RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 ANXA13P27216 316 aa9.5□□□□□ -0.89
TTC28-208ENST00000612946 MED21Q13503 144 aa9.5□□□□□ -0.89
TTC28-208ENST00000612946 KRT81Q14533 505 aa9.5□□□□□ -0.89
TTC28-208ENST00000612946 DTX3LQ8TDB6 740 aa9.5□□□□□ -0.89
TTC28-208ENST00000612946 STK17AQ9UEE5 414 aa9.5□□□□□ -0.89
TTC28-208ENST00000612946 CCDC61Q9Y6R9 512 aa9.5□□□□□ -0.89
TTC28-208ENST00000612946 FAM107AO95990 144 aa9.5□□□□□ -0.89
TTC28-208ENST00000612946 TSC22D1Q15714 1073 aa9.5□□□□□ -0.89
TTC28-208ENST00000612946 TAB2Q9NYJ8 693 aa9.5□□□□□ -0.89
TTC28-208ENST00000612946 ENO4A6NNW6 628 aa9.5□□□□□ -0.89
TTC28-208ENST00000612946 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.5□□□□□ -0.89
TTC28-208ENST00000612946 PFKFB1P16118 471 aa9.5□□□□□ -0.89
TTC28-208ENST00000612946 KIF23Q02241 960 aaPredicted RBP9.5□□□□□ -0.89
TTC28-208ENST00000612946 ARHGAP44Q17R89 818 aa9.5□□□□□ -0.89
TTC28-208ENST00000612946 ATP11BQ9Y2G3 1177 aa9.5□□□□□ -0.89
TTC28-208ENST00000612946 MAGEA13PA6NCF6 341 aa9.5□□□□□ -0.89
TTC28-208ENST00000612946 H2AFZP0C0S5 128 aa9.5□□□□□ -0.89
TTC28-208ENST00000612946 PAPOLAP51003 745 aaKnown RBP9.5□□□□□ -0.89
TTC28-208ENST00000612946 BPIFB4P59827 614 aa9.5□□□□□ -0.89
TTC28-208ENST00000612946 H2AFVQ71UI9 128 aa9.5□□□□□ -0.89
TTC28-208ENST00000612946 PLA2G4DQ86XP0 818 aa9.5□□□□□ -0.89
TTC28-208ENST00000612946 SLC35F6Q8N357 371 aa9.5□□□□□ -0.89
TTC28-208ENST00000612946 INTUQ9ULD6 942 aa9.5□□□□□ -0.89
TTC28-208ENST00000612946 MTMR6Q9Y217 621 aa9.5□□□□□ -0.89
TTC28-208ENST00000612946 MAGI1Q96QZ7 1491 aaPredicted RBP9.5□□□□□ -0.89
TTC28-208ENST00000612946 PITPNM2Q9BZ72 1349 aa9.5□□□□□ -0.89
TTC28-208ENST00000612946 PPP6R2O75170 966 aa9.49□□□□□ -0.89
TTC28-208ENST00000612946 KRT7P08729 469 aa9.49□□□□□ -0.89
TTC28-208ENST00000612946 ZNF513Q8N8E2 541 aaPredicted RBP9.49□□□□□ -0.89
TTC28-208ENST00000612946 THAP11Q96EK4 314 aa9.49□□□□□ -0.89
TTC28-208ENST00000612946 TEX12Q9BXU0 123 aa9.49□□□□□ -0.89
TTC28-208ENST00000612946 PAPOLBQ9NRJ5 636 aaKnown RBP9.49□□□□□ -0.89
TTC28-208ENST00000612946 TSPY3P0CV98 308 aa9.49□□□□□ -0.89
TTC28-208ENST00000612946 TSPY8P0CW00 308 aa9.49□□□□□ -0.89
TTC28-208ENST00000612946 TSPY1Q01534 308 aa9.49□□□□□ -0.89
TTC28-208ENST00000612946 RCN2Q14257 317 aa9.49□□□□□ -0.89
TTC28-208ENST00000612946 DCUN1D2Q6PH85 259 aa9.49□□□□□ -0.89
TTC28-208ENST00000612946 CDAN1Q8IWY9 1227 aa9.49□□□□□ -0.89
TTC28-208ENST00000612946 DDHD1Q8NEL9 900 aa9.49□□□□□ -0.89
TTC28-208ENST00000612946 ZNF277Q9NRM2 450 aaPredicted RBP9.49□□□□□ -0.89
TTC28-208ENST00000612946 B4GALNT2Q8NHY0 566 aa9.49□□□□□ -0.89
TTC28-208ENST00000612946 PLAAQ9Y263 795 aa9.49□□□□□ -0.89
TTC28-208ENST00000612946 RWDD3Q9Y3V2 267 aa9.49□□□□□ -0.89
TTC28-208ENST00000612946 ABCC5O15440 1437 aa9.49□□□□□ -0.89
TTC28-208ENST00000612946 ABCA10Q8WWZ4 1543 aa9.49□□□□□ -0.89
TTC28-208ENST00000612946 FLOT2Q14254 428 aa9.49□□□□□ -0.89
TTC28-208ENST00000612946 ITIH4Q14624 930 aa9.49□□□□□ -0.89
TTC28-208ENST00000612946 SBNO1A3KN83 1393 aa9.49□□□□□ -0.89
TTC28-208ENST00000612946 SLFN14P0C7P3 912 aa9.49□□□□□ -0.89
TTC28-208ENST00000612946 SERPINB3P29508 390 aa9.49□□□□□ -0.89
TTC28-208ENST00000612946 SKAP1Q86WV1 359 aa9.49□□□□□ -0.89
TTC28-208ENST00000612946 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.49□□□□□ -0.89
TTC28-208ENST00000612946 ZFRQ96KR1 1074 aaKnown RBP9.49□□□□□ -0.89
TTC28-208ENST00000612946 CCDC8Q9H0W5 538 aaPredicted RBP9.49□□□□□ -0.89
TTC28-208ENST00000612946 SLITRK6Q9H5Y7 841 aa9.49□□□□□ -0.89
TTC28-208ENST00000612946 PKD2L2Q9NZM6 624 aa9.49□□□□□ -0.89
TTC28-208ENST00000612946 AREL1O15033 823 aa9.49□□□□□ -0.89
TTC28-208ENST00000612946 GGPS1O95749 300 aa9.49□□□□□ -0.89
TTC28-208ENST00000612946 TRIM56Q9BRZ2 755 aaKnown RBP9.49□□□□□ -0.89
TTC28-208ENST00000612946 EPS8L2Q9H6S3 715 aa9.49□□□□□ -0.89
TTC28-208ENST00000612946 RWDD2AQ9UIY3 292 aa9.49□□□□□ -0.89
TTC28-208ENST00000612946 EXOC1LA0A1B0GW35 172 aa9.49□□□□□ -0.89
TTC28-208ENST00000612946 GRM8O00222 908 aa9.49□□□□□ -0.89
TTC28-208ENST00000612946 KRT16P08779 473 aa9.49□□□□□ -0.89
TTC28-208ENST00000612946 ZBED6P86452 979 aa9.49□□□□□ -0.89
TTC28-208ENST00000612946 RINT1Q6NUQ1 792 aa9.49□□□□□ -0.89
TTC28-208ENST00000612946 RAB44Q7Z6P3 723 aaPredicted RBP9.49□□□□□ -0.89
TTC28-208ENST00000612946 KRT6AP02538 564 aa9.49□□□□□ -0.89
TTC28-208ENST00000612946 KRT6BP04259 564 aa9.49□□□□□ -0.89
TTC28-208ENST00000612946 MYL6BP14649 208 aa9.49□□□□□ -0.89
TTC28-208ENST00000612946 KRT6CP48668 564 aa9.49□□□□□ -0.89
TTC28-208ENST00000612946 ST13P50502 369 aaKnown RBP9.49□□□□□ -0.89
TTC28-208ENST00000612946 COPB1P53618 953 aaKnown RBP9.49□□□□□ -0.89
TTC28-208ENST00000612946 TRAPPC9Q96Q05 1148 aa9.49□□□□□ -0.89
TTC28-208ENST00000612946 DSCC1Q9BVC3 393 aa9.49□□□□□ -0.89
TTC28-208ENST00000612946 KDM4CQ9H3R0 1056 aa9.49□□□□□ -0.89
TTC28-208ENST00000612946 ABCF2Q9UG63 623 aa9.49□□□□□ -0.89
TTC28-208ENST00000612946 ARIH1Q9Y4X5 557 aaPredicted RBP9.49□□□□□ -0.89
TTC28-208ENST00000612946 RIMS2Q9UQ26 1411 aa9.48□□□□□ -0.89
TTC28-208ENST00000612946 ADGRA3Q8IWK6 1321 aa9.48□□□□□ -0.89
TTC28-208ENST00000612946 MAP4P27816 1152 aaKnown RBP9.48□□□□□ -0.89
TTC28-208ENST00000612946 NUP107P57740 925 aa9.48□□□□□ -0.89
TTC28-208ENST00000612946 TRIM16LQ309B1 348 aa9.48□□□□□ -0.89
TTC28-208ENST00000612946 CCDC134Q9H6E4 229 aa9.48□□□□□ -0.89
TTC28-208ENST00000612946 DDX28Q9NUL7 540 aaKnown RBP9.48□□□□□ -0.89
TTC28-208ENST00000612946 CLASP2O75122 1294 aaKnown RBP9.48□□□□□ -0.89
TTC28-208ENST00000612946 PPP1R37O75864 691 aa9.48□□□□□ -0.89
TTC28-208ENST00000612946 P4HA1P13674 534 aa9.48□□□□□ -0.89
TTC28-208ENST00000612946 GJC1P36383 396 aa9.48□□□□□ -0.89
TTC28-208ENST00000612946 CTCFP49711 727 aaPredicted RBP9.48□□□□□ -0.89
TTC28-208ENST00000612946 AGBL2Q5U5Z8 902 aa9.48□□□□□ -0.89
TTC28-208ENST00000612946 EP400NLQ6ZTU2 488 aa9.48□□□□□ -0.89
TTC28-208ENST00000612946 PPP1R14BQ96C90 147 aa9.48□□□□□ -0.89
TTC28-208ENST00000612946 MRPS26Q9BYN8 205 aaKnown RBP9.48□□□□□ -0.89
TTC28-208ENST00000612946 GOLGA8TH3BQL2 631 aa9.48□□□□□ -0.89
TTC28-208ENST00000612946 GOLGA8HP0CJ92 632 aa9.48□□□□□ -0.89
TTC28-208ENST00000612946 NOSTRINQ8IVI9 506 aa9.48□□□□□ -0.89
TTC28-208ENST00000612946 DR1Q01658 176 aa9.48□□□□□ -0.89
TTC28-208ENST00000612946 MAPRE2Q15555 327 aa9.48□□□□□ -0.89
TTC28-208ENST00000612946 NUGGCQ68CJ6 796 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms