RNA–Protein interactions for RNA: ENST00000553866.1

CHGA-203, Transcript of chromogranin A, humanhuman

TSL 3

Gene CHGA, Length 889 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-203ENST00000553866 RMDN3Q96TC7 470 aa14.6□□□□□ -0.07
CHGA-203ENST00000553866 TSEN34Q9BSV6 310 aaKnown RBP14.6□□□□□ -0.07
CHGA-203ENST00000553866 WDR11Q9BZH6 1224 aa14.6□□□□□ -0.07
CHGA-203ENST00000553866 PXMP2Q9NR77 195 aa14.6□□□□□ -0.07
CHGA-203ENST00000553866 RBM27Q9P2N5 1060 aaKnown RBP14.6□□□□□ -0.07
CHGA-203ENST00000553866 RPS6KB1P23443 525 aa14.59□□□□□ -0.07
CHGA-203ENST00000553866 SMARCA1P28370 1054 aa14.59□□□□□ -0.07
CHGA-203ENST00000553866 CDC27P30260 824 aa14.59□□□□□ -0.07
CHGA-203ENST00000553866 GNAQP50148 359 aa14.59□□□□□ -0.07
CHGA-203ENST00000553866 DUSP28Q4G0W2 176 aa14.59□□□□□ -0.07
CHGA-203ENST00000553866 HABP4Q5JVS0 413 aaKnown RBP14.59□□□□□ -0.07
CHGA-203ENST00000553866 BLOC1S2Q6QNY1 142 aa14.59□□□□□ -0.07
CHGA-203ENST00000553866 SH3RF1Q7Z6J0 888 aa14.59□□□□□ -0.07
CHGA-203ENST00000553866 NSUN6Q8TEA1 469 aaKnown RBP14.59□□□□□ -0.07
CHGA-203ENST00000553866 BRF1Q92994 677 aa14.59□□□□□ -0.07
CHGA-203ENST00000553866 RRP36Q96EU6 259 aaKnown RBP14.59□□□□□ -0.07
CHGA-203ENST00000553866 MAF1Q9H063 256 aa14.59□□□□□ -0.07
CHGA-203ENST00000553866 KIAA1217Q5T5P2 1943 aa14.58□□□□□ -0.07
CHGA-203ENST00000553866 ZBTB43O43298 467 aa14.58□□□□□ -0.08
CHGA-203ENST00000553866 NR3C2P08235 984 aa14.58□□□□□ -0.08
CHGA-203ENST00000553866 HMGB1P09429 215 aaKnown RBP14.58□□□□□ -0.08
CHGA-203ENST00000553866 CASTP20810 708 aaKnown RBP14.58□□□□□ -0.08
CHGA-203ENST00000553866 MAGEA10P43363 369 aaPredicted RBP14.58□□□□□ -0.08
CHGA-203ENST00000553866 TLE2Q04725 743 aa14.58□□□□□ -0.08
CHGA-203ENST00000553866 C1orf53Q5VUE5 145 aa14.58□□□□□ -0.08
CHGA-203ENST00000553866 ARHGEF16Q5VV41 709 aa14.58□□□□□ -0.08
CHGA-203ENST00000553866 FCHSD1Q86WN1 690 aa14.58□□□□□ -0.08
CHGA-203ENST00000553866 GDF15Q99988 308 aa14.58□□□□□ -0.08
CHGA-203ENST00000553866 LZTS2Q9BRK4 669 aa14.58□□□□□ -0.08
CHGA-203ENST00000553866 CNTNAP5Q8WYK1 1306 aa14.58□□□□□ -0.08
CHGA-203ENST00000553866 LTBP2Q14767 1821 aa14.57□□□□□ -0.08
CHGA-203ENST00000553866 TRIM43BA6NCK2 446 aa14.57□□□□□ -0.08
CHGA-203ENST00000553866 MOXD2PA6NHM9 499 aa14.57□□□□□ -0.08
CHGA-203ENST00000553866 GOLGA8AA7E2F4 631 aa14.57□□□□□ -0.08
CHGA-203ENST00000553866 GOLGA8BA8MQT2 603 aa14.57□□□□□ -0.08
CHGA-203ENST00000553866 GCOM1H8Y6P7 765 aaPredicted RBP14.57□□□□□ -0.08
CHGA-203ENST00000553866 MEIS2O14770 477 aa14.57□□□□□ -0.08
CHGA-203ENST00000553866 RGS20O76081 388 aa14.57□□□□□ -0.08
CHGA-203ENST00000553866 POLR2MP0CAP2 368 aa14.57□□□□□ -0.08
CHGA-203ENST00000553866 ADD1P35611 737 aaKnown RBP14.57□□□□□ -0.08
CHGA-203ENST00000553866 FSCN1Q16658 493 aaKnown RBP14.57□□□□□ -0.08
CHGA-203ENST00000553866 RTN1Q16799 776 aa14.57□□□□□ -0.08
CHGA-203ENST00000553866 LY6KQ17RY6 165 aa14.57□□□□□ -0.08
CHGA-203ENST00000553866 CCDC62Q6P9F0 684 aa14.57□□□□□ -0.08
CHGA-203ENST00000553866 USP17L6PQ6QN14 398 aa14.57□□□□□ -0.08
CHGA-203ENST00000553866 CXCL17Q6UXB2 119 aa14.57□□□□□ -0.08
CHGA-203ENST00000553866 SYNE3Q6ZMZ3 975 aa14.57□□□□□ -0.08
CHGA-203ENST00000553866 SEPT14Q6ZU15 432 aa14.57□□□□□ -0.08
CHGA-203ENST00000553866 GPKOWQ92917 476 aaPredicted RBP eCLIP14.57□□□□□ -0.08
CHGA-203ENST00000553866 TRIM43Q96BQ3 446 aaPredicted RBP14.57□□□□□ -0.08
CHGA-203ENST00000553866 IWS1Q96ST2 819 aa14.57□□□□□ -0.08
CHGA-203ENST00000553866 PDCD2LQ9BRP1 358 aa14.57□□□□□ -0.08
CHGA-203ENST00000553866 AGXT2Q9BYV1 514 aa14.57□□□□□ -0.08
CHGA-203ENST00000553866 AP5M1Q9H0R1 490 aa14.57□□□□□ -0.08
CHGA-203ENST00000553866 SPC25Q9HBM1 224 aa14.57□□□□□ -0.08
CHGA-203ENST00000553866 STARD7Q9NQZ5 370 aa14.57□□□□□ -0.08
CHGA-203ENST00000553866 PDLIM7Q9NR12 457 aa14.57□□□□□ -0.08
CHGA-203ENST00000553866 Q9Y3F1 56 aa14.57□□□□□ -0.08
CHGA-203ENST00000553866 GRIN2DO15399 1336 aa14.57□□□□□ -0.08
CHGA-203ENST00000553866 EPB41L2O43491 1005 aaKnown RBP14.56□□□□□ -0.08
CHGA-203ENST00000553866 PQBP1O60828 265 aaKnown RBP14.56□□□□□ -0.08
CHGA-203ENST00000553866 SEC24BO95487 1268 aa14.56□□□□□ -0.08
CHGA-203ENST00000553866 TXNP10599 105 aaKnown RBP14.56□□□□□ -0.08
CHGA-203ENST00000553866 MYCLP12524 364 aaPredicted RBP14.56□□□□□ -0.08
CHGA-203ENST00000553866 ITGB8P26012 769 aa14.56□□□□□ -0.08
CHGA-203ENST00000553866 CDK7P50613 346 aa14.56□□□□□ -0.08
CHGA-203ENST00000553866 MDM2Q00987 491 aaPredicted RBP14.56□□□□□ -0.08
CHGA-203ENST00000553866 TOB2Q14106 344 aaPredicted RBP14.56□□□□□ -0.08
CHGA-203ENST00000553866 PGM5Q15124 567 aa14.56□□□□□ -0.08
CHGA-203ENST00000553866 STXBP2Q15833 593 aa14.56□□□□□ -0.08
CHGA-203ENST00000553866 TYW1BQ6NUM6 668 aa14.56□□□□□ -0.08
CHGA-203ENST00000553866 PCSK9Q8NBP7 692 aaKnown RBP14.56□□□□□ -0.08
CHGA-203ENST00000553866 OR6J1Q8NGC5 347 aa14.56□□□□□ -0.08
CHGA-203ENST00000553866 SCFD2Q8WU76 684 aa14.56□□□□□ -0.08
CHGA-203ENST00000553866 LARP6Q9BRS8 491 aaKnown RBP14.56□□□□□ -0.08
CHGA-203ENST00000553866 UPF3BQ9BZI7 483 aaKnown RBP14.56□□□□□ -0.08
CHGA-203ENST00000553866 ZSWIM6Q9HCJ5 1215 aa14.56□□□□□ -0.08
CHGA-203ENST00000553866 MAP3K20Q9NYL2 800 aaKnown RBP14.56□□□□□ -0.08
CHGA-203ENST00000553866 SEC63Q9UGP8 760 aaKnown RBP14.56□□□□□ -0.08
CHGA-203ENST00000553866 NAP1L2Q9ULW6 460 aaPredicted RBP14.56□□□□□ -0.08
CHGA-203ENST00000553866 PSMC6P62333 389 aa14.55□□□□□ -0.08
CHGA-203ENST00000553866 FAAP100Q0VG06 881 aa14.55□□□□□ -0.08
CHGA-203ENST00000553866 PPP2R5BQ15173 497 aa14.55□□□□□ -0.08
CHGA-203ENST00000553866 UBE2SQ16763 222 aa14.55□□□□□ -0.08
CHGA-203ENST00000553866 WWC2Q6AWC2 1192 aa14.55□□□□□ -0.08
CHGA-203ENST00000553866 RUFY3Q7L099 469 aa14.55□□□□□ -0.08
CHGA-203ENST00000553866 VSIG10LQ86VR7 867 aa14.55□□□□□ -0.08
CHGA-203ENST00000553866 FBXL16Q8N461 479 aa14.55□□□□□ -0.08
CHGA-203ENST00000553866 SAMD3Q8N6K7 520 aa14.55□□□□□ -0.08
CHGA-203ENST00000553866 PPP1R13LQ8WUF5 828 aa14.55□□□□□ -0.08
CHGA-203ENST00000553866 GLT1D1Q96MS3 346 aa14.55□□□□□ -0.08
CHGA-203ENST00000553866 MPHOSPH6Q99547 160 aaKnown RBP14.55□□□□□ -0.08
CHGA-203ENST00000553866 PRDM5Q9NQX1 630 aaPredicted RBP14.55□□□□□ -0.08
CHGA-203ENST00000553866 RBM28Q9NW13 759 aaKnown RBP14.55□□□□□ -0.08
CHGA-203ENST00000553866 V9GY48 417 aaPredicted RBP14.55□□□□□ -0.08
CHGA-203ENST00000553866 B4DLN1 442 aa14.54□□□□□ -0.08
CHGA-203ENST00000553866 PPFIA3O75145 1194 aa14.54□□□□□ -0.08
CHGA-203ENST00000553866 EIF3JO75822 258 aaKnown RBP14.54□□□□□ -0.08
CHGA-203ENST00000553866 PSMA5P28066 241 aa14.54□□□□□ -0.08
CHGA-203ENST00000553866 METAP2P50579 478 aaKnown RBP eCLIP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms