RNA–Protein interactions for RNA: ENST00000563976.1

CYLD-206, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 4

Gene CYLD, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-206ENST00000563976 EEF1DP3Q658K8 133 aa6.59□□□□□ -1.35
CYLD-206ENST00000563976 LARP1BQ659C4 914 aaKnown RBP6.59□□□□□ -1.35
CYLD-206ENST00000563976 C6orf15Q6UXA7 325 aaPredicted RBP6.59□□□□□ -1.35
CYLD-206ENST00000563976 LDHDQ86WU2 507 aa6.59□□□□□ -1.35
CYLD-206ENST00000563976 RCC1LQ96I51 464 aaKnown RBP6.59□□□□□ -1.35
CYLD-206ENST00000563976 SIGLEC10Q96LC7 697 aa6.59□□□□□ -1.35
CYLD-206ENST00000563976 APBA2Q99767 749 aa6.59□□□□□ -1.35
CYLD-206ENST00000563976 PDLIM7Q9NR12 457 aa6.59□□□□□ -1.35
CYLD-206ENST00000563976 RWDD3Q9Y3V2 267 aa6.59□□□□□ -1.35
CYLD-206ENST00000563976 PPRC1Q5VV67 1664 aaKnown RBP6.58□□□□□ -1.36
CYLD-206ENST00000563976 ZC3H12DA2A288 527 aaKnown RBP6.58□□□□□ -1.36
CYLD-206ENST00000563976 ETFBP38117 255 aa6.58□□□□□ -1.36
CYLD-206ENST00000563976 GRB10Q13322 594 aa6.58□□□□□ -1.36
CYLD-206ENST00000563976 ZC3H14Q6PJT7 736 aaKnown RBP6.58□□□□□ -1.36
CYLD-206ENST00000563976 AMIGO3Q86WK7 504 aa6.58□□□□□ -1.36
CYLD-206ENST00000563976 VPS37DQ86XT2 251 aa6.58□□□□□ -1.36
CYLD-206ENST00000563976 IGDCC3Q8IVU1 814 aa6.58□□□□□ -1.36
CYLD-206ENST00000563976 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.58□□□□□ -1.36
CYLD-206ENST00000563976 EPB41L4AQ9HCS5 686 aaPredicted RBP6.58□□□□□ -1.36
CYLD-206ENST00000563976 GULP1Q9UBP9 304 aa6.58□□□□□ -1.36
CYLD-206ENST00000563976 FBLN5Q9UBX5 448 aa6.58□□□□□ -1.36
CYLD-206ENST00000563976 CFAP43Q8NDM7 1665 aa6.58□□□□□ -1.36
CYLD-206ENST00000563976 CLIP1P30622 1438 aa6.58□□□□□ -1.36
CYLD-206ENST00000563976 ASXL2Q76L83 1435 aa6.58□□□□□ -1.36
CYLD-206ENST00000563976 MAP3K4Q9Y6R4 1608 aa6.58□□□□□ -1.36
CYLD-206ENST00000563976 KDM5BQ9UGL1 1544 aa6.57□□□□□ -1.36
CYLD-206ENST00000563976 RFXAPO00287 272 aa6.57□□□□□ -1.36
CYLD-206ENST00000563976 PPP1R11O60927 126 aaPredicted RBP6.57□□□□□ -1.36
CYLD-206ENST00000563976 MAPKAPK2P49137 400 aa6.57□□□□□ -1.36
CYLD-206ENST00000563976 TMEM62Q0P6H9 643 aa6.57□□□□□ -1.36
CYLD-206ENST00000563976 CBX2Q14781 532 aaPredicted RBP6.57□□□□□ -1.36
CYLD-206ENST00000563976 NR1I3Q14994 352 aa6.57□□□□□ -1.36
CYLD-206ENST00000563976 VMACQ2NL98 169 aa6.57□□□□□ -1.36
CYLD-206ENST00000563976 TMEFF1Q8IYR6 380 aa6.57□□□□□ -1.36
CYLD-206ENST00000563976 BVESQ8NE79 360 aa6.57□□□□□ -1.36
CYLD-206ENST00000563976 GPRC5CQ9NQ84 441 aa6.57□□□□□ -1.36
CYLD-206ENST00000563976 ACTR10Q9NZ32 417 aa6.57□□□□□ -1.36
CYLD-206ENST00000563976 CLEC1BQ9P126 229 aa6.57□□□□□ -1.36
CYLD-206ENST00000563976 EMC9Q9Y3B6 208 aa6.57□□□□□ -1.36
CYLD-206ENST00000563976 PCDHA5Q9Y5H7 936 aa6.57□□□□□ -1.36
CYLD-206ENST00000563976 NUP153P49790 1475 aaKnown RBP6.57□□□□□ -1.36
CYLD-206ENST00000563976 WDR7Q9Y4E6 1490 aa6.57□□□□□ -1.36
CYLD-206ENST00000563976 ABCC10Q5T3U5 1492 aa6.56□□□□□ -1.36
CYLD-206ENST00000563976 F8W031 263 aaPredicted RBP6.56□□□□□ -1.36
CYLD-206ENST00000563976 IRS4O14654 1257 aaPredicted RBP6.56□□□□□ -1.36
CYLD-206ENST00000563976 BUB1BO60566 1050 aaPredicted RBP6.56□□□□□ -1.36
CYLD-206ENST00000563976 CYBBP04839 570 aa6.56□□□□□ -1.36
CYLD-206ENST00000563976 INHBBP09529 407 aa6.56□□□□□ -1.36
CYLD-206ENST00000563976 PAMP19021 973 aa6.56□□□□□ -1.36
CYLD-206ENST00000563976 SCRN1Q12765 414 aa6.56□□□□□ -1.36
CYLD-206ENST00000563976 NCAPHQ15003 741 aa6.56□□□□□ -1.36
CYLD-206ENST00000563976 TCERG1LQ5VWI1 586 aa6.56□□□□□ -1.36
CYLD-206ENST00000563976 PAQR3Q6TCH7 311 aa6.56□□□□□ -1.36
CYLD-206ENST00000563976 MICAL1Q8TDZ2 1067 aa6.56□□□□□ -1.36
CYLD-206ENST00000563976 TINF2Q9BSI4 451 aa6.56□□□□□ -1.36
CYLD-206ENST00000563976 BCAS3Q9H6U6 928 aa6.56□□□□□ -1.36
CYLD-206ENST00000563976 DBR1Q9UK59 544 aaKnown RBP6.56□□□□□ -1.36
CYLD-206ENST00000563976 CEP162Q5TB80 1403 aa6.56□□□□□ -1.36
CYLD-206ENST00000563976 KDM6BO15054 1643 aa6.55□□□□□ -1.36
CYLD-206ENST00000563976 NPHP3-ACAD11A0A0J9YXS1 232 aa6.55□□□□□ -1.36
CYLD-206ENST00000563976 NOP56O00567 594 aaKnown RBP6.55□□□□□ -1.36
CYLD-206ENST00000563976 SRGAP3O43295 1099 aa6.55□□□□□ -1.36
CYLD-206ENST00000563976 TBX1O43435 398 aa6.55□□□□□ -1.36
CYLD-206ENST00000563976 DDAH1O94760 285 aa6.55□□□□□ -1.36
CYLD-206ENST00000563976 PLS3P13797 630 aa6.55□□□□□ -1.36
CYLD-206ENST00000563976 BMP7P18075 431 aa6.55□□□□□ -1.36
CYLD-206ENST00000563976 LIMS1P48059 325 aa6.55□□□□□ -1.36
CYLD-206ENST00000563976 CORO7P57737 925 aa6.55□□□□□ -1.36
CYLD-206ENST00000563976 PRR5P85299 388 aa6.55□□□□□ -1.36
CYLD-206ENST00000563976 GNL2Q13823 731 aaKnown RBP6.55□□□□□ -1.36
CYLD-206ENST00000563976 GTF2IRD2BQ6EKJ0 949 aa6.55□□□□□ -1.36
CYLD-206ENST00000563976 CNKSR3Q6P9H4 555 aa6.55□□□□□ -1.36
CYLD-206ENST00000563976 GTF2IRD2Q86UP8 949 aa6.55□□□□□ -1.36
CYLD-206ENST00000563976 FAM178BQ8IXR5 827 aa6.55□□□□□ -1.36
CYLD-206ENST00000563976 NLGN2Q8NFZ4 835 aa6.55□□□□□ -1.36
CYLD-206ENST00000563976 ZNF408Q9H9D4 720 aa6.55□□□□□ -1.36
CYLD-206ENST00000563976 TTC37Q6PGP7 1564 aa6.55□□□□□ -1.36
CYLD-206ENST00000563976 MYO5CQ9NQX4 1742 aa6.55□□□□□ -1.36
CYLD-206ENST00000563976 EPRSP07814 1512 aaKnown RBP6.55□□□□□ -1.36
CYLD-206ENST00000563976 KIF14Q15058 1648 aa6.54□□□□□ -1.36
CYLD-206ENST00000563976 FMN1Q68DA7 1419 aa6.54□□□□□ -1.36
CYLD-206ENST00000563976 GLI4P10075 376 aa6.54□□□□□ -1.36
CYLD-206ENST00000563976 DNAJA1P31689 397 aaKnown RBP6.54□□□□□ -1.36
CYLD-206ENST00000563976 AFF3P51826 1226 aaKnown RBP6.54□□□□□ -1.36
CYLD-206ENST00000563976 SV2CQ496J9 727 aa6.54□□□□□ -1.36
CYLD-206ENST00000563976 MBLAC2Q68D91 279 aa6.54□□□□□ -1.36
CYLD-206ENST00000563976 POMZP3Q6PJE2 187 aa6.54□□□□□ -1.36
CYLD-206ENST00000563976 FAM129CQ86XR2 697 aa6.54□□□□□ -1.36
CYLD-206ENST00000563976 TRIM59Q8IWR1 403 aa6.54□□□□□ -1.36
CYLD-206ENST00000563976 LZTR1Q8N653 840 aa6.54□□□□□ -1.36
CYLD-206ENST00000563976 COPS5Q92905 334 aa6.54□□□□□ -1.36
CYLD-206ENST00000563976 DACT3Q96B18 629 aaPredicted RBP6.54□□□□□ -1.36
CYLD-206ENST00000563976 PRKAG3Q9UGI9 489 aa6.54□□□□□ -1.36
CYLD-206ENST00000563976 GLI2P10070 1586 aa6.53□□□□□ -1.36
CYLD-206ENST00000563976 ADAMTS20P59510 1910 aa6.53□□□□□ -1.36
CYLD-206ENST00000563976 C7orf72A4D263 438 aa6.53□□□□□ -1.36
CYLD-206ENST00000563976 THBDP07204 575 aa6.53□□□□□ -1.36
CYLD-206ENST00000563976 FGRP09769 529 aa6.53□□□□□ -1.36
CYLD-206ENST00000563976 NAT2P11245 290 aa6.53□□□□□ -1.36
CYLD-206ENST00000563976 ZNF143P52747 638 aaPredicted RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms