RNA–Protein interactions for RNA: ENST00000496810.1

COL20A1-208, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 723 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-208ENST00000496810 RAB11FIP4Q86YS3 637 aa22.69■■□□□ 1.22
COL20A1-208ENST00000496810 CCDC136Q96JN2 1154 aa22.69■■□□□ 1.22
COL20A1-208ENST00000496810 DCDC2CA8MYV0 355 aa22.68■■□□□ 1.22
COL20A1-208ENST00000496810 EIF2AK2P19525 551 aaKnown RBP22.68■■□□□ 1.22
COL20A1-208ENST00000496810 HOXA13P31271 388 aaPredicted RBP22.68■■□□□ 1.22
COL20A1-208ENST00000496810 HSD17B4P51659 736 aa22.68■■□□□ 1.22
COL20A1-208ENST00000496810 PPP2R5BQ15173 497 aa22.68■■□□□ 1.22
COL20A1-208ENST00000496810 Q7L0L9 218 aa22.68■■□□□ 1.22
COL20A1-208ENST00000496810 CATIPQ7Z7H3 387 aa22.68■■□□□ 1.22
COL20A1-208ENST00000496810 OR6J1Q8NGC5 347 aa22.68■■□□□ 1.22
COL20A1-208ENST00000496810 PPP1R13LQ8WUF5 828 aa22.68■■□□□ 1.22
COL20A1-208ENST00000496810 RMDN3Q96TC7 470 aa22.68■■□□□ 1.22
COL20A1-208ENST00000496810 Q9Y3F1 56 aa22.68■■□□□ 1.22
COL20A1-208ENST00000496810 PCDHA1Q9Y5I3 950 aa22.68■■□□□ 1.22
COL20A1-208ENST00000496810 DOCK5Q9H7D0 1870 aa22.68■■□□□ 1.22
COL20A1-208ENST00000496810 CDC45O75419 566 aa22.67■■□□□ 1.22
COL20A1-208ENST00000496810 RAG1P15918 1043 aa22.67■■□□□ 1.22
COL20A1-208ENST00000496810 GHRHRQ02643 423 aa22.67■■□□□ 1.22
COL20A1-208ENST00000496810 MCF2L2Q86YR7 1114 aa22.67■■□□□ 1.22
COL20A1-208ENST00000496810 SLC43A3Q8NBI5 491 aa22.67■■□□□ 1.22
COL20A1-208ENST00000496810 IL31RAQ8NI17 732 aa22.67■■□□□ 1.22
COL20A1-208ENST00000496810 SCFD2Q8WU76 684 aa22.67■■□□□ 1.22
COL20A1-208ENST00000496810 PXMP2Q9NR77 195 aa22.67■■□□□ 1.22
COL20A1-208ENST00000496810 MROH7Q68CQ1 1323 aa22.66■■□□□ 1.22
COL20A1-208ENST00000496810 PLEKHA8P1O95397 391 aa22.66■■□□□ 1.22
COL20A1-208ENST00000496810 MCM5P33992 734 aa22.66■■□□□ 1.22
COL20A1-208ENST00000496810 ITGA7Q13683 1181 aa22.66■■□□□ 1.22
COL20A1-208ENST00000496810 CASC1Q6TDU7 716 aa22.66■■□□□ 1.22
COL20A1-208ENST00000496810 RASEFQ8IZ41 740 aa22.66■■□□□ 1.22
COL20A1-208ENST00000496810 NSUN6Q8TEA1 469 aaKnown RBP22.66■■□□□ 1.22
COL20A1-208ENST00000496810 TCEANC2Q96MN5 208 aa22.66■■□□□ 1.22
COL20A1-208ENST00000496810 DDAH1O94760 285 aa22.65■■□□□ 1.22
COL20A1-208ENST00000496810 CD4P01730 458 aa22.65■■□□□ 1.22
COL20A1-208ENST00000496810 TXNP10599 105 aaKnown RBP22.65■■□□□ 1.22
COL20A1-208ENST00000496810 CCDC62Q6P9F0 684 aa22.65■■□□□ 1.22
COL20A1-208ENST00000496810 SEPT14Q6ZU15 432 aa22.65■■□□□ 1.22
COL20A1-208ENST00000496810 CMTR1Q8N1G2 835 aaKnown RBP22.65■■□□□ 1.22
COL20A1-208ENST00000496810 PPP1R12CQ9BZL4 782 aa22.65■■□□□ 1.22
COL20A1-208ENST00000496810 UMODL1Q5DID0 1318 aa22.64■■□□□ 1.22
COL20A1-208ENST00000496810 MYL3P08590 195 aa22.64■■□□□ 1.21
COL20A1-208ENST00000496810 PURAQ00577 322 aaKnown RBP22.64■■□□□ 1.21
COL20A1-208ENST00000496810 ARHGEF16Q5VV41 709 aa22.64■■□□□ 1.21
COL20A1-208ENST00000496810 MPHOSPH6Q99547 160 aaKnown RBP22.64■■□□□ 1.21
COL20A1-208ENST00000496810 TRPV6Q9H1D0 765 aa22.64■■□□□ 1.21
COL20A1-208ENST00000496810 SCN5AQ14524 2016 aa22.64■■□□□ 1.21
COL20A1-208ENST00000496810 TANC1Q9C0D5 1861 aa22.63■■□□□ 1.21
COL20A1-208ENST00000496810 PNMA6FA0A0J9YX94 578 aa22.63■■□□□ 1.21
COL20A1-208ENST00000496810 B4GALT4O60513 344 aa22.63■■□□□ 1.21
COL20A1-208ENST00000496810 CABYRO75952 493 aa22.63■■□□□ 1.21
COL20A1-208ENST00000496810 TIMP1P01033 207 aa22.63■■□□□ 1.21
COL20A1-208ENST00000496810 LY6KQ17RY6 165 aa22.63■■□□□ 1.21
COL20A1-208ENST00000496810 ADCK5Q3MIX3 580 aa22.63■■□□□ 1.21
COL20A1-208ENST00000496810 NFXL1Q6ZNB6 911 aa22.63■■□□□ 1.21
COL20A1-208ENST00000496810 ZFP91Q96JP5 570 aaPredicted RBP22.63■■□□□ 1.21
COL20A1-208ENST00000496810 TMEM87BQ96K49 555 aa22.63■■□□□ 1.21
COL20A1-208ENST00000496810 MAF1Q9H063 256 aa22.63■■□□□ 1.21
COL20A1-208ENST00000496810 ZEB2O60315 1214 aa22.62■■□□□ 1.21
COL20A1-208ENST00000496810 RGS20O76081 388 aa22.62■■□□□ 1.21
COL20A1-208ENST00000496810 NR3C2P08235 984 aa22.62■■□□□ 1.21
COL20A1-208ENST00000496810 CPT1AP50416 773 aa22.62■■□□□ 1.21
COL20A1-208ENST00000496810 FPGSQ05932 587 aa22.62■■□□□ 1.21
COL20A1-208ENST00000496810 ARHGAP1Q07960 439 aa22.62■■□□□ 1.21
COL20A1-208ENST00000496810 TTLL4Q14679 1199 aa22.62■■□□□ 1.21
COL20A1-208ENST00000496810 SRBD1Q8N5C6 995 aaKnown RBP22.62■■□□□ 1.21
COL20A1-208ENST00000496810 CTCFLQ8NI51 663 aaPredicted RBP22.62■■□□□ 1.21
COL20A1-208ENST00000496810 IWS1Q96ST2 819 aa22.62■■□□□ 1.21
COL20A1-208ENST00000496810 PDCD2LQ9BRP1 358 aa22.62■■□□□ 1.21
COL20A1-208ENST00000496810 MTA3Q9BTC8 594 aa22.62■■□□□ 1.21
COL20A1-208ENST00000496810 SPZ1Q9BXG8 430 aa22.62■■□□□ 1.21
COL20A1-208ENST00000496810 CCDC69A6NI79 296 aa22.61■■□□□ 1.21
COL20A1-208ENST00000496810 A6NJR5 290 aa22.61■■□□□ 1.21
COL20A1-208ENST00000496810 NKRFO15226 690 aaKnown RBP eCLIP22.61■■□□□ 1.21
COL20A1-208ENST00000496810 CYP2C18P33260 490 aa22.61■■□□□ 1.21
COL20A1-208ENST00000496810 STXBP2Q15833 593 aa22.61■■□□□ 1.21
COL20A1-208ENST00000496810 AFG1LQ8WV93 481 aa22.61■■□□□ 1.21
COL20A1-208ENST00000496810 MAP3K14Q99558 947 aa22.61■■□□□ 1.21
COL20A1-208ENST00000496810 TRMT13Q9NUP7 481 aaKnown RBP22.61■■□□□ 1.21
COL20A1-208ENST00000496810 UNC80Q8N2C7 3258 aa22.6■■□□□ 1.21
COL20A1-208ENST00000496810 GBF1Q92538 1859 aa22.6■■□□□ 1.21
COL20A1-208ENST00000496810 hCG_1642624A0A1W2PR95 340 aa22.6■■□□□ 1.21
COL20A1-208ENST00000496810 B4DLN1 442 aa22.6■■□□□ 1.21
COL20A1-208ENST00000496810 MYCLP12524 364 aaPredicted RBP22.6■■□□□ 1.21
COL20A1-208ENST00000496810 LIFRP42702 1097 aa22.6■■□□□ 1.21
COL20A1-208ENST00000496810 MRPL12P52815 198 aaKnown RBP22.6■■□□□ 1.21
COL20A1-208ENST00000496810 PGM5Q15124 567 aa22.6■■□□□ 1.21
COL20A1-208ENST00000496810 FCHSD1Q86WN1 690 aa22.6■■□□□ 1.21
COL20A1-208ENST00000496810 MICU3Q86XE3 530 aa22.6■■□□□ 1.21
COL20A1-208ENST00000496810 DEFB123Q8N688 67 aa22.6■■□□□ 1.21
COL20A1-208ENST00000496810 POLR3EQ9NVU0 708 aa22.6■■□□□ 1.21
COL20A1-208ENST00000496810 CHD9Q3L8U1 2897 aa22.6■■□□□ 1.21
COL20A1-208ENST00000496810 GCOM1H8Y6P7 765 aaPredicted RBP22.59■■□□□ 1.21
COL20A1-208ENST00000496810 TLR3O15455 904 aaKnown RBP22.59■■□□□ 1.21
COL20A1-208ENST00000496810 SORBS3O60504 671 aa22.59■■□□□ 1.21
COL20A1-208ENST00000496810 POLR2MP0CAP2 368 aa22.59■■□□□ 1.21
COL20A1-208ENST00000496810 CSF2RAP15509 400 aa22.59■■□□□ 1.21
COL20A1-208ENST00000496810 KIF5BP33176 963 aa22.59■■□□□ 1.21
COL20A1-208ENST00000496810 MFSD5Q6N075 450 aa22.59■■□□□ 1.21
COL20A1-208ENST00000496810 C16orf59Q7L2K0 433 aa22.59■■□□□ 1.21
COL20A1-208ENST00000496810 GPKOWQ92917 476 aaPredicted RBP eCLIP22.59■■□□□ 1.21
COL20A1-208ENST00000496810 MTG1Q9BT17 334 aaPredicted RBP22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms