RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 RCSD1Q6JBY9 416 aa8.11□□□□□ -1.11
VPS11-201ENST00000524454 ADGRD1Q6QNK2 874 aa8.11□□□□□ -1.11
VPS11-201ENST00000524454 FERMT3Q86UX7 667 aa8.11□□□□□ -1.11
VPS11-201ENST00000524454 NOSTRINQ8IVI9 506 aa8.11□□□□□ -1.11
VPS11-201ENST00000524454 NEDD1Q8NHV4 660 aa8.11□□□□□ -1.11
VPS11-201ENST00000524454 FOXD4L4Q8WXT5 416 aaPredicted RBP8.11□□□□□ -1.11
VPS11-201ENST00000524454 COA7Q96BR5 231 aa8.11□□□□□ -1.11
VPS11-201ENST00000524454 ARMC5Q96C12 935 aa8.11□□□□□ -1.11
VPS11-201ENST00000524454 ATG4CQ96DT6 458 aa8.11□□□□□ -1.11
VPS11-201ENST00000524454 SLC4A5Q9BY07 1137 aa8.11□□□□□ -1.11
VPS11-201ENST00000524454 GZF1Q9H116 711 aaPredicted RBP8.11□□□□□ -1.11
VPS11-201ENST00000524454 KAT14Q9H8E8 782 aa8.11□□□□□ -1.11
VPS11-201ENST00000524454 KANSL2Q9H9L4 492 aa8.11□□□□□ -1.11
VPS11-201ENST00000524454 MTMR7Q9Y216 660 aa8.11□□□□□ -1.11
VPS11-201ENST00000524454 VPS9D1Q9Y2B5 631 aa8.11□□□□□ -1.11
VPS11-201ENST00000524454 TCHHQ07283 1943 aa8.11□□□□□ -1.11
VPS11-201ENST00000524454 CENPFP49454 3210 aa8.1□□□□□ -1.11
VPS11-201ENST00000524454 ZNFX1Q9P2E3 1918 aaKnown RBP8.1□□□□□ -1.11
VPS11-201ENST00000524454 FAM237AA0A1B0GTK4 181 aa8.1□□□□□ -1.11
VPS11-201ENST00000524454 GADD45BO75293 160 aaPredicted RBP8.1□□□□□ -1.11
VPS11-201ENST00000524454 NDUFB10O96000 172 aa8.1□□□□□ -1.11
VPS11-201ENST00000524454 GNRH1P01148 92 aa8.1□□□□□ -1.11
VPS11-201ENST00000524454 CCL5P13501 91 aa8.1□□□□□ -1.11
VPS11-201ENST00000524454 CYP2B6P20813 491 aa8.1□□□□□ -1.11
VPS11-201ENST00000524454 CALML3P27482 149 aa8.1□□□□□ -1.11
VPS11-201ENST00000524454 TRAPPC10P48553 1259 aa8.1□□□□□ -1.11
VPS11-201ENST00000524454 MLLT1Q03111 559 aaPredicted RBP8.1□□□□□ -1.11
VPS11-201ENST00000524454 FAM160A1Q05DH4 1040 aa8.1□□□□□ -1.11
VPS11-201ENST00000524454 PLS1Q14651 629 aa8.1□□□□□ -1.11
VPS11-201ENST00000524454 SLC39A14Q15043 492 aa8.1□□□□□ -1.11
VPS11-201ENST00000524454 CCL14Q16627 93 aa8.1□□□□□ -1.11
VPS11-201ENST00000524454 GPR142Q7Z601 462 aa8.1□□□□□ -1.11
VPS11-201ENST00000524454 CCAR1Q8IX12 1150 aaKnown RBP8.1□□□□□ -1.11
VPS11-201ENST00000524454 ELOA2Q8IYF1 753 aaPredicted RBP8.1□□□□□ -1.11
VPS11-201ENST00000524454 LINC00301Q8NCQ3 95 aa8.1□□□□□ -1.11
VPS11-201ENST00000524454 SPZ1Q9BXG8 430 aa8.1□□□□□ -1.11
VPS11-201ENST00000524454 SLC26A6Q9BXS9 759 aa8.1□□□□□ -1.11
VPS11-201ENST00000524454 UNC93B1Q9H1C4 597 aa8.1□□□□□ -1.11
VPS11-201ENST00000524454 NUP62CLQ9H1M0 184 aa8.1□□□□□ -1.11
VPS11-201ENST00000524454 SH2D4AQ9H788 454 aa8.1□□□□□ -1.11
VPS11-201ENST00000524454 BRMS1Q9HCU9 246 aa8.1□□□□□ -1.11
VPS11-201ENST00000524454 GOPCQ9HD26 462 aa8.1□□□□□ -1.11
VPS11-201ENST00000524454 IL17RBQ9NRM6 502 aa8.1□□□□□ -1.11
VPS11-201ENST00000524454 GJD2Q9UKL4 321 aa8.1□□□□□ -1.11
VPS11-201ENST00000524454 CEP131Q9UPN4 1083 aa8.1□□□□□ -1.11
VPS11-201ENST00000524454 CNTNAP5Q8WYK1 1306 aa8.09□□□□□ -1.11
VPS11-201ENST00000524454 PLXNA1Q9UIW2 1896 aa8.09□□□□□ -1.11
VPS11-201ENST00000524454 FRMPD3Q5JV73 1810 aa8.09□□□□□ -1.11
VPS11-201ENST00000524454 SYCE3A1L190 88 aa8.09□□□□□ -1.11
VPS11-201ENST00000524454 F5H6K3 240 aa8.09□□□□□ -1.11
VPS11-201ENST00000524454 TK2O00142 265 aa8.09□□□□□ -1.11
VPS11-201ENST00000524454 WDR46O15213 610 aaKnown RBP8.09□□□□□ -1.11
VPS11-201ENST00000524454 HRO43593 1189 aa8.09□□□□□ -1.11
VPS11-201ENST00000524454 INHAP05111 366 aa8.09□□□□□ -1.11
VPS11-201ENST00000524454 CCDC192P0DO97 292 aa8.09□□□□□ -1.11
VPS11-201ENST00000524454 TOP1P11387 765 aaKnown RBP8.09□□□□□ -1.11
VPS11-201ENST00000524454 XRCC6P12956 609 aaKnown RBP eCLIP8.09□□□□□ -1.11
VPS11-201ENST00000524454 RGS19P49795 217 aa8.09□□□□□ -1.11
VPS11-201ENST00000524454 PRMT2P55345 433 aa8.09□□□□□ -1.11
VPS11-201ENST00000524454 KLRC3Q07444 240 aa8.09□□□□□ -1.11
VPS11-201ENST00000524454 ORC2Q13416 577 aaPredicted RBP8.09□□□□□ -1.11
VPS11-201ENST00000524454 COG2Q14746 738 aa8.09□□□□□ -1.11
VPS11-201ENST00000524454 GRM4Q14833 912 aa8.09□□□□□ -1.11
VPS11-201ENST00000524454 HS1BP3Q53T59 392 aa8.09□□□□□ -1.11
VPS11-201ENST00000524454 ANO1Q5XXA6 986 aa8.09□□□□□ -1.11
VPS11-201ENST00000524454 CCDC73Q6ZRK6 1079 aa8.09□□□□□ -1.11
VPS11-201ENST00000524454 PLEKHH3Q7Z736 793 aa8.09□□□□□ -1.11
VPS11-201ENST00000524454 DAGLBQ8NCG7 672 aa8.09□□□□□ -1.11
VPS11-201ENST00000524454 PNMA1Q8ND90 353 aa8.09□□□□□ -1.11
VPS11-201ENST00000524454 CCDC148Q8NFR7 591 aa8.09□□□□□ -1.11
VPS11-201ENST00000524454 MRPS27Q92552 414 aaKnown RBP8.09□□□□□ -1.11
VPS11-201ENST00000524454 LPAR1Q92633 364 aa8.09□□□□□ -1.11
VPS11-201ENST00000524454 PHKBQ93100 1093 aa8.09□□□□□ -1.11
VPS11-201ENST00000524454 TIGD1Q96MW7 591 aa8.09□□□□□ -1.11
VPS11-201ENST00000524454 USP28Q96RU2 1077 aa8.09□□□□□ -1.11
VPS11-201ENST00000524454 ZKSCAN3Q9BRR0 538 aa8.09□□□□□ -1.11
VPS11-201ENST00000524454 PHF20Q9BVI0 1012 aa8.09□□□□□ -1.11
VPS11-201ENST00000524454 MOV10L1Q9BXT6 1211 aaKnown RBP8.09□□□□□ -1.11
VPS11-201ENST00000524454 TSPY26PQ9H489 355 aa8.09□□□□□ -1.11
VPS11-201ENST00000524454 CLSTN2Q9H4D0 955 aa8.09□□□□□ -1.11
VPS11-201ENST00000524454 SENP2Q9HC62 589 aa8.09□□□□□ -1.11
VPS11-201ENST00000524454 GDPD2Q9HCC8 539 aa8.09□□□□□ -1.11
VPS11-201ENST00000524454 MTMR4Q9NYA4 1195 aa8.09□□□□□ -1.11
VPS11-201ENST00000524454 NYAP2Q9P242 653 aa8.09□□□□□ -1.11
VPS11-201ENST00000524454 RABGAP1Q9Y3P9 1069 aa8.09□□□□□ -1.11
VPS11-201ENST00000524454 C3orf80F5H4A9 247 aa8.08□□□□□ -1.12
VPS11-201ENST00000524454 SPTLC2O15270 562 aa8.08□□□□□ -1.12
VPS11-201ENST00000524454 TTLL1O95922 423 aa8.08□□□□□ -1.12
VPS11-201ENST00000524454 CMA1P23946 247 aa8.08□□□□□ -1.12
VPS11-201ENST00000524454 MAPK4P31152 587 aa8.08□□□□□ -1.12
VPS11-201ENST00000524454 SNAP25P60880 206 aa8.08□□□□□ -1.12
VPS11-201ENST00000524454 CCDC173Q0VFZ6 552 aa8.08□□□□□ -1.12
VPS11-201ENST00000524454 GNL2Q13823 731 aaKnown RBP8.08□□□□□ -1.12
VPS11-201ENST00000524454 TMEM132BQ14DG7 1078 aa8.08□□□□□ -1.12
VPS11-201ENST00000524454 STK38Q15208 465 aa8.08□□□□□ -1.12
VPS11-201ENST00000524454 PFKFB3Q16875 520 aaPredicted RBP8.08□□□□□ -1.12
VPS11-201ENST00000524454 SLFN13Q68D06 897 aa8.08□□□□□ -1.12
VPS11-201ENST00000524454 LBX2Q6XYB7 198 aa8.08□□□□□ -1.12
VPS11-201ENST00000524454 NCAPG2Q86XI2 1143 aa8.08□□□□□ -1.12
VPS11-201ENST00000524454 GAS2L3Q86XJ1 694 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms