RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 ASIC1P78348 528 aa22.08■■□□□ 1.12
CLIP3-206ENST00000593074 JAG1P78504 1218 aa22.08■■□□□ 1.12
CLIP3-206ENST00000593074 GOLGA6L9A6NEM1 432 aa22.07■■□□□ 1.12
CLIP3-206ENST00000593074 POTEMA6NI47 508 aa22.07■■□□□ 1.12
CLIP3-206ENST00000593074 EEF1GP26641 437 aaKnown RBP22.07■■□□□ 1.12
CLIP3-206ENST00000593074 CXCL9Q07325 125 aa22.07■■□□□ 1.12
CLIP3-206ENST00000593074 RRP1BQ14684 758 aaKnown RBP22.07■■□□□ 1.12
CLIP3-206ENST00000593074 TRIM65Q6PJ69 517 aa22.07■■□□□ 1.12
CLIP3-206ENST00000593074 MTMR14Q8NCE2 650 aa22.07■■□□□ 1.12
CLIP3-206ENST00000593074 TAB2Q9NYJ8 693 aa22.07■■□□□ 1.12
CLIP3-206ENST00000593074 PCDHA1Q9Y5I3 950 aa22.07■■□□□ 1.12
CLIP3-206ENST00000593074 FECHP22830 423 aa22.07■■□□□ 1.12
CLIP3-206ENST00000593074 PDE4DQ08499 809 aa22.07■■□□□ 1.12
CLIP3-206ENST00000593074 NCBP1Q09161 790 aaKnown RBP22.07■■□□□ 1.12
CLIP3-206ENST00000593074 TMEM119Q4V9L6 283 aa22.07■■□□□ 1.12
CLIP3-206ENST00000593074 FKBP1CQ5VVH2 108 aa22.07■■□□□ 1.12
CLIP3-206ENST00000593074 TOGARAM2Q6ZUX3 1019 aa22.07■■□□□ 1.12
CLIP3-206ENST00000593074 SV2BQ7L1I2 683 aa22.07■■□□□ 1.12
CLIP3-206ENST00000593074 CNGA4Q8IV77 575 aa22.07■■□□□ 1.12
CLIP3-206ENST00000593074 NOC3LQ8WTT2 800 aaKnown RBP22.07■■□□□ 1.12
CLIP3-206ENST00000593074 HAS1Q92839 578 aa22.07■■□□□ 1.12
CLIP3-206ENST00000593074 CCDC51Q96ER9 411 aa22.07■■□□□ 1.12
CLIP3-206ENST00000593074 VPS16Q9H269 839 aa22.07■■□□□ 1.12
CLIP3-206ENST00000593074 L2HGDHQ9H9P8 463 aa22.07■■□□□ 1.12
CLIP3-206ENST00000593074 SYNPO2Q9UMS6 1093 aa22.07■■□□□ 1.12
CLIP3-206ENST00000593074 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.07■■□□□ 1.12
CLIP3-206ENST00000593074 TRIM14Q14142 442 aa22.06■■□□□ 1.12
CLIP3-206ENST00000593074 LARP4BQ92615 738 aaKnown RBP22.06■■□□□ 1.12
CLIP3-206ENST00000593074 VEZTQ9HBM0 779 aa22.06■■□□□ 1.12
CLIP3-206ENST00000593074 KIF13BQ9NQT8 1826 aa22.06■■□□□ 1.12
CLIP3-206ENST00000593074 NDUFB10O96000 172 aa22.05■■□□□ 1.12
CLIP3-206ENST00000593074 STK4Q13043 487 aa22.05■■□□□ 1.12
CLIP3-206ENST00000593074 KRT79Q5XKE5 535 aa22.05■■□□□ 1.12
CLIP3-206ENST00000593074 CNNM4Q6P4Q7 775 aa22.05■■□□□ 1.12
CLIP3-206ENST00000593074 SNX29Q8TEQ0 813 aa22.05■■□□□ 1.12
CLIP3-206ENST00000593074 CDK5RAP3Q96JB5 506 aa22.05■■□□□ 1.12
CLIP3-206ENST00000593074 TRIM47Q96LD4 638 aa22.05■■□□□ 1.12
CLIP3-206ENST00000593074 CCNE1P24864 410 aa22.05■■□□□ 1.12
CLIP3-206ENST00000593074 CASP14P31944 242 aa22.05■■□□□ 1.12
CLIP3-206ENST00000593074 JDP2Q8WYK2 163 aa22.05■■□□□ 1.12
CLIP3-206ENST00000593074 P2RX5Q93086 422 aa22.05■■□□□ 1.12
CLIP3-206ENST00000593074 DUSP9Q99956 384 aaKnown RBP22.05■■□□□ 1.12
CLIP3-206ENST00000593074 MTFR1LQ9H019 292 aa22.05■■□□□ 1.12
CLIP3-206ENST00000593074 TAOK3Q9H2K8 898 aa22.05■■□□□ 1.12
CLIP3-206ENST00000593074 CNTNAP1P78357 1384 aa22.04■■□□□ 1.12
CLIP3-206ENST00000593074 BICDL2A1A5D9 508 aa22.04■■□□□ 1.12
CLIP3-206ENST00000593074 USP17L15C9J2P7 530 aa22.04■■□□□ 1.12
CLIP3-206ENST00000593074 USP17L13C9JLJ4 530 aa22.04■■□□□ 1.12
CLIP3-206ENST00000593074 USP17L11C9JVI0 530 aa22.04■■□□□ 1.12
CLIP3-206ENST00000593074 USP17L18D6R9N7 530 aa22.04■■□□□ 1.12
CLIP3-206ENST00000593074 USP17L22D6RA61 530 aa22.04■■□□□ 1.12
CLIP3-206ENST00000593074 USP17L17D6RBQ6 530 aa22.04■■□□□ 1.12
CLIP3-206ENST00000593074 USP17L19D6RCP7 530 aa22.04■■□□□ 1.12
CLIP3-206ENST00000593074 USP17L20D6RJB6 530 aa22.04■■□□□ 1.12
CLIP3-206ENST00000593074 FXR1P51114 621 aaKnown RBP eCLIP22.04■■□□□ 1.12
CLIP3-206ENST00000593074 USP17L24Q0WX57 530 aa22.04■■□□□ 1.12
CLIP3-206ENST00000593074 AP3B2Q13367 1082 aa22.04■■□□□ 1.12
CLIP3-206ENST00000593074 CIAPIN1Q6FI81 312 aa22.04■■□□□ 1.12
CLIP3-206ENST00000593074 USP17L6PQ6QN14 398 aa22.04■■□□□ 1.12
CLIP3-206ENST00000593074 RAD54LQ92698 747 aa22.04■■□□□ 1.12
CLIP3-206ENST00000593074 PVALEFA0A1B0GWK0 134 aa22.03■■□□□ 1.12
CLIP3-206ENST00000593074 LGALS16A8MUM7 142 aa22.03■■□□□ 1.12
CLIP3-206ENST00000593074 TPM1P09493 284 aa22.03■■□□□ 1.12
CLIP3-206ENST00000593074 BMP3P12645 472 aa22.03■■□□□ 1.12
CLIP3-206ENST00000593074 USP11P51784 963 aa22.03■■□□□ 1.12
CLIP3-206ENST00000593074 MCM6Q14566 821 aa22.03■■□□□ 1.12
CLIP3-206ENST00000593074 MBOAT7Q96N66 472 aa22.03■■□□□ 1.12
CLIP3-206ENST00000593074 NUP88Q99567 741 aaPredicted RBP22.03■■□□□ 1.12
CLIP3-206ENST00000593074 SRRTQ9BXP5 876 aaKnown RBP22.03■■□□□ 1.12
CLIP3-206ENST00000593074 ANO3Q9BYT9 981 aa22.03■■□□□ 1.12
CLIP3-206ENST00000593074 CYP3A7-CYP3A51PA0A087WV96 503 aa22.03■■□□□ 1.12
CLIP3-206ENST00000593074 A0A1W2PRG0 241 aa22.03■■□□□ 1.12
CLIP3-206ENST00000593074 MYMKA6NI61 221 aa22.03■■□□□ 1.12
CLIP3-206ENST00000593074 MEIS2O14770 477 aa22.03■■□□□ 1.12
CLIP3-206ENST00000593074 FCER1AP12319 257 aa22.03■■□□□ 1.12
CLIP3-206ENST00000593074 CYP3A7P24462 503 aa22.03■■□□□ 1.12
CLIP3-206ENST00000593074 IKQ13123 557 aaPredicted RBP22.03■■□□□ 1.12
CLIP3-206ENST00000593074 MOXD1Q6UVY6 613 aa22.03■■□□□ 1.12
CLIP3-206ENST00000593074 BTNL9Q6UXG8 535 aa22.03■■□□□ 1.12
CLIP3-206ENST00000593074 UNC13DQ70J99 1090 aa22.03■■□□□ 1.12
CLIP3-206ENST00000593074 FAM83AQ86UY5 434 aa22.03■■□□□ 1.12
CLIP3-206ENST00000593074 KIAA0895Q8NCT3 520 aa22.03■■□□□ 1.12
CLIP3-206ENST00000593074 CPLX3Q8WVH0 158 aa22.03■■□□□ 1.12
CLIP3-206ENST00000593074 NUDT12Q9BQG2 462 aa22.03■■□□□ 1.12
CLIP3-206ENST00000593074 AMNQ9BXJ7 453 aa22.03■■□□□ 1.12
CLIP3-206ENST00000593074 ARHGEF10LQ9HCE6 1279 aa22.03■■□□□ 1.12
CLIP3-206ENST00000593074 ZNF215Q9UL58 517 aaPredicted RBP22.03■■□□□ 1.12
CLIP3-206ENST00000593074 GOLGB1Q14789 3259 aaKnown RBP22.02■■□□□ 1.12
CLIP3-206ENST00000593074 SOWAHDA6NJG2 315 aa22.02■■□□□ 1.12
CLIP3-206ENST00000593074 HYIQ5T013 277 aa22.02■■□□□ 1.12
CLIP3-206ENST00000593074 SYDE2Q5VT97 1194 aa22.02■■□□□ 1.12
CLIP3-206ENST00000593074 MCTP2Q6DN12 878 aa22.02■■□□□ 1.12
CLIP3-206ENST00000593074 CSGALNACT2Q8N6G5 542 aa22.02■■□□□ 1.12
CLIP3-206ENST00000593074 CRYGNQ8WXF5 182 aa22.02■■□□□ 1.12
CLIP3-206ENST00000593074 KCNMB3Q9NPA1 279 aa22.02■■□□□ 1.12
CLIP3-206ENST00000593074 PPP1R1BQ9UD71 204 aaPredicted RBP22.02■■□□□ 1.12
CLIP3-206ENST00000593074 A0A1W2PQC6 194 aa22.02■■□□□ 1.11
CLIP3-206ENST00000593074 TBC1D12O60347 775 aa22.02■■□□□ 1.11
CLIP3-206ENST00000593074 HOXA7P31268 230 aaPredicted RBP22.02■■□□□ 1.11
CLIP3-206ENST00000593074 UBXN1Q04323 297 aa22.02■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms