RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 PRKG2Q13237 762 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 SCARF1Q14162 830 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 INPP5AQ14642 412 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 LBRQ14739 615 aaKnown RBP2.4□□□□□ -2.03
RTF1-207ENST00000561076 ARHGAP44Q17R89 818 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 ZNF423Q2M1K9 1284 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 SKOR2Q2VWA4 1001 aaPredicted RBP2.4□□□□□ -2.03
RTF1-207ENST00000561076 SPECC1Q5M775 1068 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 TMEM201Q5SNT2 666 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 C6orf118Q5T5N4 469 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 CFAP58Q5T655 872 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 ANKRD45Q5TZF3 282 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 RNF220Q5VTB9 566 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 TSHZ3Q63HK5 1081 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 DCAF15Q66K64 600 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 CWF19L1Q69YN2 538 aaKnown RBP2.4□□□□□ -2.03
RTF1-207ENST00000561076 LRFN4Q6PJG9 635 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 POTEHQ6S545 545 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 LDHAL6AQ6ZMR3 332 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 RAB44Q7Z6P3 723 aaPredicted RBP2.4□□□□□ -2.03
RTF1-207ENST00000561076 DAAM2Q86T65 1068 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 C12orf40Q86WS4 652 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 HID1Q8IV36 788 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 TRIM59Q8IWR1 403 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 COLGALT2Q8IYK4 626 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 CYP4X1Q8N118 509 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 OR8H2Q8N162 312 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 LINC00528Q8N1L1 170 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 SDR16C5Q8N3Y7 309 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 NKAPQ8N5F7 415 aaKnown RBP2.4□□□□□ -2.03
RTF1-207ENST00000561076 MEIOBQ8N635 442 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 KCT2Q8NC54 265 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 CHST14Q8NCH0 376 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 ZBTB34Q8NCN2 500 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 SNIP1Q8TAD8 396 aaKnown RBP2.4□□□□□ -2.03
RTF1-207ENST00000561076 DEPTORQ8TB45 409 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 ZNF507Q8TCN5 953 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 STK35Q8TDR2 534 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 PPIL4Q8WUA2 492 aaKnown RBP eCLIP2.4□□□□□ -2.03
RTF1-207ENST00000561076 DIO2Q92813 273 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 KLRG1Q96E93 195 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 TEKT5Q96M29 485 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 TTC14Q96N46 770 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 HS3ST6Q96QI5 342 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 POP1Q99575 1024 aaKnown RBP2.4□□□□□ -2.03
RTF1-207ENST00000561076 ISCA1Q9BUE6 129 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 AP1M1Q9BXS5 423 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 LRRC27Q9C0I9 530 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 KLHL25Q9H0H3 589 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 ASCC2Q9H1I8 757 aaPredicted RBP2.4□□□□□ -2.03
RTF1-207ENST00000561076 RIC8AQ9NPQ8 531 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 CRTAC1Q9NQ79 661 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 CYP26B1Q9NR63 512 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 RASSF1Q9NS23 344 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 KRT82Q9NSB4 513 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 SPTLC3Q9NUV7 552 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 DNAJC28Q9NX36 388 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 RNF112Q9ULX5 631 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 PHF24Q9UPV7 400 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 TRAF6Q9Y4K3 522 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 PCDHB12Q9Y5F1 795 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 PCDHGC4Q9Y5F7 938 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 PCDHGB6Q9Y5F9 930 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 LRRFIP2Q9Y608 721 aaKnown RBP2.4□□□□□ -2.03
RTF1-207ENST00000561076 RPGRIP1LQ68CZ1 1315 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 CAPN8A6NHC0 703 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 RRN3P2A6NIE6 340 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 TSPY2A6NKD2 308 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 FIGNL2A6NMB9 653 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 TTLL8A6PVC2 850 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 PRSS47A8MTI9 375 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 WDR64B1ANS9 1081 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 B4DLN1 442 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 RASA4BC9J798 803 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 hCG_1984214I3L0E3 225 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 K7ESF4 209 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 NFKBIEO00221 500 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 GFRA2O00451 464 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 RGS13O14921 159 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 MEFVO15553 781 aaPredicted RBP2.39□□□□□ -2.03
RTF1-207ENST00000561076 RASA4O43374 803 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 MYO1BO43795 1136 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 MAFKO60675 156 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 SKAP2O75563 359 aaPredicted RBP2.39□□□□□ -2.03
RTF1-207ENST00000561076 GLRX3O76003 335 aaKnown RBP2.39□□□□□ -2.03
RTF1-207ENST00000561076 PYGLP06737 847 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 C6orf222P0C671 652 aaPredicted RBP2.39□□□□□ -2.03
RTF1-207ENST00000561076 TSPY3P0CV98 308 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 TSPY8P0CW00 308 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 ESRRAP11474 423 aaPredicted RBP2.39□□□□□ -2.03
RTF1-207ENST00000561076 HOXD8P13378 290 aaPredicted RBP2.39□□□□□ -2.03
RTF1-207ENST00000561076 TIMP2P16035 220 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 CD247P20963 164 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 PEX2P28328 305 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 GRNP28799 593 aaKnown RBP2.39□□□□□ -2.03
RTF1-207ENST00000561076 GRIA2P42262 883 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 CDK8P49336 464 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 GPR85P60893 370 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 TSPY1Q01534 308 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 KIF23Q02241 960 aaPredicted RBP2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms