RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 TMEM67Q5HYA8 995 aa25.63■■□□□ 1.69
LSM6-203ENST00000503982 FAM109BQ6ICB4 259 aaPredicted RBP25.63■■□□□ 1.69
LSM6-203ENST00000503982 SEPT14Q6ZU15 432 aa25.63■■□□□ 1.69
LSM6-203ENST00000503982 CENPQQ7L2Z9 268 aaPredicted RBP25.63■■□□□ 1.69
LSM6-203ENST00000503982 TRPV6Q9H1D0 765 aa25.63■■□□□ 1.69
LSM6-203ENST00000503982 HIPK3Q9H422 1215 aa25.63■■□□□ 1.69
LSM6-203ENST00000503982 STXBP5LQ9Y2K9 1186 aa25.63■■□□□ 1.69
LSM6-203ENST00000503982 RBM8AQ9Y5S9 174 aaKnown RBP25.63■■□□□ 1.69
LSM6-203ENST00000503982 CD4P01730 458 aa25.62■■□□□ 1.69
LSM6-203ENST00000503982 ACRP10323 421 aa25.62■■□□□ 1.69
LSM6-203ENST00000503982 CSF2RAP15509 400 aa25.62■■□□□ 1.69
LSM6-203ENST00000503982 SMAD3P84022 425 aaKnown RBP25.62■■□□□ 1.69
LSM6-203ENST00000503982 STXBP2Q15833 593 aa25.62■■□□□ 1.69
LSM6-203ENST00000503982 CATIPQ7Z7H3 387 aa25.62■■□□□ 1.69
LSM6-203ENST00000503982 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.62■■□□□ 1.69
LSM6-203ENST00000503982 MTG1Q9BT17 334 aaPredicted RBP25.62■■□□□ 1.69
LSM6-203ENST00000503982 ZBTB5O15062 677 aa25.61■■□□□ 1.69
LSM6-203ENST00000503982 GRM4Q14833 912 aa25.61■■□□□ 1.69
LSM6-203ENST00000503982 SLC43A3Q8NBI5 491 aa25.61■■□□□ 1.69
LSM6-203ENST00000503982 MAF1Q9H063 256 aa25.61■■□□□ 1.69
LSM6-203ENST00000503982 PCDHA1Q9Y5I3 950 aa25.61■■□□□ 1.69
LSM6-203ENST00000503982 TAF6LQ9Y6J9 622 aa25.61■■□□□ 1.69
LSM6-203ENST00000503982 MYH7BA7E2Y1 1941 aa25.61■■□□□ 1.69
LSM6-203ENST00000503982 PALM3A6NDB9 673 aaPredicted RBP25.6■■□□□ 1.69
LSM6-203ENST00000503982 B4GALT4O60513 344 aa25.6■■□□□ 1.69
LSM6-203ENST00000503982 CCL23P55773 120 aa25.6■■□□□ 1.69
LSM6-203ENST00000503982 CASC1Q6TDU7 716 aa25.6■■□□□ 1.69
LSM6-203ENST00000503982 STOX1Q6ZVD7 989 aa25.6■■□□□ 1.69
LSM6-203ENST00000503982 PIBF1Q8WXW3 757 aa25.6■■□□□ 1.69
LSM6-203ENST00000503982 MAP4K1Q92918 833 aa25.6■■□□□ 1.69
LSM6-203ENST00000503982 IWS1Q96ST2 819 aa25.6■■□□□ 1.69
LSM6-203ENST00000503982 SENP2Q9HC62 589 aa25.6■■□□□ 1.69
LSM6-203ENST00000503982 COL20A1Q9P218 1284 aa25.6■■□□□ 1.69
LSM6-203ENST00000503982 GRIN2DO15399 1336 aa25.6■■□□□ 1.69
LSM6-203ENST00000503982 PURAQ00577 322 aaKnown RBP25.59■■□□□ 1.69
LSM6-203ENST00000503982 TRAF1Q13077 416 aa25.59■■□□□ 1.69
LSM6-203ENST00000503982 PSRC1Q6PGN9 363 aaPredicted RBP25.59■■□□□ 1.69
LSM6-203ENST00000503982 PIGSQ96S52 555 aa25.59■■□□□ 1.69
LSM6-203ENST00000503982 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.58■■□□□ 1.69
LSM6-203ENST00000503982 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.58■■□□□ 1.69
LSM6-203ENST00000503982 KPNA6O60684 536 aa25.58■■□□□ 1.69
LSM6-203ENST00000503982 ARIH2O95376 493 aa25.58■■□□□ 1.69
LSM6-203ENST00000503982 MYCLP12524 364 aaPredicted RBP25.58■■□□□ 1.69
LSM6-203ENST00000503982 LY6KQ17RY6 165 aa25.58■■□□□ 1.69
LSM6-203ENST00000503982 NFXL1Q6ZNB6 911 aa25.58■■□□□ 1.69
LSM6-203ENST00000503982 GUCD1Q96NT3 240 aa25.58■■□□□ 1.69
LSM6-203ENST00000503982 ALDH8A1Q9H2A2 487 aaPredicted RBP25.58■■□□□ 1.69
LSM6-203ENST00000503982 PXMP2Q9NR77 195 aa25.58■■□□□ 1.69
LSM6-203ENST00000503982 UMODL1Q5DID0 1318 aa25.58■■□□□ 1.69
LSM6-203ENST00000503982 LAMA2P24043 3122 aaKnown RBP25.57■■□□□ 1.68
LSM6-203ENST00000503982 GH1P01241 217 aa25.57■■□□□ 1.68
LSM6-203ENST00000503982 SUPT20HL2P0C7V6 817 aa25.57■■□□□ 1.68
LSM6-203ENST00000503982 TMEM240Q5SV17 173 aa25.57■■□□□ 1.68
LSM6-203ENST00000503982 ZNF365Q70YC5 407 aa25.57■■□□□ 1.68
LSM6-203ENST00000503982 PPP1R13LQ8WUF5 828 aa25.57■■□□□ 1.68
LSM6-203ENST00000503982 SEMA6BQ9H3T3 888 aa25.57■■□□□ 1.68
LSM6-203ENST00000503982 IL23AQ9NPF7 189 aa25.57■■□□□ 1.68
LSM6-203ENST00000503982 ANO2Q9NQ90 1003 aa25.57■■□□□ 1.68
LSM6-203ENST00000503982 TRMT13Q9NUP7 481 aaKnown RBP25.57■■□□□ 1.68
LSM6-203ENST00000503982 NOD1Q9Y239 953 aa25.57■■□□□ 1.68
LSM6-203ENST00000503982 PPP1R11O60927 126 aaPredicted RBP25.56■■□□□ 1.68
LSM6-203ENST00000503982 NR3C2P08235 984 aa25.56■■□□□ 1.68
LSM6-203ENST00000503982 HOXA13P31271 388 aaPredicted RBP25.56■■□□□ 1.68
LSM6-203ENST00000503982 NBPF20Q3BBV1 942 aa25.56■■□□□ 1.68
LSM6-203ENST00000503982 MB21D2Q8IYB1 491 aaPredicted RBP25.56■■□□□ 1.68
LSM6-203ENST00000503982 CTCFLQ8NI51 663 aaPredicted RBP25.56■■□□□ 1.68
LSM6-203ENST00000503982 MTIF3Q9H2K0 278 aaKnown RBP25.56■■□□□ 1.68
LSM6-203ENST00000503982 MRVI1Q9Y6F6 885 aa25.56■■□□□ 1.68
LSM6-203ENST00000503982 SCN10AQ9Y5Y9 1956 aa25.55■■□□□ 1.68
LSM6-203ENST00000503982 PRC1O43663 620 aa25.55■■□□□ 1.68
LSM6-203ENST00000503982 CYP2C9P11712 490 aa25.55■■□□□ 1.68
LSM6-203ENST00000503982 FCHSD1Q86WN1 690 aa25.55■■□□□ 1.68
LSM6-203ENST00000503982 AFG1LQ8WV93 481 aa25.55■■□□□ 1.68
LSM6-203ENST00000503982 MTMR8Q96EF0 704 aa25.55■■□□□ 1.68
LSM6-203ENST00000503982 ESYT1Q9BSJ8 1104 aa25.55■■□□□ 1.68
LSM6-203ENST00000503982 NOC4LQ9BVI4 516 aaKnown RBP25.55■■□□□ 1.68
LSM6-203ENST00000503982 A6NJR5 290 aa25.54■■□□□ 1.68
LSM6-203ENST00000503982 GCOM1H8Y6P7 765 aaPredicted RBP25.54■■□□□ 1.68
LSM6-203ENST00000503982 EIF3JO75822 258 aaKnown RBP25.54■■□□□ 1.68
LSM6-203ENST00000503982 FGBP02675 491 aa25.54■■□□□ 1.68
LSM6-203ENST00000503982 POLR2MP0CAP2 368 aa25.54■■□□□ 1.68
LSM6-203ENST00000503982 HSD17B4P51659 736 aa25.54■■□□□ 1.68
LSM6-203ENST00000503982 ANTXR2P58335 489 aa25.54■■□□□ 1.68
LSM6-203ENST00000503982 SCLYQ96I15 445 aa25.54■■□□□ 1.68
LSM6-203ENST00000503982 CCDC136Q96JN2 1154 aa25.54■■□□□ 1.68
LSM6-203ENST00000503982 MYL10Q9BUA6 226 aa25.54■■□□□ 1.68
LSM6-203ENST00000503982 RIOX1Q9H6W3 641 aa25.54■■□□□ 1.68
LSM6-203ENST00000503982 PPP4R2Q9NY27 417 aa25.54■■□□□ 1.68
LSM6-203ENST00000503982 PNMA6FA0A0J9YX94 578 aa25.53■■□□□ 1.68
LSM6-203ENST00000503982 CCDC69A6NI79 296 aa25.53■■□□□ 1.68
LSM6-203ENST00000503982 MCM5P33992 734 aa25.53■■□□□ 1.68
LSM6-203ENST00000503982 TROAPQ12815 778 aa25.53■■□□□ 1.68
LSM6-203ENST00000503982 C16orf59Q7L2K0 433 aa25.53■■□□□ 1.68
LSM6-203ENST00000503982 RPUSD2Q8IZ73 545 aaKnown RBP25.53■■□□□ 1.68
LSM6-203ENST00000503982 ZNF654Q8IZM8 581 aa25.53■■□□□ 1.68
LSM6-203ENST00000503982 IGDCC4Q8TDY8 1250 aa25.53■■□□□ 1.68
LSM6-203ENST00000503982 CDX2Q99626 313 aaPredicted RBP25.53■■□□□ 1.68
LSM6-203ENST00000503982 LSG1Q9H089 658 aaKnown RBP25.53■■□□□ 1.68
LSM6-203ENST00000503982 MAP3K20Q9NYL2 800 aaKnown RBP25.53■■□□□ 1.68
LSM6-203ENST00000503982 OPLAHO14841 1288 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms