RNA–Protein interactions for RNA: ENST00000556956.1

SLIRP-208, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 450 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-208ENST00000556956 CLEC17AQ6ZS10 378 aa3.51□□□□□ -1.85
SLIRP-208ENST00000556956 FTSJ3Q8IY81 847 aaKnown RBP3.51□□□□□ -1.85
SLIRP-208ENST00000556956 LILRA2Q8N149 483 aa3.51□□□□□ -1.85
SLIRP-208ENST00000556956 DTWD2Q8NBA8 298 aa3.51□□□□□ -1.85
SLIRP-208ENST00000556956 TP53I13Q8NBR0 393 aaPredicted RBP3.51□□□□□ -1.85
SLIRP-208ENST00000556956 PPP1R13LQ8WUF5 828 aa3.51□□□□□ -1.85
SLIRP-208ENST00000556956 NKD1Q969G9 470 aa3.51□□□□□ -1.85
SLIRP-208ENST00000556956 VWCEQ96DN2 955 aa3.51□□□□□ -1.85
SLIRP-208ENST00000556956 DHRS1Q96LJ7 313 aa3.51□□□□□ -1.85
SLIRP-208ENST00000556956 CFAP53Q96M91 514 aa3.51□□□□□ -1.85
SLIRP-208ENST00000556956 NT5C1AQ9BXI3 368 aa3.51□□□□□ -1.85
SLIRP-208ENST00000556956 C19orf44Q9H6X5 657 aa3.51□□□□□ -1.85
SLIRP-208ENST00000556956 EHMT1Q9H9B1 1298 aa3.51□□□□□ -1.85
SLIRP-208ENST00000556956 CWC22Q9HCG8 908 aaKnown RBP3.51□□□□□ -1.85
SLIRP-208ENST00000556956 BRMS1Q9HCU9 246 aa3.51□□□□□ -1.85
SLIRP-208ENST00000556956 METTL5Q9NRN9 209 aaKnown RBP3.51□□□□□ -1.85
SLIRP-208ENST00000556956 TMEM59LQ9UK28 342 aa3.51□□□□□ -1.85
SLIRP-208ENST00000556956 DDX19BQ9UMR2 479 aa3.51□□□□□ -1.85
SLIRP-208ENST00000556956 R3HCC1Q9Y3T6 440 aaKnown RBP3.51□□□□□ -1.85
SLIRP-208ENST00000556956 PCDHB14Q9Y5E9 798 aa3.51□□□□□ -1.85
SLIRP-208ENST00000556956 NUP153P49790 1475 aaKnown RBP3.51□□□□□ -1.85
SLIRP-208ENST00000556956 CCDC141Q6ZP82 1450 aa3.51□□□□□ -1.85
SLIRP-208ENST00000556956 ADGBQ8N7X0 1667 aa3.51□□□□□ -1.85
SLIRP-208ENST00000556956 PCSK5Q92824 1860 aa3.51□□□□□ -1.85
SLIRP-208ENST00000556956 POLR3AO14802 1390 aaPredicted RBP3.51□□□□□ -1.85
SLIRP-208ENST00000556956 KANK1Q14678 1352 aa3.51□□□□□ -1.85
SLIRP-208ENST00000556956 IBTKQ9P2D0 1353 aaPredicted RBP3.51□□□□□ -1.85
SLIRP-208ENST00000556956 CDC42BPAQ5VT25 1732 aa3.5□□□□□ -1.85
SLIRP-208ENST00000556956 ASXL1Q8IXJ9 1541 aa3.5□□□□□ -1.85
SLIRP-208ENST00000556956 E9PCH4 1651 aa3.5□□□□□ -1.85
SLIRP-208ENST00000556956 MAGI2Q86UL8 1455 aa3.5□□□□□ -1.85
SLIRP-208ENST00000556956 NLRP1Q9C000 1473 aa3.5□□□□□ -1.85
SLIRP-208ENST00000556956 FITM1A5D6W6 292 aa3.5□□□□□ -1.85
SLIRP-208ENST00000556956 TLR3O15455 904 aaKnown RBP3.5□□□□□ -1.85
SLIRP-208ENST00000556956 ZNF16P17020 682 aaPredicted RBP3.5□□□□□ -1.85
SLIRP-208ENST00000556956 ENDOUP21128 410 aaKnown RBP3.5□□□□□ -1.85
SLIRP-208ENST00000556956 GARTP22102 1010 aa3.5□□□□□ -1.85
SLIRP-208ENST00000556956 EPHB3P54753 998 aa3.5□□□□□ -1.85
SLIRP-208ENST00000556956 EGR3Q06889 387 aa3.5□□□□□ -1.85
SLIRP-208ENST00000556956 DUSP4Q13115 394 aa3.5□□□□□ -1.85
SLIRP-208ENST00000556956 SNX17Q15036 470 aa3.5□□□□□ -1.85
SLIRP-208ENST00000556956 GAB4Q2WGN9 574 aa3.5□□□□□ -1.85
SLIRP-208ENST00000556956 SEZ6Q53EL9 994 aa3.5□□□□□ -1.85
SLIRP-208ENST00000556956 ARSHQ5FYA8 562 aa3.5□□□□□ -1.85
SLIRP-208ENST00000556956 ZFYVE27Q5T4F4 411 aa3.5□□□□□ -1.85
SLIRP-208ENST00000556956 UTP14CQ5TAP6 766 aaKnown RBP3.5□□□□□ -1.85
SLIRP-208ENST00000556956 CDCP2Q5VXM1 449 aa3.5□□□□□ -1.85
SLIRP-208ENST00000556956 CPZQ66K79 652 aa3.5□□□□□ -1.85
SLIRP-208ENST00000556956 CRIP3Q6Q6R5 217 aa3.5□□□□□ -1.85
SLIRP-208ENST00000556956 SASS6Q6UVJ0 657 aa3.5□□□□□ -1.85
SLIRP-208ENST00000556956 GAS2L3Q86XJ1 694 aa3.5□□□□□ -1.85
SLIRP-208ENST00000556956 KIAA0825Q8IV33 1275 aa3.5□□□□□ -1.85
SLIRP-208ENST00000556956 PDZD8Q8NEN9 1154 aa3.5□□□□□ -1.85
SLIRP-208ENST00000556956 SPATA32Q96LK8 384 aa3.5□□□□□ -1.85
SLIRP-208ENST00000556956 Q96M66 194 aa3.5□□□□□ -1.85
SLIRP-208ENST00000556956 KIF2CQ99661 725 aa3.5□□□□□ -1.85
SLIRP-208ENST00000556956 SPON2Q9BUD6 331 aa3.5□□□□□ -1.85
SLIRP-208ENST00000556956 SLC6A17Q9H1V8 727 aa3.5□□□□□ -1.85
SLIRP-208ENST00000556956 COPRSQ9NQ92 184 aa3.5□□□□□ -1.85
SLIRP-208ENST00000556956 C11orf21Q9P2W6 132 aa3.5□□□□□ -1.85
SLIRP-208ENST00000556956 ING1Q9UK53 422 aaPredicted RBP3.5□□□□□ -1.85
SLIRP-208ENST00000556956 NOL7Q9UMY1 257 aaKnown RBP3.5□□□□□ -1.85
SLIRP-208ENST00000556956 POLR3KQ9Y2Y1 108 aaPredicted RBP3.5□□□□□ -1.85
SLIRP-208ENST00000556956 DDX49Q9Y6V7 483 aaKnown RBP3.5□□□□□ -1.85
SLIRP-208ENST00000556956 LAMC1P11047 1609 aa3.5□□□□□ -1.85
SLIRP-208ENST00000556956 PRDM15P57071 1507 aaPredicted RBP3.49□□□□□ -1.85
SLIRP-208ENST00000556956 DISP1Q96F81 1524 aa3.49□□□□□ -1.85
SLIRP-208ENST00000556956 A2MP01023 1474 aa3.49□□□□□ -1.85
SLIRP-208ENST00000556956 SCAF11Q99590 1463 aaKnown RBP3.49□□□□□ -1.85
SLIRP-208ENST00000556956 WDR7Q9Y4E6 1490 aa3.49□□□□□ -1.85
SLIRP-208ENST00000556956 EIF2AK4Q9P2K8 1649 aaKnown RBP3.49□□□□□ -1.85
SLIRP-208ENST00000556956 UQCRHLA0A096LP55 91 aa3.49□□□□□ -1.85
SLIRP-208ENST00000556956 RBM47A0AV96 593 aaKnown RBP3.49□□□□□ -1.85
SLIRP-208ENST00000556956 CLEC3AO75596 197 aa3.49□□□□□ -1.85
SLIRP-208ENST00000556956 BAG4O95429 457 aaKnown RBP3.49□□□□□ -1.85
SLIRP-208ENST00000556956 ESR1P03372 595 aa3.49□□□□□ -1.85
SLIRP-208ENST00000556956 UQCRHP07919 91 aa3.49□□□□□ -1.85
SLIRP-208ENST00000556956 ZNF20P17024 532 aa3.49□□□□□ -1.85
SLIRP-208ENST00000556956 RIPK4P57078 832 aa3.49□□□□□ -1.85
SLIRP-208ENST00000556956 RBM10P98175 930 aaKnown RBP3.49□□□□□ -1.85
SLIRP-208ENST00000556956 NUCB1Q02818 461 aa3.49□□□□□ -1.85
SLIRP-208ENST00000556956 KLF10Q13118 480 aa3.49□□□□□ -1.85
SLIRP-208ENST00000556956 NR0B2Q15466 257 aa3.49□□□□□ -1.85
SLIRP-208ENST00000556956 TIGD5Q53EQ6 642 aa3.49□□□□□ -1.85
SLIRP-208ENST00000556956 UBXN11Q5T124 520 aa3.49□□□□□ -1.85
SLIRP-208ENST00000556956 INTS3Q68E01 1043 aaKnown RBP3.49□□□□□ -1.85
SLIRP-208ENST00000556956 RNF111Q6ZNA4 994 aa3.49□□□□□ -1.85
SLIRP-208ENST00000556956 FERMT3Q86UX7 667 aa3.49□□□□□ -1.85
SLIRP-208ENST00000556956 MORC1Q86VD1 984 aa3.49□□□□□ -1.85
SLIRP-208ENST00000556956 SLITRK4Q8IW52 837 aa3.49□□□□□ -1.85
SLIRP-208ENST00000556956 TCP11L2Q8N4U5 519 aa3.49□□□□□ -1.85
SLIRP-208ENST00000556956 ZNF655Q8N720 491 aaPredicted RBP3.49□□□□□ -1.85
SLIRP-208ENST00000556956 DAGLBQ8NCG7 672 aa3.49□□□□□ -1.85
SLIRP-208ENST00000556956 FBXO27Q8NI29 283 aa3.49□□□□□ -1.85
SLIRP-208ENST00000556956 SYTL5Q8TDW5 730 aaPredicted RBP3.49□□□□□ -1.85
SLIRP-208ENST00000556956 RNF34Q969K3 372 aa3.49□□□□□ -1.85
SLIRP-208ENST00000556956 GCC1Q96CN9 775 aa3.49□□□□□ -1.85
SLIRP-208ENST00000556956 GTPBP4Q9BZE4 634 aaKnown RBP3.49□□□□□ -1.85
SLIRP-208ENST00000556956 ADAMTS10Q9H324 1103 aa3.49□□□□□ -1.85
SLIRP-208ENST00000556956 CNNM2Q9H8M5 875 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms