RNA–Protein interactions for RNA: ENST00000587220.5

ZNF540-205, Transcript of zinc finger protein 540, humanhuman

TSL 2

Gene ZNF540, Length 576 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-205ENST00000587220 KPNA6O60684 536 aa12.39□□□□□ -0.43
ZNF540-205ENST00000587220 CD4P01730 458 aa12.39□□□□□ -0.43
ZNF540-205ENST00000587220 CYP2C18P33260 490 aa12.39□□□□□ -0.43
ZNF540-205ENST00000587220 CHMP4BP1P59074 171 aa12.39□□□□□ -0.43
ZNF540-205ENST00000587220 TRAF1Q13077 416 aa12.39□□□□□ -0.43
ZNF540-205ENST00000587220 STXBP2Q15833 593 aa12.39□□□□□ -0.43
ZNF540-205ENST00000587220 FAM47CQ5HY64 1035 aa12.39□□□□□ -0.43
ZNF540-205ENST00000587220 TMEM67Q5HYA8 995 aa12.39□□□□□ -0.43
ZNF540-205ENST00000587220 PSRC1Q6PGN9 363 aaPredicted RBP12.39□□□□□ -0.43
ZNF540-205ENST00000587220 SEPT14Q6ZU15 432 aa12.39□□□□□ -0.43
ZNF540-205ENST00000587220 CHST3Q7LGC8 479 aa12.39□□□□□ -0.43
ZNF540-205ENST00000587220 CATIPQ7Z7H3 387 aa12.39□□□□□ -0.43
ZNF540-205ENST00000587220 HOMER1Q86YM7 354 aa12.39□□□□□ -0.43
ZNF540-205ENST00000587220 SLC43A3Q8NBI5 491 aa12.39□□□□□ -0.43
ZNF540-205ENST00000587220 SYTL5Q8TDW5 730 aaPredicted RBP12.39□□□□□ -0.43
ZNF540-205ENST00000587220 TBC1D5Q92609 795 aa12.39□□□□□ -0.43
ZNF540-205ENST00000587220 IWS1Q96ST2 819 aa12.39□□□□□ -0.43
ZNF540-205ENST00000587220 MTG1Q9BT17 334 aaPredicted RBP12.39□□□□□ -0.43
ZNF540-205ENST00000587220 ANP32EQ9BTT0 268 aa12.39□□□□□ -0.43
ZNF540-205ENST00000587220 PCDHA1Q9Y5I3 950 aa12.39□□□□□ -0.43
ZNF540-205ENST00000587220 GRIN2DO15399 1336 aa12.38□□□□□ -0.43
ZNF540-205ENST00000587220 PALM3A6NDB9 673 aaPredicted RBP12.38□□□□□ -0.43
ZNF540-205ENST00000587220 ZBTB5O15062 677 aa12.38□□□□□ -0.43
ZNF540-205ENST00000587220 EIF2AK2P19525 551 aaKnown RBP12.38□□□□□ -0.43
ZNF540-205ENST00000587220 PURAQ00577 322 aaKnown RBP12.38□□□□□ -0.43
ZNF540-205ENST00000587220 GRM4Q14833 912 aa12.38□□□□□ -0.43
ZNF540-205ENST00000587220 TAAR1Q96RJ0 339 aa12.38□□□□□ -0.43
ZNF540-205ENST00000587220 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.38□□□□□ -0.43
ZNF540-205ENST00000587220 ALDH8A1Q9H2A2 487 aaPredicted RBP12.38□□□□□ -0.43
ZNF540-205ENST00000587220 MTIF3Q9H2K0 278 aaKnown RBP12.38□□□□□ -0.43
ZNF540-205ENST00000587220 MAD2L2Q9UI95 211 aa12.38□□□□□ -0.43
ZNF540-205ENST00000587220 RBM8AQ9Y5S9 174 aaKnown RBP12.38□□□□□ -0.43
ZNF540-205ENST00000587220 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.37□□□□□ -0.43
ZNF540-205ENST00000587220 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.37□□□□□ -0.43
ZNF540-205ENST00000587220 A6NJR5 290 aa12.37□□□□□ -0.43
ZNF540-205ENST00000587220 SUPT20HL2P0C7V6 817 aa12.37□□□□□ -0.43
ZNF540-205ENST00000587220 ACRP10323 421 aa12.37□□□□□ -0.43
ZNF540-205ENST00000587220 CCL23P55773 120 aa12.37□□□□□ -0.43
ZNF540-205ENST00000587220 CASC1Q6TDU7 716 aa12.37□□□□□ -0.43
ZNF540-205ENST00000587220 COPS5Q92905 334 aa12.37□□□□□ -0.43
ZNF540-205ENST00000587220 MAP4K1Q92918 833 aa12.37□□□□□ -0.43
ZNF540-205ENST00000587220 GUCD1Q96NT3 240 aa12.37□□□□□ -0.43
ZNF540-205ENST00000587220 IL23AQ9NPF7 189 aa12.37□□□□□ -0.43
ZNF540-205ENST00000587220 COL20A1Q9P218 1284 aa12.37□□□□□ -0.43
ZNF540-205ENST00000587220 NOD1Q9Y239 953 aa12.37□□□□□ -0.43
ZNF540-205ENST00000587220 A0A0C4DFX4 3053 aa12.37□□□□□ -0.43
ZNF540-205ENST00000587220 EIF3JO75822 258 aaKnown RBP12.36□□□□□ -0.43
ZNF540-205ENST00000587220 ARIH2O95376 493 aa12.36□□□□□ -0.43
ZNF540-205ENST00000587220 GH1P01241 217 aa12.36□□□□□ -0.43
ZNF540-205ENST00000587220 MYCLP12524 364 aaPredicted RBP12.36□□□□□ -0.43
ZNF540-205ENST00000587220 HSD17B4P51659 736 aa12.36□□□□□ -0.43
ZNF540-205ENST00000587220 LY6KQ17RY6 165 aa12.36□□□□□ -0.43
ZNF540-205ENST00000587220 TMEM240Q5SV17 173 aa12.36□□□□□ -0.43
ZNF540-205ENST00000587220 NFXL1Q6ZNB6 911 aa12.36□□□□□ -0.43
ZNF540-205ENST00000587220 STOX1Q6ZVD7 989 aa12.36□□□□□ -0.43
ZNF540-205ENST00000587220 ZNF365Q70YC5 407 aa12.36□□□□□ -0.43
ZNF540-205ENST00000587220 CTCFLQ8NI51 663 aaPredicted RBP12.36□□□□□ -0.43
ZNF540-205ENST00000587220 PIGSQ96S52 555 aa12.36□□□□□ -0.43
ZNF540-205ENST00000587220 NOC4LQ9BVI4 516 aaKnown RBP12.36□□□□□ -0.43
ZNF540-205ENST00000587220 SEMA6BQ9H3T3 888 aa12.36□□□□□ -0.43
ZNF540-205ENST00000587220 ANO2Q9NQ90 1003 aa12.36□□□□□ -0.43
ZNF540-205ENST00000587220 PXMP2Q9NR77 195 aa12.36□□□□□ -0.43
ZNF540-205ENST00000587220 TRMT13Q9NUP7 481 aaKnown RBP12.36□□□□□ -0.43
ZNF540-205ENST00000587220 MAP3K20Q9NYL2 800 aaKnown RBP12.36□□□□□ -0.43
ZNF540-205ENST00000587220 RBM19Q9Y4C8 960 aaKnown RBP12.36□□□□□ -0.43
ZNF540-205ENST00000587220 MRVI1Q9Y6F6 885 aa12.36□□□□□ -0.43
ZNF540-205ENST00000587220 TAF6LQ9Y6J9 622 aa12.36□□□□□ -0.43
ZNF540-205ENST00000587220 KIAA1217Q5T5P2 1943 aa12.36□□□□□ -0.43
ZNF540-205ENST00000587220 UMODL1Q5DID0 1318 aa12.36□□□□□ -0.43
ZNF540-205ENST00000587220 CDH23Q9H251 3354 aa12.35□□□□□ -0.43
ZNF540-205ENST00000587220 TMEM265A0A087WTH1 108 aa12.35□□□□□ -0.43
ZNF540-205ENST00000587220 GCOM1H8Y6P7 765 aaPredicted RBP12.35□□□□□ -0.43
ZNF540-205ENST00000587220 PPP1R11O60927 126 aaPredicted RBP12.35□□□□□ -0.43
ZNF540-205ENST00000587220 FGBP02675 491 aa12.35□□□□□ -0.43
ZNF540-205ENST00000587220 NR3C2P08235 984 aa12.35□□□□□ -0.43
ZNF540-205ENST00000587220 POLR2MP0CAP2 368 aa12.35□□□□□ -0.43
ZNF540-205ENST00000587220 CYP2C9P11712 490 aa12.35□□□□□ -0.43
ZNF540-205ENST00000587220 DNAJB2P25686 324 aa12.35□□□□□ -0.43
ZNF540-205ENST00000587220 HOXA13P31271 388 aaPredicted RBP12.35□□□□□ -0.43
ZNF540-205ENST00000587220 KIF5BP33176 963 aa12.35□□□□□ -0.43
ZNF540-205ENST00000587220 MCM5P33992 734 aa12.35□□□□□ -0.43
ZNF540-205ENST00000587220 TROAPQ12815 778 aa12.35□□□□□ -0.43
ZNF540-205ENST00000587220 NBPF20Q3BBV1 942 aa12.35□□□□□ -0.43
ZNF540-205ENST00000587220 NFRKBQ6P4R8 1299 aa12.35□□□□□ -0.43
ZNF540-205ENST00000587220 CCDC62Q6P9F0 684 aa12.35□□□□□ -0.43
ZNF540-205ENST00000587220 C16orf59Q7L2K0 433 aa12.35□□□□□ -0.43
ZNF540-205ENST00000587220 RPUSD2Q8IZ73 545 aaKnown RBP12.35□□□□□ -0.43
ZNF540-205ENST00000587220 AFG1LQ8WV93 481 aa12.35□□□□□ -0.43
ZNF540-205ENST00000587220 PIBF1Q8WXW3 757 aa12.35□□□□□ -0.43
ZNF540-205ENST00000587220 TIFAQ96CG3 184 aa12.35□□□□□ -0.43
ZNF540-205ENST00000587220 MTMR8Q96EF0 704 aa12.35□□□□□ -0.43
ZNF540-205ENST00000587220 CDX2Q99626 313 aaPredicted RBP12.35□□□□□ -0.43
ZNF540-205ENST00000587220 SENP2Q9HC62 589 aa12.35□□□□□ -0.43
ZNF540-205ENST00000587220 UNC80Q8N2C7 3258 aa12.35□□□□□ -0.43
ZNF540-205ENST00000587220 EYSQ5T1H1 3165 aa12.35□□□□□ -0.43
ZNF540-205ENST00000587220 PNMA6FA0A0J9YX94 578 aa12.34□□□□□ -0.43
ZNF540-205ENST00000587220 CCDC69A6NI79 296 aa12.34□□□□□ -0.43
ZNF540-205ENST00000587220 OPLAHO14841 1288 aa12.34□□□□□ -0.43
ZNF540-205ENST00000587220 PRC1O43663 620 aa12.34□□□□□ -0.43
ZNF540-205ENST00000587220 MMP3P08254 477 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms