RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 KIAA1683Q9H0B3 1180 aa16.51■□□□□ 0.23
MKS1-211ENST00000581761 FBXO28Q9NVF7 368 aa16.51■□□□□ 0.23
MKS1-211ENST00000581761 ZNF112Q9UJU3 913 aa16.51■□□□□ 0.23
MKS1-211ENST00000581761 DOCK1Q14185 1865 aa16.5■□□□□ 0.23
MKS1-211ENST00000581761 SPDYE3A6NKU9 549 aa16.5■□□□□ 0.23
MKS1-211ENST00000581761 MARCH6O60337 910 aa16.5■□□□□ 0.23
MKS1-211ENST00000581761 CASP1P29466 404 aa16.5■□□□□ 0.23
MKS1-211ENST00000581761 FXR2P51116 673 aaKnown RBP eCLIP16.5■□□□□ 0.23
MKS1-211ENST00000581761 USP11P51784 963 aa16.5■□□□□ 0.23
MKS1-211ENST00000581761 SARM1Q6SZW1 724 aa16.5■□□□□ 0.23
MKS1-211ENST00000581761 STAMQ92783 540 aa16.5■□□□□ 0.23
MKS1-211ENST00000581761 WRNIP1Q96S55 665 aa16.5■□□□□ 0.23
MKS1-211ENST00000581761 SLF1Q9BQI6 1058 aa16.5■□□□□ 0.23
MKS1-211ENST00000581761 AS3MTQ9HBK9 375 aa16.5■□□□□ 0.23
MKS1-211ENST00000581761 PICK1Q9NRD5 415 aa16.5■□□□□ 0.23
MKS1-211ENST00000581761 MRPL11Q9Y3B7 192 aaKnown RBP16.5■□□□□ 0.23
MKS1-211ENST00000581761 ABCB11O95342 1321 aa16.49■□□□□ 0.23
MKS1-211ENST00000581761 IKBKBO14920 756 aa16.49■□□□□ 0.23
MKS1-211ENST00000581761 AOC2O75106 756 aa16.49■□□□□ 0.23
MKS1-211ENST00000581761 USP2O75604 605 aaPredicted RBP16.49■□□□□ 0.23
MKS1-211ENST00000581761 USP14P54578 494 aa16.49■□□□□ 0.23
MKS1-211ENST00000581761 FKBP1BP68106 108 aa16.49■□□□□ 0.23
MKS1-211ENST00000581761 MAP2K1Q02750 393 aaPredicted RBP16.49■□□□□ 0.23
MKS1-211ENST00000581761 SUPT20HL1Q3ZLR7 823 aa16.49■□□□□ 0.23
MKS1-211ENST00000581761 PLA2G4DQ86XP0 818 aa16.49■□□□□ 0.23
MKS1-211ENST00000581761 IGSF22Q8N9C0 903 aa16.49■□□□□ 0.23
MKS1-211ENST00000581761 MLKLQ8NB16 471 aa16.49■□□□□ 0.23
MKS1-211ENST00000581761 SPATA20Q8TB22 786 aa16.49■□□□□ 0.23
MKS1-211ENST00000581761 HHIPL1Q96JK4 782 aa16.49■□□□□ 0.23
MKS1-211ENST00000581761 PLIN2Q99541 437 aa16.49■□□□□ 0.23
MKS1-211ENST00000581761 RAB34Q9BZG1 259 aa16.49■□□□□ 0.23
MKS1-211ENST00000581761 BLZF1Q9H2G9 400 aa16.49■□□□□ 0.23
MKS1-211ENST00000581761 WBP1LQ9NX94 342 aa16.49■□□□□ 0.23
MKS1-211ENST00000581761 LRWD1Q9UFC0 647 aa16.49■□□□□ 0.23
MKS1-211ENST00000581761 MYH7BA7E2Y1 1941 aa16.49■□□□□ 0.23
MKS1-211ENST00000581761 FAM155AB1AL88 458 aaPredicted RBP16.48■□□□□ 0.23
MKS1-211ENST00000581761 OPLAHO14841 1288 aa16.48■□□□□ 0.23
MKS1-211ENST00000581761 BMP6P22004 513 aa16.48■□□□□ 0.23
MKS1-211ENST00000581761 HOXA13P31271 388 aaPredicted RBP16.48■□□□□ 0.23
MKS1-211ENST00000581761 NF2P35240 595 aa16.48■□□□□ 0.23
MKS1-211ENST00000581761 ARHGAP4P98171 946 aa16.48■□□□□ 0.23
MKS1-211ENST00000581761 MYL5Q02045 173 aa16.48■□□□□ 0.23
MKS1-211ENST00000581761 MTMR2Q13614 643 aa16.48■□□□□ 0.23
MKS1-211ENST00000581761 LDLRAD1Q5T700 205 aa16.48■□□□□ 0.23
MKS1-211ENST00000581761 MOXD1Q6UVY6 613 aa16.48■□□□□ 0.23
MKS1-211ENST00000581761 TEX2Q8IWB9 1127 aa16.48■□□□□ 0.23
MKS1-211ENST00000581761 CALML4Q96GE6 196 aa16.48■□□□□ 0.23
MKS1-211ENST00000581761 P2RX7Q99572 595 aaKnown RBP16.48■□□□□ 0.23
MKS1-211ENST00000581761 WDR18Q9BV38 432 aa16.48■□□□□ 0.23
MKS1-211ENST00000581761 CUEDC2Q9H467 287 aa16.48■□□□□ 0.23
MKS1-211ENST00000581761 MAGEF1Q9HAY2 307 aa16.48■□□□□ 0.23
MKS1-211ENST00000581761 PAPPA2Q9BXP8 1791 aa16.48■□□□□ 0.23
MKS1-211ENST00000581761 CYP3A7-CYP3A51PA0A087WV96 503 aa16.47■□□□□ 0.23
MKS1-211ENST00000581761 GOLGA6L6A8MZA4 724 aa16.47■□□□□ 0.23
MKS1-211ENST00000581761 ESPNB1AK53 854 aa16.47■□□□□ 0.23
MKS1-211ENST00000581761 GCOM1H8Y6P7 765 aaPredicted RBP16.47■□□□□ 0.23
MKS1-211ENST00000581761 PIK3CDO00329 1044 aa16.47■□□□□ 0.23
MKS1-211ENST00000581761 POLR2MP0CAP2 368 aa16.47■□□□□ 0.23
MKS1-211ENST00000581761 PLCG1P19174 1290 aa16.47■□□□□ 0.23
MKS1-211ENST00000581761 CYP3A7P24462 503 aa16.47■□□□□ 0.23
MKS1-211ENST00000581761 SREBF1P36956 1147 aa16.47■□□□□ 0.23
MKS1-211ENST00000581761 CUL4BQ13620 913 aa16.47■□□□□ 0.23
MKS1-211ENST00000581761 TTLL12Q14166 644 aaPredicted RBP16.47■□□□□ 0.23
MKS1-211ENST00000581761 NCAPHQ15003 741 aa16.47■□□□□ 0.23
MKS1-211ENST00000581761 NAALADL2Q58DX5 795 aa16.47■□□□□ 0.23
MKS1-211ENST00000581761 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.47■□□□□ 0.23
MKS1-211ENST00000581761 DRC7Q8IY82 874 aa16.47■□□□□ 0.23
MKS1-211ENST00000581761 FAM43AQ8N2R8 423 aa16.47■□□□□ 0.23
MKS1-211ENST00000581761 SPC24Q8NBT2 197 aa16.47■□□□□ 0.23
MKS1-211ENST00000581761 ZKSCAN4Q969J2 545 aaPredicted RBP16.47■□□□□ 0.23
MKS1-211ENST00000581761 MBOAT7Q96N66 472 aa16.47■□□□□ 0.23
MKS1-211ENST00000581761 GSDMAQ96QA5 445 aa16.47■□□□□ 0.23
MKS1-211ENST00000581761 ZIC5Q96T25 663 aa16.47■□□□□ 0.23
MKS1-211ENST00000581761 MTRQ99707 1265 aa16.47■□□□□ 0.23
MKS1-211ENST00000581761 TANGO6Q9C0B7 1094 aa16.47■□□□□ 0.23
MKS1-211ENST00000581761 EMILIN3Q9NT22 766 aa16.47■□□□□ 0.23
MKS1-211ENST00000581761 CFBP00751 764 aa16.46■□□□□ 0.23
MKS1-211ENST00000581761 ICAM1P05362 532 aa16.46■□□□□ 0.23
MKS1-211ENST00000581761 PTPRAP18433 802 aa16.46■□□□□ 0.23
MKS1-211ENST00000581761 CDC25BP30305 580 aa16.46■□□□□ 0.23
MKS1-211ENST00000581761 MAP2K2P36507 400 aa16.46■□□□□ 0.23
MKS1-211ENST00000581761 CTCFP49711 727 aaPredicted RBP16.46■□□□□ 0.23
MKS1-211ENST00000581761 SPP2Q13103 211 aa16.46■□□□□ 0.23
MKS1-211ENST00000581761 DGKZQ13574 1117 aa16.46■□□□□ 0.23
MKS1-211ENST00000581761 PDIA5Q14554 519 aa16.46■□□□□ 0.23
MKS1-211ENST00000581761 RGMBQ6NW40 437 aa16.46■□□□□ 0.23
MKS1-211ENST00000581761 ZSCAN30Q86W11 494 aa16.46■□□□□ 0.23
MKS1-211ENST00000581761 FCHSD1Q86WN1 690 aa16.46■□□□□ 0.23
MKS1-211ENST00000581761 PRPF38AQ8NAV1 312 aaKnown RBP16.46■□□□□ 0.23
MKS1-211ENST00000581761 ZNF280CQ8ND82 737 aa16.46■□□□□ 0.23
MKS1-211ENST00000581761 HAS1Q92839 578 aa16.46■□□□□ 0.23
MKS1-211ENST00000581761 CDK5RAP3Q96JB5 506 aa16.46■□□□□ 0.23
MKS1-211ENST00000581761 MMTAG2Q9BU76 263 aaKnown RBP16.46■□□□□ 0.23
MKS1-211ENST00000581761 RPAP3Q9H6T3 665 aaPredicted RBP16.46■□□□□ 0.23
MKS1-211ENST00000581761 TTC12Q9H892 705 aaPredicted RBP16.46■□□□□ 0.23
MKS1-211ENST00000581761 EHMT1Q9H9B1 1298 aa16.46■□□□□ 0.23
MKS1-211ENST00000581761 RMND1Q9NWS8 449 aa16.46■□□□□ 0.23
MKS1-211ENST00000581761 CCPG1Q9ULG6 757 aa16.46■□□□□ 0.23
MKS1-211ENST00000581761 CTDP1Q9Y5B0 961 aaPredicted RBP16.46■□□□□ 0.23
MKS1-211ENST00000581761 POTEMA6NI47 508 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms