RNA–Protein interactions for RNA: ENST00000534825.5

CAPRIN1-217, Transcript of cell cycle associated protein 1, humanhuman

TSL 3

Gene CAPRIN1, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-217ENST00000534825 MRPL12P52815 198 aaKnown RBP20.73■□□□□ 0.91
CAPRIN1-217ENST00000534825 TRAF1Q13077 416 aa20.73■□□□□ 0.91
CAPRIN1-217ENST00000534825 RAB11FIP4Q86YS3 637 aa20.73■□□□□ 0.91
CAPRIN1-217ENST00000534825 CMTR1Q8N1G2 835 aaKnown RBP20.73■□□□□ 0.91
CAPRIN1-217ENST00000534825 MPHOSPH6Q99547 160 aaKnown RBP20.73■□□□□ 0.91
CAPRIN1-217ENST00000534825 AP5M1Q9H0R1 490 aa20.73■□□□□ 0.91
CAPRIN1-217ENST00000534825 STARD7Q9NQZ5 370 aa20.73■□□□□ 0.91
CAPRIN1-217ENST00000534825 BRPF3Q9ULD4 1205 aa20.73■□□□□ 0.91
CAPRIN1-217ENST00000534825 SNX14Q9Y5W7 946 aa20.73■□□□□ 0.91
CAPRIN1-217ENST00000534825 FSCN1Q16658 493 aaKnown RBP20.72■□□□□ 0.91
CAPRIN1-217ENST00000534825 ANKRD33Q7Z3H0 272 aa20.72■□□□□ 0.91
CAPRIN1-217ENST00000534825 SH3RF1Q7Z6J0 888 aa20.72■□□□□ 0.91
CAPRIN1-217ENST00000534825 PIBF1Q8WXW3 757 aa20.72■□□□□ 0.91
CAPRIN1-217ENST00000534825 GLT1D1Q96MS3 346 aa20.72■□□□□ 0.91
CAPRIN1-217ENST00000534825 PXMP2Q9NR77 195 aa20.72■□□□□ 0.91
CAPRIN1-217ENST00000534825 TRIM43BA6NCK2 446 aa20.71■□□□□ 0.91
CAPRIN1-217ENST00000534825 REC8O95072 547 aa20.71■□□□□ 0.91
CAPRIN1-217ENST00000534825 NR3C2P08235 984 aa20.71■□□□□ 0.91
CAPRIN1-217ENST00000534825 HMGB1P09429 215 aaKnown RBP20.71■□□□□ 0.91
CAPRIN1-217ENST00000534825 HOXA13P31271 388 aaPredicted RBP20.71■□□□□ 0.91
CAPRIN1-217ENST00000534825 FXR1P51114 621 aaKnown RBP eCLIP20.71■□□□□ 0.91
CAPRIN1-217ENST00000534825 ARHGEF16Q5VV41 709 aa20.71■□□□□ 0.91
CAPRIN1-217ENST00000534825 CCDC62Q6P9F0 684 aa20.71■□□□□ 0.91
CAPRIN1-217ENST00000534825 APOA5Q6Q788 366 aa20.71■□□□□ 0.91
CAPRIN1-217ENST00000534825 SCFD2Q8WU76 684 aa20.71■□□□□ 0.91
CAPRIN1-217ENST00000534825 TRIM43Q96BQ3 446 aaPredicted RBP20.71■□□□□ 0.91
CAPRIN1-217ENST00000534825 RRP36Q96EU6 259 aaKnown RBP20.71■□□□□ 0.91
CAPRIN1-217ENST00000534825 TOX2Q96NM4 488 aa20.71■□□□□ 0.91
CAPRIN1-217ENST00000534825 PDLIM7Q9NR12 457 aa20.71■□□□□ 0.91
CAPRIN1-217ENST00000534825 ARIH2O95376 493 aa20.7■□□□□ 0.9
CAPRIN1-217ENST00000534825 CPA1P15085 419 aa20.7■□□□□ 0.9
CAPRIN1-217ENST00000534825 MDM2Q00987 491 aaPredicted RBP20.7■□□□□ 0.9
CAPRIN1-217ENST00000534825 STXBP2Q15833 593 aa20.7■□□□□ 0.9
CAPRIN1-217ENST00000534825 CXCL17Q6UXB2 119 aa20.7■□□□□ 0.9
CAPRIN1-217ENST00000534825 MYH6P13533 1939 aa20.7■□□□□ 0.9
CAPRIN1-217ENST00000534825 LRRC37A2A6NM11 1700 aa20.7■□□□□ 0.9
CAPRIN1-217ENST00000534825 A0A1W2PPC1 479 aa20.69■□□□□ 0.9
CAPRIN1-217ENST00000534825 GCOM1H8Y6P7 765 aaPredicted RBP20.69■□□□□ 0.9
CAPRIN1-217ENST00000534825 NKRFO15226 690 aaKnown RBP eCLIP20.69■□□□□ 0.95e-6■■■■□ 23
CAPRIN1-217ENST00000534825 EPB41L2O43491 1005 aaKnown RBP20.69■□□□□ 0.9
CAPRIN1-217ENST00000534825 POLR2MP0CAP2 368 aa20.69■□□□□ 0.9
CAPRIN1-217ENST00000534825 TXNP10599 105 aaKnown RBP20.69■□□□□ 0.9
CAPRIN1-217ENST00000534825 EIF2AK2P19525 551 aaKnown RBP20.69■□□□□ 0.9
CAPRIN1-217ENST00000534825 ITGB8P26012 769 aa20.69■□□□□ 0.9
CAPRIN1-217ENST00000534825 FAAP100Q0VG06 881 aa20.69■□□□□ 0.9
CAPRIN1-217ENST00000534825 TMTC3Q6ZXV5 915 aa20.69■□□□□ 0.9
CAPRIN1-217ENST00000534825 MICU3Q86XE3 530 aa20.69■□□□□ 0.9
CAPRIN1-217ENST00000534825 SLC43A3Q8NBI5 491 aa20.69■□□□□ 0.9
CAPRIN1-217ENST00000534825 COPS5Q92905 334 aa20.69■□□□□ 0.9
CAPRIN1-217ENST00000534825 VTI1AQ96AJ9 217 aa20.69■□□□□ 0.9
CAPRIN1-217ENST00000534825 PDCD2LQ9BRP1 358 aa20.69■□□□□ 0.9
CAPRIN1-217ENST00000534825 USP26Q9BXU7 913 aa20.69■□□□□ 0.9
CAPRIN1-217ENST00000534825 GRIN2DO15399 1336 aa20.69■□□□□ 0.9
CAPRIN1-217ENST00000534825 ARVCFO00192 962 aa20.68■□□□□ 0.9
CAPRIN1-217ENST00000534825 ZEB2O60315 1214 aa20.68■□□□□ 0.9
CAPRIN1-217ENST00000534825 PQBP1O60828 265 aaKnown RBP20.68■□□□□ 0.9
CAPRIN1-217ENST00000534825 EIF3JO75822 258 aaKnown RBP20.68■□□□□ 0.9
CAPRIN1-217ENST00000534825 FUT2Q10981 343 aa20.68■□□□□ 0.9
CAPRIN1-217ENST00000534825 TTLL4Q14679 1199 aa20.68■□□□□ 0.9
CAPRIN1-217ENST00000534825 PPP2R5BQ15173 497 aa20.68■□□□□ 0.9
CAPRIN1-217ENST00000534825 SYNE3Q6ZMZ3 975 aa20.68■□□□□ 0.9
CAPRIN1-217ENST00000534825 SEPT14Q6ZU15 432 aa20.68■□□□□ 0.9
CAPRIN1-217ENST00000534825 VSIG10LQ86VR7 867 aa20.68■□□□□ 0.9
CAPRIN1-217ENST00000534825 CCDC82Q8N4S0 544 aa20.68■□□□□ 0.9
CAPRIN1-217ENST00000534825 JAKMIP1Q96N16 626 aaKnown RBP20.68■□□□□ 0.9
CAPRIN1-217ENST00000534825 FAM217BQ9NTX9 383 aaPredicted RBP20.68■□□□□ 0.9
CAPRIN1-217ENST00000534825 PRKAG2Q9UGJ0 569 aa20.68■□□□□ 0.9
CAPRIN1-217ENST00000534825 LAMA3Q16787 3333 aa20.68■□□□□ 0.9
CAPRIN1-217ENST00000534825 A0A0U1RQG5 324 aaPredicted RBP20.67■□□□□ 0.9
CAPRIN1-217ENST00000534825 hCG_1642624A0A1W2PR95 340 aa20.67■□□□□ 0.9
CAPRIN1-217ENST00000534825 KIAA0355O15063 1070 aa20.67■□□□□ 0.9
CAPRIN1-217ENST00000534825 CABYRO75952 493 aa20.67■□□□□ 0.9
CAPRIN1-217ENST00000534825 RGS20O76081 388 aa20.67■□□□□ 0.9
CAPRIN1-217ENST00000534825 SLC34A2O95436 690 aa20.67■□□□□ 0.9
CAPRIN1-217ENST00000534825 CLTBP09497 229 aa20.67■□□□□ 0.9
CAPRIN1-217ENST00000534825 FBXL16Q8N461 479 aa20.67■□□□□ 0.9
CAPRIN1-217ENST00000534825 PRDM5Q9NQX1 630 aaPredicted RBP20.67■□□□□ 0.9
CAPRIN1-217ENST00000534825 A6NJR5 290 aa20.66■□□□□ 0.9
CAPRIN1-217ENST00000534825 MEIS2O14770 477 aa20.66■□□□□ 0.9
CAPRIN1-217ENST00000534825 ZBTB43O43298 467 aa20.66■□□□□ 0.9
CAPRIN1-217ENST00000534825 PGM5Q15124 567 aa20.66■□□□□ 0.9
CAPRIN1-217ENST00000534825 LY6KQ17RY6 165 aa20.66■□□□□ 0.9
CAPRIN1-217ENST00000534825 FCHSD1Q86WN1 690 aa20.66■□□□□ 0.9
CAPRIN1-217ENST00000534825 OR6J1Q8NGC5 347 aa20.66■□□□□ 0.9
CAPRIN1-217ENST00000534825 IL31RAQ8NI17 732 aa20.66■□□□□ 0.9
CAPRIN1-217ENST00000534825 LBHD1Q9BQE6 289 aaPredicted RBP20.66■□□□□ 0.9
CAPRIN1-217ENST00000534825 UBE2OQ9C0C9 1292 aaKnown RBP20.66■□□□□ 0.9
CAPRIN1-217ENST00000534825 SEC63Q9UGP8 760 aaKnown RBP20.66■□□□□ 0.9
CAPRIN1-217ENST00000534825 DDX41Q9UJV9 622 aaKnown RBP20.66■□□□□ 0.9
CAPRIN1-217ENST00000534825 KLF18A0A0U1RQI7 1052 aa20.65■□□□□ 0.9
CAPRIN1-217ENST00000534825 DCDC2CA8MYV0 355 aa20.65■□□□□ 0.9
CAPRIN1-217ENST00000534825 PURAQ00577 322 aaKnown RBP20.65■□□□□ 0.9
CAPRIN1-217ENST00000534825 USP17L6PQ6QN14 398 aa20.65■□□□□ 0.9
CAPRIN1-217ENST00000534825 BLOC1S2Q6QNY1 142 aa20.65■□□□□ 0.9
CAPRIN1-217ENST00000534825 Q6ZUG5 572 aa20.65■□□□□ 0.9
CAPRIN1-217ENST00000534825 BADQ92934 168 aa20.65■□□□□ 0.9
CAPRIN1-217ENST00000534825 AGXT2Q9BYV1 514 aa20.65■□□□□ 0.9
CAPRIN1-217ENST00000534825 TMEM39AQ9NV64 488 aa20.65■□□□□ 0.9
CAPRIN1-217ENST00000534825 RBM28Q9NW13 759 aaKnown RBP20.65■□□□□ 0.9
CAPRIN1-217ENST00000534825 PIK3CDO00329 1044 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms