RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 NDUFAB1O14561 156 aa11.48□□□□□ -0.57
TRPS1-201ENST00000220888 EXOC3L4Q17RC7 722 aa11.48□□□□□ -0.57
TRPS1-201ENST00000220888 TUBB8Q3ZCM7 444 aa11.48□□□□□ -0.57
TRPS1-201ENST00000220888 MMEL1Q495T6 779 aa11.48□□□□□ -0.57
TRPS1-201ENST00000220888 CCDC13Q8IYE1 715 aa11.48□□□□□ -0.57
TRPS1-201ENST00000220888 RSRC1Q96IZ7 334 aaKnown RBP11.48□□□□□ -0.57
TRPS1-201ENST00000220888 TMEM206Q9H813 350 aa11.48□□□□□ -0.57
TRPS1-201ENST00000220888 FARP1Q9Y4F1 1045 aaPredicted RBP11.48□□□□□ -0.57
TRPS1-201ENST00000220888 MYO3BQ8WXR4 1341 aa11.48□□□□□ -0.57
TRPS1-201ENST00000220888 RGS16O15492 202 aaPredicted RBP11.48□□□□□ -0.57
TRPS1-201ENST00000220888 SOX5P35711 763 aa11.48□□□□□ -0.57
TRPS1-201ENST00000220888 ASPHQ12797 758 aa11.48□□□□□ -0.57
TRPS1-201ENST00000220888 MORC3Q14149 939 aa11.48□□□□□ -0.57
TRPS1-201ENST00000220888 MYSM1Q5VVJ2 828 aa11.48□□□□□ -0.57
TRPS1-201ENST00000220888 OR6B2Q6IFH4 312 aa11.48□□□□□ -0.57
TRPS1-201ENST00000220888 TCP11Q8WWU5 503 aa11.48□□□□□ -0.57
TRPS1-201ENST00000220888 EDC3Q96F86 508 aaKnown RBP11.48□□□□□ -0.57
TRPS1-201ENST00000220888 DONSONQ9NYP3 566 aa11.48□□□□□ -0.57
TRPS1-201ENST00000220888 LONP1P36776 959 aaKnown RBP11.47□□□□□ -0.57
TRPS1-201ENST00000220888 GRAPQ13588 217 aa11.47□□□□□ -0.57
TRPS1-201ENST00000220888 PPP4R4Q6NUP7 873 aa11.47□□□□□ -0.57
TRPS1-201ENST00000220888 GRAPLQ8TC17 118 aaPredicted RBP11.47□□□□□ -0.57
TRPS1-201ENST00000220888 ZKSCAN5Q9Y2L8 839 aa11.47□□□□□ -0.57
TRPS1-201ENST00000220888 ITSN2Q9NZM3 1697 aa11.47□□□□□ -0.57
TRPS1-201ENST00000220888 JAK2O60674 1132 aa11.47□□□□□ -0.57
TRPS1-201ENST00000220888 STX1BP61266 288 aa11.47□□□□□ -0.57
TRPS1-201ENST00000220888 PNOCQ13519 176 aa11.47□□□□□ -0.57
TRPS1-201ENST00000220888 LMNTD2Q8IXW0 634 aa11.47□□□□□ -0.57
TRPS1-201ENST00000220888 RBM46Q8TBY0 533 aaKnown RBP11.47□□□□□ -0.57
TRPS1-201ENST00000220888 MGARPQ8TDB4 240 aa11.47□□□□□ -0.57
TRPS1-201ENST00000220888 EXOC4Q96A65 974 aa11.47□□□□□ -0.57
TRPS1-201ENST00000220888 UBN2Q6ZU65 1347 aa11.47□□□□□ -0.57
TRPS1-201ENST00000220888 PARD3Q8TEW0 1356 aa11.47□□□□□ -0.57
TRPS1-201ENST00000220888 hCG_1984214I3L0E3 225 aa11.47□□□□□ -0.57
TRPS1-201ENST00000220888 KCNQ3O43525 872 aa11.47□□□□□ -0.57
TRPS1-201ENST00000220888 GTPBP6O43824 516 aaPredicted RBP11.47□□□□□ -0.57
TRPS1-201ENST00000220888 EIF2AK2P19525 551 aaKnown RBP11.47□□□□□ -0.57
TRPS1-201ENST00000220888 PSMC2P35998 433 aaKnown RBP11.47□□□□□ -0.57
TRPS1-201ENST00000220888 TSPY1Q01534 308 aa11.47□□□□□ -0.57
TRPS1-201ENST00000220888 LMNB2Q03252 620 aa11.47□□□□□ -0.57
TRPS1-201ENST00000220888 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.47□□□□□ -0.57
TRPS1-201ENST00000220888 ZNF713Q8N859 430 aaPredicted RBP11.47□□□□□ -0.57
TRPS1-201ENST00000220888 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.47□□□□□ -0.57
TRPS1-201ENST00000220888 ARHGAP42A6NI28 874 aa11.47□□□□□ -0.57
TRPS1-201ENST00000220888 TWF2Q6IBS0 349 aaKnown RBP11.47□□□□□ -0.57
TRPS1-201ENST00000220888 RNF207Q6ZRF8 634 aa11.47□□□□□ -0.57
TRPS1-201ENST00000220888 APOBEC3FQ8IUX4 373 aaKnown RBP11.47□□□□□ -0.57
TRPS1-201ENST00000220888 OR8K1Q8NGG5 319 aa11.47□□□□□ -0.57
TRPS1-201ENST00000220888 CCDC51Q96ER9 411 aa11.47□□□□□ -0.57
TRPS1-201ENST00000220888 TOPORSQ9NS56 1045 aaPredicted RBP11.47□□□□□ -0.57
TRPS1-201ENST00000220888 KCNJ6P48051 423 aa11.46□□□□□ -0.57
TRPS1-201ENST00000220888 KPNA2P52292 529 aaKnown RBP11.46□□□□□ -0.57
TRPS1-201ENST00000220888 MTX1Q13505 466 aa11.46□□□□□ -0.57
TRPS1-201ENST00000220888 WRNIP1Q96S55 665 aa11.46□□□□□ -0.57
TRPS1-201ENST00000220888 MAGEF1Q9HAY2 307 aa11.46□□□□□ -0.57
TRPS1-201ENST00000220888 STK17AQ9UEE5 414 aa11.46□□□□□ -0.57
TRPS1-201ENST00000220888 ZHX2Q9Y6X8 837 aa11.46□□□□□ -0.57
TRPS1-201ENST00000220888 ABCC2Q92887 1545 aa11.46□□□□□ -0.57
TRPS1-201ENST00000220888 LAD1O00515 517 aa11.46□□□□□ -0.57
TRPS1-201ENST00000220888 NOP14P78316 857 aaKnown RBP11.46□□□□□ -0.57
TRPS1-201ENST00000220888 TRIM58Q8NG06 486 aa11.46□□□□□ -0.57
TRPS1-201ENST00000220888 ALKBH8Q96BT7 664 aaKnown RBP11.46□□□□□ -0.57
TRPS1-201ENST00000220888 HEXIM2Q96MH2 286 aaKnown RBP11.46□□□□□ -0.57
TRPS1-201ENST00000220888 PPP1R12CQ9BZL4 782 aa11.46□□□□□ -0.57
TRPS1-201ENST00000220888 IMPACTQ9P2X3 320 aa11.46□□□□□ -0.57
TRPS1-201ENST00000220888 AFF2P51816 1311 aa11.46□□□□□ -0.57
TRPS1-201ENST00000220888 GOLGA8QA0A0J9YX86 632 aa11.46□□□□□ -0.57
TRPS1-201ENST00000220888 GOLGA8OA6NCC3 632 aa11.46□□□□□ -0.57
TRPS1-201ENST00000220888 KIF28PB7ZC32 967 aa11.46□□□□□ -0.57
TRPS1-201ENST00000220888 GOLGA8NF8WBI6 632 aa11.46□□□□□ -0.57
TRPS1-201ENST00000220888 PMLP29590 882 aa11.46□□□□□ -0.57
TRPS1-201ENST00000220888 SLC12A1Q13621 1099 aa11.46□□□□□ -0.57
TRPS1-201ENST00000220888 TSNAXIP1Q2TAA8 658 aa11.46□□□□□ -0.57
TRPS1-201ENST00000220888 ACBD5Q5T8D3 534 aaPredicted RBP11.46□□□□□ -0.57
TRPS1-201ENST00000220888 GIMAP8Q8ND71 665 aaPredicted RBP11.46□□□□□ -0.57
TRPS1-201ENST00000220888 RPGRIP1Q96KN7 1286 aa11.46□□□□□ -0.57
TRPS1-201ENST00000220888 FAM167AQ96KS9 214 aa11.46□□□□□ -0.57
TRPS1-201ENST00000220888 NPHP4O75161 1426 aaPredicted RBP11.46□□□□□ -0.58
TRPS1-201ENST00000220888 SGK1O00141 431 aa11.46□□□□□ -0.58
TRPS1-201ENST00000220888 HSPD1P10809 573 aaKnown RBP11.46□□□□□ -0.58
TRPS1-201ENST00000220888 RASSF2P50749 326 aa11.46□□□□□ -0.58
TRPS1-201ENST00000220888 RBM6P78332 1123 aaKnown RBP11.46□□□□□ -0.58
TRPS1-201ENST00000220888 PSMD2Q13200 908 aa11.46□□□□□ -0.58
TRPS1-201ENST00000220888 ARHGEF18Q6ZSZ5 1173 aa11.46□□□□□ -0.58
TRPS1-201ENST00000220888 FGD4Q96M96 766 aa11.46□□□□□ -0.58
TRPS1-201ENST00000220888 NUDCD1Q96RS6 583 aa11.46□□□□□ -0.58
TRPS1-201ENST00000220888 DDX41Q9UJV9 622 aaKnown RBP11.46□□□□□ -0.58
TRPS1-201ENST00000220888 GRIN3BO60391 1043 aa11.46□□□□□ -0.58
TRPS1-201ENST00000220888 TTC4O95801 387 aa11.46□□□□□ -0.58
TRPS1-201ENST00000220888 LTKP29376 864 aa11.46□□□□□ -0.58
TRPS1-201ENST00000220888 IL1RL1Q01638 556 aa11.46□□□□□ -0.58
TRPS1-201ENST00000220888 CC2D1AQ6P1N0 951 aaPredicted RBP11.46□□□□□ -0.58
TRPS1-201ENST00000220888 OR6B3Q8NGW1 331 aa11.46□□□□□ -0.58
TRPS1-201ENST00000220888 SRP68Q9UHB9 627 aaKnown RBP11.46□□□□□ -0.58
TRPS1-201ENST00000220888 FGAP02671 866 aa11.45□□□□□ -0.58
TRPS1-201ENST00000220888 ADD1P35611 737 aaKnown RBP11.45□□□□□ -0.58
TRPS1-201ENST00000220888 IRX4P78413 519 aa11.45□□□□□ -0.58
TRPS1-201ENST00000220888 SCN4BQ8IWT1 228 aa11.45□□□□□ -0.58
TRPS1-201ENST00000220888 CDC26Q8NHZ8 85 aa11.45□□□□□ -0.58
TRPS1-201ENST00000220888 INHBAP08476 426 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms