17□□□□□ -1.1
RIF1-201ENST00000243326 PRPF6O94906 941 aaKnown RBP8.17□□□□□ -1.1
RIF1-201ENST00000243326 UBTFL6P0CB48 400 aaPredicted RBP8.17□□□□□ -1.1
RIF1-201ENST00000243326 USP17L1Q7RTZ2 530 aa8.17□□□□□ -1.1
RIF1-201ENST00000243326 SPIRE2Q8WWL2 714 aa8.17□□□□□ -1.1
RIF1-201ENST00000243326 DENND2AQ9ULE3 1009 aa8.17□□□□□ -1.1
RIF1-201ENST00000243326 FAM205CA6NFA0 338 aa8.17□□□□□ -1.1
RIF1-201ENST00000243326 XRCC5P13010 732 aaKnown RBP8.17□□□□□ -1.1
RIF1-201ENST00000243326 GAS7O60861 476 aa8.17□□□□□ -1.1
RIF1-201ENST00000243326 RBBP5Q15291 538 aaKnown RBP8.17□□□□□ -1.1
RIF1-201ENST00000243326 SYCE1Q8N0S2 351 aa8.17□□□□□ -1.1
RIF1-201ENST00000243326 ZNF668Q96K58 619 aaPredicted RBP8.17□□□□□ -1.1
RIF1-201ENST00000243326 DDX47Q9H0S4 455 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms