RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 FGAP02671 866 aa5.5□□□□□ -1.53
SMARCA5-202ENST00000508573 VAV1P15498 845 aa5.5□□□□□ -1.53
SMARCA5-202ENST00000508573 MASP1P48740 699 aa5.5□□□□□ -1.53
SMARCA5-202ENST00000508573 NFKB2Q00653 900 aa5.5□□□□□ -1.53
SMARCA5-202ENST00000508573 LMOD3Q0VAK6 560 aa5.5□□□□□ -1.53
SMARCA5-202ENST00000508573 SAFB2Q14151 953 aaKnown RBP eCLIP5.5□□□□□ -1.53
SMARCA5-202ENST00000508573 SYCP2LQ5T4T6 812 aa5.5□□□□□ -1.53
SMARCA5-202ENST00000508573 SLCO6A1Q86UG4 719 aa5.5□□□□□ -1.53
SMARCA5-202ENST00000508573 WDR75Q8IWA0 830 aaKnown RBP5.5□□□□□ -1.53
SMARCA5-202ENST00000508573 TP53I13Q8NBR0 393 aaPredicted RBP5.5□□□□□ -1.53
SMARCA5-202ENST00000508573 TMEM52Q8NDY8 209 aa5.5□□□□□ -1.53
SMARCA5-202ENST00000508573 ZNF296Q8WUU4 475 aaPredicted RBP5.5□□□□□ -1.53
SMARCA5-202ENST00000508573 MPHOSPH6Q99547 160 aaKnown RBP5.5□□□□□ -1.53
SMARCA5-202ENST00000508573 TMX4Q9H1E5 349 aaPredicted RBP5.5□□□□□ -1.53
SMARCA5-202ENST00000508573 EHMT1Q9H9B1 1298 aa5.5□□□□□ -1.53
SMARCA5-202ENST00000508573 LUC7LQ9NQ29 371 aaKnown RBP5.5□□□□□ -1.53
SMARCA5-202ENST00000508573 JADE2Q9NQC1 790 aa5.5□□□□□ -1.53
SMARCA5-202ENST00000508573 AP5S1Q9NUS5 200 aa5.5□□□□□ -1.53
SMARCA5-202ENST00000508573 ERVK13-1Q9NX77 482 aa5.5□□□□□ -1.53
SMARCA5-202ENST00000508573 SUPT16HQ9Y5B9 1047 aaKnown RBP5.5□□□□□ -1.53
SMARCA5-202ENST00000508573 FAM221BA6H8Z2 402 aa5.49□□□□□ -1.53
SMARCA5-202ENST00000508573 IFRD1O00458 451 aaPredicted RBP5.49□□□□□ -1.53
SMARCA5-202ENST00000508573 KIF3BO15066 747 aa5.49□□□□□ -1.53
SMARCA5-202ENST00000508573 ENDOUP21128 410 aaKnown RBP5.49□□□□□ -1.53
SMARCA5-202ENST00000508573 BMP8BP34820 402 aa5.49□□□□□ -1.53
SMARCA5-202ENST00000508573 CTSKP43235 329 aa5.49□□□□□ -1.53
SMARCA5-202ENST00000508573 KCNC1P48547 511 aa5.49□□□□□ -1.53
SMARCA5-202ENST00000508573 CLCQ05315 142 aa5.49□□□□□ -1.53
SMARCA5-202ENST00000508573 CBX2Q14781 532 aaPredicted RBP5.49□□□□□ -1.53
SMARCA5-202ENST00000508573 SEZ6Q53EL9 994 aa5.49□□□□□ -1.53
SMARCA5-202ENST00000508573 RPTNQ6XPR3 784 aa5.49□□□□□ -1.53
SMARCA5-202ENST00000508573 NLRC3Q7RTR2 1065 aa5.49□□□□□ -1.53
SMARCA5-202ENST00000508573 KIAA0907Q7Z7F0 614 aaPredicted RBP5.49□□□□□ -1.53
SMARCA5-202ENST00000508573 PCGF5Q86SE9 256 aa5.49□□□□□ -1.53
SMARCA5-202ENST00000508573 TMEM192Q8IY95 271 aa5.49□□□□□ -1.53
SMARCA5-202ENST00000508573 TEPSINQ96N21 525 aa5.49□□□□□ -1.53
SMARCA5-202ENST00000508573 JMJD8Q96S16 334 aa5.49□□□□□ -1.53
SMARCA5-202ENST00000508573 ARPC5LQ9BPX5 153 aa5.49□□□□□ -1.53
SMARCA5-202ENST00000508573 SLKQ9H2G2 1235 aaPredicted RBP5.49□□□□□ -1.53
SMARCA5-202ENST00000508573 TMX1Q9H3N1 280 aa5.49□□□□□ -1.53
SMARCA5-202ENST00000508573 ANTXR1Q9H6X2 564 aa5.49□□□□□ -1.53
SMARCA5-202ENST00000508573 HOMER2Q9NSB8 354 aa5.49□□□□□ -1.53
SMARCA5-202ENST00000508573 SNTG2Q9NY99 539 aa5.49□□□□□ -1.53
SMARCA5-202ENST00000508573 IMPACTQ9P2X3 320 aa5.49□□□□□ -1.53
SMARCA5-202ENST00000508573 PCDHB12Q9Y5F1 795 aa5.49□□□□□ -1.53
SMARCA5-202ENST00000508573 A0A1W2PQJ5 194 aa5.48□□□□□ -1.53
SMARCA5-202ENST00000508573 ZC3H12DA2A288 527 aaKnown RBP5.48□□□□□ -1.53
SMARCA5-202ENST00000508573 ZNF205O95201 554 aa5.48□□□□□ -1.53
SMARCA5-202ENST00000508573 ADRB1P08588 477 aa5.48□□□□□ -1.53
SMARCA5-202ENST00000508573 CD53P19397 219 aa5.48□□□□□ -1.53
SMARCA5-202ENST00000508573 CCNFP41002 786 aa5.48□□□□□ -1.53
SMARCA5-202ENST00000508573 CRKP46108 304 aa5.48□□□□□ -1.53
SMARCA5-202ENST00000508573 LIMS1P48059 325 aa5.48□□□□□ -1.53
SMARCA5-202ENST00000508573 KRTAP10-2P60368 255 aa5.48□□□□□ -1.53
SMARCA5-202ENST00000508573 MVKQ03426 396 aa5.48□□□□□ -1.53
SMARCA5-202ENST00000508573 PAK2Q13177 524 aa5.48□□□□□ -1.53
SMARCA5-202ENST00000508573 AUHQ13825 339 aaKnown RBP5.48□□□□□ -1.53
SMARCA5-202ENST00000508573 ZC3H14Q6PJT7 736 aaKnown RBP5.48□□□□□ -1.53
SMARCA5-202ENST00000508573 FRMD5Q7Z6J6 570 aa5.48□□□□□ -1.53
SMARCA5-202ENST00000508573 LILRB2Q8N423 598 aa5.48□□□□□ -1.53
SMARCA5-202ENST00000508573 SH3TC2Q8TF17 1288 aa5.48□□□□□ -1.53
SMARCA5-202ENST00000508573 CEP89Q96ST8 783 aa5.48□□□□□ -1.53
SMARCA5-202ENST00000508573 BDH2Q9BUT1 245 aa5.48□□□□□ -1.53
SMARCA5-202ENST00000508573 LRRC3Q9BY71 257 aa5.48□□□□□ -1.53
SMARCA5-202ENST00000508573 ARNT2Q9HBZ2 717 aa5.48□□□□□ -1.53
SMARCA5-202ENST00000508573 SIRPGQ9P1W8 387 aa5.48□□□□□ -1.53
SMARCA5-202ENST00000508573 FFAR3O14843 346 aa5.47□□□□□ -1.53
SMARCA5-202ENST00000508573 GSTM1P09488 218 aa5.47□□□□□ -1.53
SMARCA5-202ENST00000508573 NME1P15531 152 aaKnown RBP5.47□□□□□ -1.53
SMARCA5-202ENST00000508573 PFKLP17858 780 aa5.47□□□□□ -1.53
SMARCA5-202ENST00000508573 CEBPAP49715 358 aaPredicted RBP5.47□□□□□ -1.53
SMARCA5-202ENST00000508573 CDKN1CP49918 316 aaPredicted RBP5.47□□□□□ -1.53
SMARCA5-202ENST00000508573 NR1I3Q14994 352 aa5.47□□□□□ -1.53
SMARCA5-202ENST00000508573 VPS72Q15906 364 aa5.47□□□□□ -1.53
SMARCA5-202ENST00000508573 NFE2Q16621 373 aaPredicted RBP5.47□□□□□ -1.53
SMARCA5-202ENST00000508573 BRDTQ58F21 947 aaPredicted RBP5.47□□□□□ -1.53
SMARCA5-202ENST00000508573 ZNF280DQ6N043 979 aa5.47□□□□□ -1.53
SMARCA5-202ENST00000508573 CRTC3Q6UUV7 619 aa5.47□□□□□ -1.53
SMARCA5-202ENST00000508573 ERMP1Q7Z2K6 904 aa5.47□□□□□ -1.53
SMARCA5-202ENST00000508573 LSRQ86X29 649 aaPredicted RBP5.47□□□□□ -1.53
SMARCA5-202ENST00000508573 JAMLQ86YT9 394 aa5.47□□□□□ -1.53
SMARCA5-202ENST00000508573 SAMD3Q8N6K7 520 aa5.47□□□□□ -1.53
SMARCA5-202ENST00000508573 NAT16Q8N8M0 369 aa5.47□□□□□ -1.53
SMARCA5-202ENST00000508573 EAF1Q96JC9 268 aaPredicted RBP5.47□□□□□ -1.53
SMARCA5-202ENST00000508573 SLC6A18Q96N87 628 aa5.47□□□□□ -1.53
SMARCA5-202ENST00000508573 NAP1L4Q99733 375 aaKnown RBP5.47□□□□□ -1.53
SMARCA5-202ENST00000508573 DSCC1Q9BVC3 393 aa5.47□□□□□ -1.53
SMARCA5-202ENST00000508573 ZNF408Q9H9D4 720 aa5.47□□□□□ -1.53
SMARCA5-202ENST00000508573 TNFRSF12AQ9NP84 129 aa5.47□□□□□ -1.53
SMARCA5-202ENST00000508573 CASS4Q9NQ75 786 aa5.47□□□□□ -1.53
SMARCA5-202ENST00000508573 IRS2Q9Y4H2 1338 aa5.47□□□□□ -1.53
SMARCA5-202ENST00000508573 ESYT3A0FGR9 886 aa5.46□□□□□ -1.54
SMARCA5-202ENST00000508573 FAM86C2PA6NEL3 165 aa5.46□□□□□ -1.54
SMARCA5-202ENST00000508573 TSPAN6O43657 245 aa5.46□□□□□ -1.54
SMARCA5-202ENST00000508573 PRICKLE3O43900 615 aaPredicted RBP5.46□□□□□ -1.54
SMARCA5-202ENST00000508573 CAND2O75155 1236 aa5.46□□□□□ -1.54
SMARCA5-202ENST00000508573 MSL3P1P0C860 447 aa5.46□□□□□ -1.54
SMARCA5-202ENST00000508573 MAPKAPK2P49137 400 aa5.46□□□□□ -1.54
SMARCA5-202ENST00000508573 SLURP1P55000 103 aa5.46□□□□□ -1.54
SMARCA5-202ENST00000508573 ZNF200P98182 395 aaPredicted RBP5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms