RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 TPCN1Q9ULQ1 816 aa9.45□□□□□ -0.9
CSMD1-216ENST00000602557 DAAM1Q9Y4D1 1078 aa9.45□□□□□ -0.9
CSMD1-216ENST00000602557 RINLQ6ZS11 566 aa9.45□□□□□ -0.9
CSMD1-216ENST00000602557 SPTLC3Q9NUV7 552 aa9.45□□□□□ -0.9
CSMD1-216ENST00000602557 KIAA1468Q9P260 1216 aa9.45□□□□□ -0.9
CSMD1-216ENST00000602557 PCDHB13Q9Y5F0 798 aa9.45□□□□□ -0.9
CSMD1-216ENST00000602557 DAB2P98082 770 aa9.45□□□□□ -0.9
CSMD1-216ENST00000602557 ACBD5Q5T8D3 534 aaPredicted RBP9.45□□□□□ -0.9
CSMD1-216ENST00000602557 PALM2Q8IXS6 379 aa9.45□□□□□ -0.9
CSMD1-216ENST00000602557 RDH13Q8NBN7 331 aa9.45□□□□□ -0.9
CSMD1-216ENST00000602557 MROH5Q6ZUA9 1318 aa9.44□□□□□ -0.9
CSMD1-216ENST00000602557 NSMCE1Q8WV22 266 aa9.44□□□□□ -0.9
CSMD1-216ENST00000602557 GPKOWQ92917 476 aaPredicted RBP eCLIP9.44□□□□□ -0.9
CSMD1-216ENST00000602557 KIF2CQ99661 725 aa9.44□□□□□ -0.9
CSMD1-216ENST00000602557 KDM3AQ9Y4C1 1321 aa9.44□□□□□ -0.9
CSMD1-216ENST00000602557 MCF2P10911 925 aa9.44□□□□□ -0.9
CSMD1-216ENST00000602557 ZSCAN20P17040 1043 aaPredicted RBP9.44□□□□□ -0.9
CSMD1-216ENST00000602557 MRPS15P82914 257 aaKnown RBP9.44□□□□□ -0.9
CSMD1-216ENST00000602557 RASSF7Q02833 373 aa9.44□□□□□ -0.9
CSMD1-216ENST00000602557 LBHD1Q9BQE6 289 aaPredicted RBP9.44□□□□□ -0.9
CSMD1-216ENST00000602557 RIC8AQ9NPQ8 531 aa9.44□□□□□ -0.9
CSMD1-216ENST00000602557 SERTAD1Q9UHV2 236 aa9.44□□□□□ -0.9
CSMD1-216ENST00000602557 NUMA1Q14980 2115 aa9.44□□□□□ -0.9
CSMD1-216ENST00000602557 A0A0D9SFI3 127 aa9.44□□□□□ -0.9
CSMD1-216ENST00000602557 P4HA1P13674 534 aa9.44□□□□□ -0.9
CSMD1-216ENST00000602557 PHBP35232 272 aa9.44□□□□□ -0.9
CSMD1-216ENST00000602557 NLRP14Q86W24 1093 aa9.44□□□□□ -0.9
CSMD1-216ENST00000602557 CHCHD3Q9NX63 227 aaKnown RBP9.44□□□□□ -0.9
CSMD1-216ENST00000602557 NFU1Q9UMS0 254 aa9.44□□□□□ -0.9
CSMD1-216ENST00000602557 FRMPD2Q68DX3 1309 aaPredicted RBP9.44□□□□□ -0.9
CSMD1-216ENST00000602557 SHANK2Q9UPX8 1470 aa9.44□□□□□ -0.9
CSMD1-216ENST00000602557 CFLARO15519 480 aa9.44□□□□□ -0.9
CSMD1-216ENST00000602557 WBP4O75554 376 aaKnown RBP9.44□□□□□ -0.9
CSMD1-216ENST00000602557 KCNA4P22459 653 aa9.44□□□□□ -0.9
CSMD1-216ENST00000602557 GCKRQ14397 625 aa9.44□□□□□ -0.9
CSMD1-216ENST00000602557 UHRF1BP1Q6BDS2 1440 aa9.44□□□□□ -0.9
CSMD1-216ENST00000602557 MYO1FO00160 1098 aa9.44□□□□□ -0.9
CSMD1-216ENST00000602557 EEF1GP26641 437 aaKnown RBP9.44□□□□□ -0.9
CSMD1-216ENST00000602557 LAMB3Q13751 1172 aa9.44□□□□□ -0.9
CSMD1-216ENST00000602557 NBPF9Q3BBW0 867 aa9.44□□□□□ -0.9
CSMD1-216ENST00000602557 BRDTQ58F21 947 aaPredicted RBP9.44□□□□□ -0.9
CSMD1-216ENST00000602557 RFX8Q6ZV50 586 aa9.44□□□□□ -0.9
CSMD1-216ENST00000602557 TRIML2Q8N7C3 387 aa9.44□□□□□ -0.9
CSMD1-216ENST00000602557 KDRP35968 1356 aa9.44□□□□□ -0.9
CSMD1-216ENST00000602557 DIAPH2O60879 1101 aa9.44□□□□□ -0.9
CSMD1-216ENST00000602557 GNA14O95837 355 aa9.44□□□□□ -0.9
CSMD1-216ENST00000602557 GCP02774 474 aa9.44□□□□□ -0.9
CSMD1-216ENST00000602557 CASP14P31944 242 aa9.44□□□□□ -0.9
CSMD1-216ENST00000602557 PPARAQ07869 468 aa9.44□□□□□ -0.9
CSMD1-216ENST00000602557 CCDC15Q0P6D6 951 aa9.44□□□□□ -0.9
CSMD1-216ENST00000602557 SLC44A4Q53GD3 710 aa9.44□□□□□ -0.9
CSMD1-216ENST00000602557 MLXIPLQ9NP71 852 aa9.44□□□□□ -0.9
CSMD1-216ENST00000602557 ZBTB41Q5SVQ8 909 aa9.44□□□□□ -0.9
CSMD1-216ENST00000602557 RGS9BPQ6ZS82 235 aa9.44□□□□□ -0.9
CSMD1-216ENST00000602557 TOGARAM2Q6ZUX3 1019 aa9.44□□□□□ -0.9
CSMD1-216ENST00000602557 ZNF654Q8IZM8 581 aa9.44□□□□□ -0.9
CSMD1-216ENST00000602557 IL17RAQ96F46 866 aa9.44□□□□□ -0.9
CSMD1-216ENST00000602557 KRT82Q9NSB4 513 aa9.44□□□□□ -0.9
CSMD1-216ENST00000602557 ZMYM6O95789 1325 aa9.44□□□□□ -0.9
CSMD1-216ENST00000602557 ATP10BO94823 1461 aa9.44□□□□□ -0.9
CSMD1-216ENST00000602557 USP27XA6NNY8 438 aa9.44□□□□□ -0.9
CSMD1-216ENST00000602557 PDE8AO60658 829 aa9.44□□□□□ -0.9
CSMD1-216ENST00000602557 ZRANB2O95218 330 aaKnown RBP eCLIP9.44□□□□□ -0.9
CSMD1-216ENST00000602557 ZAP70P43403 619 aa9.44□□□□□ -0.9
CSMD1-216ENST00000602557 BTG4Q9NY30 223 aa9.44□□□□□ -0.9
CSMD1-216ENST00000602557 SMCO2A6NFE2 343 aa9.44□□□□□ -0.9
CSMD1-216ENST00000602557 WDR46O15213 610 aaKnown RBP9.44□□□□□ -0.9
CSMD1-216ENST00000602557 TRIM50Q86XT4 487 aa9.44□□□□□ -0.9
CSMD1-216ENST00000602557 CYP4F22Q6NT55 531 aa9.43□□□□□ -0.9
CSMD1-216ENST00000602557 ESYT2A0FGR8 921 aa9.43□□□□□ -0.9
CSMD1-216ENST00000602557 TRAF3IP3Q9Y228 551 aa9.43□□□□□ -0.9
CSMD1-216ENST00000602557 PEG3Q9GZU2 1588 aa9.43□□□□□ -0.9
CSMD1-216ENST00000602557 K7ENM7 598 aa9.43□□□□□ -0.9
CSMD1-216ENST00000602557 SAT1P21673 171 aa9.43□□□□□ -0.9
CSMD1-216ENST00000602557 ADCY9O60503 1353 aa9.43□□□□□ -0.9
CSMD1-216ENST00000602557 DMPKQ09013 629 aa9.43□□□□□ -0.9
CSMD1-216ENST00000602557 LPIN2Q92539 896 aa9.43□□□□□ -0.9
CSMD1-216ENST00000602557 ZSCAN10Q96SZ4 725 aaPredicted RBP9.43□□□□□ -0.9
CSMD1-216ENST00000602557 ZNF408Q9H9D4 720 aa9.43□□□□□ -0.9
CSMD1-216ENST00000602557 CACYBPQ9HB71 228 aaKnown RBP9.43□□□□□ -0.9
CSMD1-216ENST00000602557 LGR6Q9HBX8 967 aa9.43□□□□□ -0.9
CSMD1-216ENST00000602557 RAB20Q9NX57 234 aa9.43□□□□□ -0.9
CSMD1-216ENST00000602557 EPS15L1Q9UBC2 864 aa9.43□□□□□ -0.9
CSMD1-216ENST00000602557 IVNS1ABPQ9Y6Y0 642 aa9.43□□□□□ -0.9
CSMD1-216ENST00000602557 MOCS3O95396 460 aa9.43□□□□□ -0.9
CSMD1-216ENST00000602557 GSTA1P08263 222 aa9.43□□□□□ -0.9
CSMD1-216ENST00000602557 GSTA2P09210 222 aa9.43□□□□□ -0.9
CSMD1-216ENST00000602557 KRT3P12035 628 aa9.43□□□□□ -0.9
CSMD1-216ENST00000602557 TECP42680 631 aa9.43□□□□□ -0.9
CSMD1-216ENST00000602557 DNM2P50570 870 aa9.43□□□□□ -0.9
CSMD1-216ENST00000602557 LMNB2Q03252 620 aa9.43□□□□□ -0.9
CSMD1-216ENST00000602557 ENAHQ8N8S7 591 aaPredicted RBP9.43□□□□□ -0.9
CSMD1-216ENST00000602557 EEF2KMTQ96G04 330 aa9.43□□□□□ -0.9
CSMD1-216ENST00000602557 RIOK1Q9BRS2 568 aaKnown RBP9.43□□□□□ -0.9
CSMD1-216ENST00000602557 ANTXR1Q9H6X2 564 aa9.43□□□□□ -0.9
CSMD1-216ENST00000602557 MAST3O60307 1309 aa9.43□□□□□ -0.9
CSMD1-216ENST00000602557 STXBP3O00186 592 aa9.43□□□□□ -0.9
CSMD1-216ENST00000602557 STAT1P42224 750 aa9.43□□□□□ -0.9
CSMD1-216ENST00000602557 YARSP54577 528 aaKnown RBP9.43□□□□□ -0.9
CSMD1-216ENST00000602557 IQCDQ96DY2 449 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms