RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 KLRG2A4D1S0 409 aaPredicted RBP13.63□□□□□ -0.23
SHMT2-207ENST00000553837 SMCO2A6NFE2 343 aa13.63□□□□□ -0.23
SHMT2-207ENST00000553837 LRRC10BA6NIK2 292 aa13.63□□□□□ -0.23
SHMT2-207ENST00000553837 F8W031 263 aaPredicted RBP13.63□□□□□ -0.23
SHMT2-207ENST00000553837 SLURP2P0DP57 97 aa13.63□□□□□ -0.23
SHMT2-207ENST00000553837 CCT5P48643 541 aa13.63□□□□□ -0.23
SHMT2-207ENST00000553837 IRAK1P51617 712 aa13.63□□□□□ -0.23
SHMT2-207ENST00000553837 PICALMQ13492 652 aa13.63□□□□□ -0.23
SHMT2-207ENST00000553837 GALNT17Q6IS24 598 aa13.63□□□□□ -0.23
SHMT2-207ENST00000553837 TMTC1Q8IUR5 882 aa13.63□□□□□ -0.23
SHMT2-207ENST00000553837 CNGA4Q8IV77 575 aa13.63□□□□□ -0.23
SHMT2-207ENST00000553837 PROM2Q8N271 834 aa13.63□□□□□ -0.23
SHMT2-207ENST00000553837 RNF217Q8TC41 542 aa13.63□□□□□ -0.23
SHMT2-207ENST00000553837 COG1Q8WTW3 980 aa13.63□□□□□ -0.23
SHMT2-207ENST00000553837 KAT2BQ92831 832 aa13.63□□□□□ -0.23
SHMT2-207ENST00000553837 PLCD4Q9BRC7 762 aa13.63□□□□□ -0.23
SHMT2-207ENST00000553837 LZTS2Q9BRK4 669 aa13.63□□□□□ -0.23
SHMT2-207ENST00000553837 PYM1Q9BRP8 204 aaKnown RBP13.63□□□□□ -0.23
SHMT2-207ENST00000553837 CRACR2AQ9BSW2 395 aa13.63□□□□□ -0.23
SHMT2-207ENST00000553837 TMEM260Q9NX78 707 aa13.63□□□□□ -0.23
SHMT2-207ENST00000553837 FRMPD2Q68DX3 1309 aaPredicted RBP13.63□□□□□ -0.23
SHMT2-207ENST00000553837 FOCADQ5VW36 1801 aa13.63□□□□□ -0.23
SHMT2-207ENST00000553837 TARSL2A2RTX5 802 aaKnown RBP13.62□□□□□ -0.23
SHMT2-207ENST00000553837 EDIL3O43854 480 aa13.62□□□□□ -0.23
SHMT2-207ENST00000553837 MFAP3LO75121 409 aa13.62□□□□□ -0.23
SHMT2-207ENST00000553837 COPB1P53618 953 aaKnown RBP13.62□□□□□ -0.23
SHMT2-207ENST00000553837 LETM2Q2VYF4 491 aa13.62□□□□□ -0.23
SHMT2-207ENST00000553837 ILDR2Q71H61 639 aa13.62□□□□□ -0.23
SHMT2-207ENST00000553837 ADSSL1Q8N142 457 aa13.62□□□□□ -0.23
SHMT2-207ENST00000553837 CTAGE1Q96RT6 745 aa13.62□□□□□ -0.23
SHMT2-207ENST00000553837 CRAMP1Q96RY5 1269 aa13.62□□□□□ -0.23
SHMT2-207ENST00000553837 CCSER1Q9C0I3 900 aa13.62□□□□□ -0.23
SHMT2-207ENST00000553837 KBTBD4Q9NVX7 518 aa13.62□□□□□ -0.23
SHMT2-207ENST00000553837 LRRC37AA6NMS7 1700 aa13.62□□□□□ -0.23
SHMT2-207ENST00000553837 SHTN1A0MZ66 631 aa13.62□□□□□ -0.23
SHMT2-207ENST00000553837 AKR1B1P15121 316 aa13.62□□□□□ -0.23
SHMT2-207ENST00000553837 PLCG2P16885 1265 aa13.62□□□□□ -0.23
SHMT2-207ENST00000553837 INPP5BP32019 993 aa13.62□□□□□ -0.23
SHMT2-207ENST00000553837 SSR1P43307 286 aaKnown RBP13.62□□□□□ -0.23
SHMT2-207ENST00000553837 GABPAQ06546 454 aa13.62□□□□□ -0.23
SHMT2-207ENST00000553837 TXNRD1Q16881 649 aa13.62□□□□□ -0.23
SHMT2-207ENST00000553837 FILIP1LQ4L180 1135 aa13.62□□□□□ -0.23
SHMT2-207ENST00000553837 TCP11X2Q5H9J9 407 aa13.62□□□□□ -0.23
SHMT2-207ENST00000553837 ZNF287Q9HBT7 754 aa13.62□□□□□ -0.23
SHMT2-207ENST00000553837 BIN2Q9UBW5 565 aaPredicted RBP13.62□□□□□ -0.23
SHMT2-207ENST00000553837 ADAMTSL1Q8N6G6 1762 aa13.61□□□□□ -0.23
SHMT2-207ENST00000553837 ANKRD31Q8N7Z5 1873 aa13.61□□□□□ -0.23
SHMT2-207ENST00000553837 KCNJ18B7U540 433 aa13.61□□□□□ -0.23
SHMT2-207ENST00000553837 TULP1O00294 542 aaPredicted RBP13.61□□□□□ -0.23
SHMT2-207ENST00000553837 CCNT1O60563 726 aaKnown RBP13.61□□□□□ -0.23
SHMT2-207ENST00000553837 TRIM37O94972 964 aa13.61□□□□□ -0.23
SHMT2-207ENST00000553837 PDHBP11177 359 aa13.61□□□□□ -0.23
SHMT2-207ENST00000553837 PLCG1P19174 1290 aa13.61□□□□□ -0.23
SHMT2-207ENST00000553837 FECHP22830 423 aa13.61□□□□□ -0.23
SHMT2-207ENST00000553837 UBA7P41226 1012 aa13.61□□□□□ -0.23
SHMT2-207ENST00000553837 EIF6P56537 245 aaKnown RBP13.61□□□□□ -0.23
SHMT2-207ENST00000553837 AMPD2Q01433 879 aa13.61□□□□□ -0.23
SHMT2-207ENST00000553837 PPFIA1Q13136 1202 aa13.61□□□□□ -0.23
SHMT2-207ENST00000553837 KCNJ12Q14500 433 aa13.61□□□□□ -0.23
SHMT2-207ENST00000553837 GBP6Q6ZN66 633 aa13.61□□□□□ -0.23
SHMT2-207ENST00000553837 LRRC47Q8N1G4 583 aaKnown RBP13.61□□□□□ -0.23
SHMT2-207ENST00000553837 TBC1D22AQ8WUA7 517 aa13.61□□□□□ -0.23
SHMT2-207ENST00000553837 SGSM3Q96HU1 749 aa13.61□□□□□ -0.23
SHMT2-207ENST00000553837 PPEF1O14829 653 aaPredicted RBP13.61□□□□□ -0.23
SHMT2-207ENST00000553837 N4BP3O15049 544 aa13.61□□□□□ -0.23
SHMT2-207ENST00000553837 GGCXP38435 758 aa13.61□□□□□ -0.23
SHMT2-207ENST00000553837 PRPHP41219 470 aa13.61□□□□□ -0.23
SHMT2-207ENST00000553837 RRP36Q96EU6 259 aaKnown RBP13.61□□□□□ -0.23
SHMT2-207ENST00000553837 RPGRIP1Q96KN7 1286 aa13.61□□□□□ -0.23
SHMT2-207ENST00000553837 MMTAG2Q9BU76 263 aaKnown RBP13.61□□□□□ -0.23
SHMT2-207ENST00000553837 RIOX1Q9H6W3 641 aa13.61□□□□□ -0.23
SHMT2-207ENST00000553837 RMND1Q9NWS8 449 aa13.61□□□□□ -0.23
SHMT2-207ENST00000553837 MTMR4Q9NYA4 1195 aa13.61□□□□□ -0.23
SHMT2-207ENST00000553837 ITIH6Q6UXX5 1313 aa13.6□□□□□ -0.23
SHMT2-207ENST00000553837 IGKV6D-41A0A0C4DH26 115 aa13.6□□□□□ -0.23
SHMT2-207ENST00000553837 GOLGA6CA6NDK9 693 aa13.6□□□□□ -0.23
SHMT2-207ENST00000553837 SOCS7O14512 581 aa13.6□□□□□ -0.23
SHMT2-207ENST00000553837 ABL1P00519 1130 aa13.6□□□□□ -0.23
SHMT2-207ENST00000553837 TFRCP02786 760 aaKnown RBP13.6□□□□□ -0.23
SHMT2-207ENST00000553837 OR52Z1P0C646 297 aa13.6□□□□□ -0.23
SHMT2-207ENST00000553837 GOLGA6DP0CG33 693 aa13.6□□□□□ -0.23
SHMT2-207ENST00000553837 NONOQ15233 471 aaKnown RBP eCLIP13.6□□□□□ -0.23
SHMT2-207ENST00000553837 C11orf91Q3C1V1 193 aa13.6□□□□□ -0.23
SHMT2-207ENST00000553837 NCAPH2Q6IBW4 605 aa13.6□□□□□ -0.23
SHMT2-207ENST00000553837 KRT25Q7Z3Z0 450 aa13.6□□□□□ -0.23
SHMT2-207ENST00000553837 SP8Q8IXZ3 490 aa13.6□□□□□ -0.23
SHMT2-207ENST00000553837 RASSF8Q8NHQ8 419 aa13.6□□□□□ -0.23
SHMT2-207ENST00000553837 TBCKQ8TEA7 893 aa13.6□□□□□ -0.23
SHMT2-207ENST00000553837 COA7Q96BR5 231 aa13.6□□□□□ -0.23
SHMT2-207ENST00000553837 CAPS2Q9BXY5 557 aa13.6□□□□□ -0.23
SHMT2-207ENST00000553837 A1CFQ9NQ94 594 aaKnown RBP13.6□□□□□ -0.23
SHMT2-207ENST00000553837 GOLGA6AQ9NYA3 693 aa13.6□□□□□ -0.23
SHMT2-207ENST00000553837 TRPC5Q9UL62 973 aaPredicted RBP13.6□□□□□ -0.23
SHMT2-207ENST00000553837 ZC3H4Q9UPT8 1303 aaKnown RBP13.59□□□□□ -0.23
SHMT2-207ENST00000553837 A6NNZ2 444 aa13.59□□□□□ -0.23
SHMT2-207ENST00000553837 LAD1O00515 517 aa13.59□□□□□ -0.23
SHMT2-207ENST00000553837 ARHGAP25P42331 645 aa13.59□□□□□ -0.23
SHMT2-207ENST00000553837 TECP42680 631 aa13.59□□□□□ -0.23
SHMT2-207ENST00000553837 ERVK-24P63145 666 aa13.59□□□□□ -0.23
SHMT2-207ENST00000553837 NBPF9Q3BBW0 867 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms