RNA–Protein interactions for RNA: ENST00000578299.1

PTP4A1-204, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2 BASIC

Gene PTP4A1, Length 135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-204ENST00000578299 KIR3DS1Q14943 382 aa3.28□□□□□ -1.88
PTP4A1-204ENST00000578299 TCEA2Q15560 299 aa3.28□□□□□ -1.88
PTP4A1-204ENST00000578299 KIZQ2M2Z5 673 aa3.28□□□□□ -1.88
PTP4A1-204ENST00000578299 TRIM61Q5EBN2 209 aa3.28□□□□□ -1.88
PTP4A1-204ENST00000578299 BICRALQ6AI39 1079 aa3.28□□□□□ -1.88
PTP4A1-204ENST00000578299 MCTP1Q6DN14 999 aa3.28□□□□□ -1.88
PTP4A1-204ENST00000578299 SDE2Q6IQ49 451 aa3.28□□□□□ -1.88
PTP4A1-204ENST00000578299 KCNT2Q6UVM3 1135 aa3.28□□□□□ -1.88
PTP4A1-204ENST00000578299 MPZL3Q6UWV2 235 aa3.28□□□□□ -1.88
PTP4A1-204ENST00000578299 C16orf86Q6ZW13 317 aa3.28□□□□□ -1.88
PTP4A1-204ENST00000578299 IFNL3Q8IZI9 196 aa3.28□□□□□ -1.88
PTP4A1-204ENST00000578299 Q8N1Y9 231 aa3.28□□□□□ -1.88
PTP4A1-204ENST00000578299 USP33Q8TEY7 942 aa3.28□□□□□ -1.88
PTP4A1-204ENST00000578299 DPF3Q92784 378 aa3.28□□□□□ -1.88
PTP4A1-204ENST00000578299 TMEM169Q96HH4 297 aa3.28□□□□□ -1.88
PTP4A1-204ENST00000578299 MRPL4Q9BYD3 311 aaKnown RBP3.28□□□□□ -1.88
PTP4A1-204ENST00000578299 NCOA5Q9HCD5 579 aaKnown RBP3.28□□□□□ -1.88
PTP4A1-204ENST00000578299 TNFRSF12AQ9NP84 129 aa3.28□□□□□ -1.88
PTP4A1-204ENST00000578299 FANCLQ9NW38 375 aa3.28□□□□□ -1.88
PTP4A1-204ENST00000578299 BTG4Q9NY30 223 aa3.28□□□□□ -1.88
PTP4A1-204ENST00000578299 MARCH2Q9P0N8 246 aa3.28□□□□□ -1.88
PTP4A1-204ENST00000578299 SFMBT1Q9UHJ3 866 aa3.28□□□□□ -1.88
PTP4A1-204ENST00000578299 RWDD3Q9Y3V2 267 aa3.28□□□□□ -1.88
PTP4A1-204ENST00000578299 PCDHA2Q9Y5H9 948 aa3.28□□□□□ -1.88
PTP4A1-204ENST00000578299 LOC100996750A0A140TA64 210 aa3.27□□□□□ -1.89
PTP4A1-204ENST00000578299 OR14I1A6ND48 311 aa3.27□□□□□ -1.89
PTP4A1-204ENST00000578299 ZNF503-AS2A6NEH8 195 aa3.27□□□□□ -1.89
PTP4A1-204ENST00000578299 C22orf46C9J442 243 aa3.27□□□□□ -1.89
PTP4A1-204ENST00000578299 HRKO00198 91 aa3.27□□□□□ -1.89
PTP4A1-204ENST00000578299 ABLIM1O14639 778 aa3.27□□□□□ -1.89
PTP4A1-204ENST00000578299 SRGAP3O43295 1099 aa3.27□□□□□ -1.89
PTP4A1-204ENST00000578299 KCNQ2O43526 872 aa3.27□□□□□ -1.89
PTP4A1-204ENST00000578299 MSCO60682 206 aa3.27□□□□□ -1.89
PTP4A1-204ENST00000578299 ASMTLO95671 621 aa3.27□□□□□ -1.89
PTP4A1-204ENST00000578299 FUCA1P04066 466 aa3.27□□□□□ -1.89
PTP4A1-204ENST00000578299 CYBBP04839 570 aa3.27□□□□□ -1.89
PTP4A1-204ENST00000578299 APPP05067 770 aa3.27□□□□□ -1.89
PTP4A1-204ENST00000578299 MPOP05164 745 aa3.27□□□□□ -1.89
PTP4A1-204ENST00000578299 GLI4P10075 376 aa3.27□□□□□ -1.89
PTP4A1-204ENST00000578299 TACR1P25103 407 aa3.27□□□□□ -1.89
PTP4A1-204ENST00000578299 PDE6BP35913 854 aa3.27□□□□□ -1.89
PTP4A1-204ENST00000578299 GALK1P51570 392 aa3.27□□□□□ -1.89
PTP4A1-204ENST00000578299 CBX2Q14781 532 aaPredicted RBP3.27□□□□□ -1.89
PTP4A1-204ENST00000578299 NR1I3Q14994 352 aa3.27□□□□□ -1.89
PTP4A1-204ENST00000578299 FNDC3BQ53EP0 1204 aaKnown RBP3.27□□□□□ -1.89
PTP4A1-204ENST00000578299 ADGRF1Q5T601 910 aa3.27□□□□□ -1.89
PTP4A1-204ENST00000578299 MROH9Q5TGP6 573 aa3.27□□□□□ -1.89
PTP4A1-204ENST00000578299 OLFML2BQ68BL8 750 aa3.27□□□□□ -1.89
PTP4A1-204ENST00000578299 PAQR3Q6TCH7 311 aa3.27□□□□□ -1.89
PTP4A1-204ENST00000578299 LBX2Q6XYB7 198 aa3.27□□□□□ -1.89
PTP4A1-204ENST00000578299 CEP68Q76N32 757 aa3.27□□□□□ -1.89
PTP4A1-204ENST00000578299 RIOX2Q8IUF8 465 aa3.27□□□□□ -1.89
PTP4A1-204ENST00000578299 NLGN1Q8N2Q7 840 aa3.27□□□□□ -1.89
PTP4A1-204ENST00000578299 NETO2Q8NC67 525 aa3.27□□□□□ -1.89
PTP4A1-204ENST00000578299 GSTCDQ8NEC7 633 aa3.27□□□□□ -1.89
PTP4A1-204ENST00000578299 PLEKHO2Q8TD55 490 aa3.27□□□□□ -1.89
PTP4A1-204ENST00000578299 TRMT2BQ96GJ1 504 aaKnown RBP3.27□□□□□ -1.89
PTP4A1-204ENST00000578299 LIN37Q96GY3 246 aaPredicted RBP3.27□□□□□ -1.89
PTP4A1-204ENST00000578299 CHAMP1Q96JM3 812 aa3.27□□□□□ -1.89
PTP4A1-204ENST00000578299 ALG1Q9BT22 464 aa3.27□□□□□ -1.89
PTP4A1-204ENST00000578299 KRTAP4-6Q9BYQ5 205 aa3.27□□□□□ -1.89
PTP4A1-204ENST00000578299 CLDND1Q9NY35 253 aa3.27□□□□□ -1.89
PTP4A1-204ENST00000578299 NDOR1Q9UHB4 597 aa3.27□□□□□ -1.89
PTP4A1-204ENST00000578299 COA3Q9Y2R0 106 aaPredicted RBP3.27□□□□□ -1.89
PTP4A1-204ENST00000578299 TRAF6Q9Y4K3 522 aa3.27□□□□□ -1.89
PTP4A1-204ENST00000578299 X6R8D5 127 aa3.27□□□□□ -1.89
PTP4A1-204ENST00000578299 ASXL2Q76L83 1435 aa3.27□□□□□ -1.89
PTP4A1-204ENST00000578299 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.26□□□□□ -1.89
PTP4A1-204ENST00000578299 FAM47E-STBD1D6RA91 191 aa3.26□□□□□ -1.89
PTP4A1-204ENST00000578299 PPP1R12AO14974 1030 aaPredicted RBP3.26□□□□□ -1.89
PTP4A1-204ENST00000578299 RFPL3O75679 317 aa3.26□□□□□ -1.89
PTP4A1-204ENST00000578299 NTRK1P04629 796 aa3.26□□□□□ -1.89
PTP4A1-204ENST00000578299 DBHP09172 617 aa3.26□□□□□ -1.89
PTP4A1-204ENST00000578299 FPR2P25090 351 aa3.26□□□□□ -1.89
PTP4A1-204ENST00000578299 GRK2P25098 689 aa3.26□□□□□ -1.89
PTP4A1-204ENST00000578299 HSD3B2P26439 372 aa3.26□□□□□ -1.89
PTP4A1-204ENST00000578299 GRK3P35626 688 aa3.26□□□□□ -1.89
PTP4A1-204ENST00000578299 GUCY1A3Q02108 690 aa3.26□□□□□ -1.89
PTP4A1-204ENST00000578299 PAK1Q13153 545 aa3.26□□□□□ -1.89
PTP4A1-204ENST00000578299 TAF7LQ5H9L4 462 aa3.26□□□□□ -1.89
PTP4A1-204ENST00000578299 WWC2Q6AWC2 1192 aa3.26□□□□□ -1.89
PTP4A1-204ENST00000578299 MTDHQ86UE4 582 aaKnown RBP3.26□□□□□ -1.89
PTP4A1-204ENST00000578299 NLRP10Q86W26 655 aa3.26□□□□□ -1.89
PTP4A1-204ENST00000578299 DCP2Q8IU60 420 aaKnown RBP3.26□□□□□ -1.89
PTP4A1-204ENST00000578299 TEX2Q8IWB9 1127 aa3.26□□□□□ -1.89
PTP4A1-204ENST00000578299 SLC7A14Q8TBB6 771 aa3.26□□□□□ -1.89
PTP4A1-204ENST00000578299 PEX11GQ96HA9 241 aa3.26□□□□□ -1.89
PTP4A1-204ENST00000578299 MAGEB10Q96LZ2 347 aaPredicted RBP3.26□□□□□ -1.89
PTP4A1-204ENST00000578299 FEZ1Q99689 392 aa3.26□□□□□ -1.89
PTP4A1-204ENST00000578299 CDIP1Q9H305 208 aa3.26□□□□□ -1.89
PTP4A1-204ENST00000578299 EPB41L4BQ9H329 900 aa3.26□□□□□ -1.89
PTP4A1-204ENST00000578299 EPB41L1Q9H4G0 881 aa3.26□□□□□ -1.89
PTP4A1-204ENST00000578299 ZNF552Q9H707 407 aaPredicted RBP3.26□□□□□ -1.89
PTP4A1-204ENST00000578299 SLC52A2Q9HAB3 445 aa3.26□□□□□ -1.89
PTP4A1-204ENST00000578299 FBLN5Q9UBX5 448 aa3.26□□□□□ -1.89
PTP4A1-204ENST00000578299 FBXL7Q9UJT9 491 aa3.26□□□□□ -1.89
PTP4A1-204ENST00000578299 NUDT5Q9UKK9 219 aa3.26□□□□□ -1.89
PTP4A1-204ENST00000578299 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.26□□□□□ -1.89
PTP4A1-204ENST00000578299 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.25□□□□□ -1.89
PTP4A1-204ENST00000578299 LRRC10BA6NIK2 292 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms