RNA–Protein interactions for RNA: ENST00000494582.1

LINC00488-201, long intergenic non-protein coding RNA 488, humanhuman

TSL 1 (best) BASIC

Gene LINC00488, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00488-201ENST00000494582 TMEM87BQ96K49 555 aa11.19□□□□□ -0.62
LINC00488-201ENST00000494582 DUSP9Q99956 384 aaKnown RBP11.19□□□□□ -0.62
LINC00488-201ENST00000494582 PACSIN2Q9UNF0 486 aaPredicted RBP11.19□□□□□ -0.62
LINC00488-201ENST00000494582 MYH7P12883 1935 aa11.19□□□□□ -0.62
LINC00488-201ENST00000494582 ERICH2A1L162 156 aa11.19□□□□□ -0.62
LINC00488-201ENST00000494582 EYA2O00167 538 aa11.19□□□□□ -0.62
LINC00488-201ENST00000494582 MYBP10242 640 aa11.19□□□□□ -0.62
LINC00488-201ENST00000494582 DNM2P50570 870 aa11.19□□□□□ -0.62
LINC00488-201ENST00000494582 MAGOHP61326 146 aaKnown RBP11.19□□□□□ -0.62
LINC00488-201ENST00000494582 RIPK1Q13546 671 aa11.19□□□□□ -0.62
LINC00488-201ENST00000494582 BLMHQ13867 455 aa11.19□□□□□ -0.62
LINC00488-201ENST00000494582 SLC5A9Q2M3M2 681 aa11.19□□□□□ -0.62
LINC00488-201ENST00000494582 FAM133BQ5BKY9 247 aaKnown RBP11.19□□□□□ -0.62
LINC00488-201ENST00000494582 MIIPQ5JXC2 388 aa11.19□□□□□ -0.62
LINC00488-201ENST00000494582 ERICH1Q86X53 443 aa11.19□□□□□ -0.62
LINC00488-201ENST00000494582 C2CD5Q86YS7 1000 aa11.19□□□□□ -0.62
LINC00488-201ENST00000494582 ARFGAP2Q8N6H7 521 aa11.19□□□□□ -0.62
LINC00488-201ENST00000494582 WHAMMQ8TF30 809 aa11.19□□□□□ -0.62
LINC00488-201ENST00000494582 IP6K1Q92551 441 aa11.19□□□□□ -0.62
LINC00488-201ENST00000494582 MAGOHBQ96A72 148 aaKnown RBP11.19□□□□□ -0.62
LINC00488-201ENST00000494582 NLRP3Q96P20 1036 aa11.19□□□□□ -0.62
LINC00488-201ENST00000494582 TUBGCP2Q9BSJ2 902 aa11.19□□□□□ -0.62
LINC00488-201ENST00000494582 UBAC1Q9BSL1 405 aa11.19□□□□□ -0.62
LINC00488-201ENST00000494582 HOMER3Q9NSC5 361 aa11.19□□□□□ -0.62
LINC00488-201ENST00000494582 EXOC1Q9NV70 894 aa11.19□□□□□ -0.62
LINC00488-201ENST00000494582 PCDHGC5Q9Y5F6 944 aa11.19□□□□□ -0.62
LINC00488-201ENST00000494582 EID1Q9Y6B2 187 aa11.19□□□□□ -0.62
LINC00488-201ENST00000494582 LTN1O94822 1766 aa11.19□□□□□ -0.62
LINC00488-201ENST00000494582 NEO1Q92859 1461 aa11.19□□□□□ -0.62
LINC00488-201ENST00000494582 SIPA1L3O60292 1781 aaPredicted RBP11.19□□□□□ -0.62
LINC00488-201ENST00000494582 PKD1L3Q7Z443 1732 aa11.19□□□□□ -0.62
LINC00488-201ENST00000494582 SOS2Q07890 1332 aaPredicted RBP11.19□□□□□ -0.62
LINC00488-201ENST00000494582 ADAMTS3O15072 1205 aa11.18□□□□□ -0.62
LINC00488-201ENST00000494582 FTCDO95954 541 aa11.18□□□□□ -0.62
LINC00488-201ENST00000494582 ZFYP08048 801 aaPredicted RBP11.18□□□□□ -0.62
LINC00488-201ENST00000494582 ALADP13716 330 aa11.18□□□□□ -0.62
LINC00488-201ENST00000494582 EEF1GP26641 437 aaKnown RBP11.18□□□□□ -0.62
LINC00488-201ENST00000494582 CFAP221Q4G0U5 840 aa11.18□□□□□ -0.62
LINC00488-201ENST00000494582 C1orf141Q5JVX7 400 aa11.18□□□□□ -0.62
LINC00488-201ENST00000494582 TTI2Q6NXR4 508 aa11.18□□□□□ -0.62
LINC00488-201ENST00000494582 LRIG3Q6UXM1 1119 aa11.18□□□□□ -0.62
LINC00488-201ENST00000494582 PROSER2Q86WR7 435 aaPredicted RBP11.18□□□□□ -0.62
LINC00488-201ENST00000494582 KLHL7Q8IXQ5 586 aa11.18□□□□□ -0.62
LINC00488-201ENST00000494582 WASF1Q92558 559 aa11.18□□□□□ -0.62
LINC00488-201ENST00000494582 ZCWPW1Q9H0M4 648 aa11.18□□□□□ -0.62
LINC00488-201ENST00000494582 BSDC1Q9NW68 430 aaPredicted RBP11.18□□□□□ -0.62
LINC00488-201ENST00000494582 PLEKHG1Q9ULL1 1385 aa11.18□□□□□ -0.62
LINC00488-201ENST00000494582 USO1O60763 962 aaKnown RBP11.18□□□□□ -0.62
LINC00488-201ENST00000494582 CLSTN1O94985 981 aa11.18□□□□□ -0.62
LINC00488-201ENST00000494582 LIFRP42702 1097 aa11.18□□□□□ -0.62
LINC00488-201ENST00000494582 TUBP50607 506 aa11.18□□□□□ -0.62
LINC00488-201ENST00000494582 ALDH5A1P51649 535 aaPredicted RBP11.18□□□□□ -0.62
LINC00488-201ENST00000494582 RASSF7Q02833 373 aa11.18□□□□□ -0.62
LINC00488-201ENST00000494582 MAP3K12Q12852 859 aa11.18□□□□□ -0.62
LINC00488-201ENST00000494582 PTGDRQ13258 359 aa11.18□□□□□ -0.62
LINC00488-201ENST00000494582 RTN1Q16799 776 aa11.18□□□□□ -0.62
LINC00488-201ENST00000494582 TAX1BP1Q86VP1 789 aa11.18□□□□□ -0.62
LINC00488-201ENST00000494582 CNKSR1Q969H4 720 aa11.18□□□□□ -0.62
LINC00488-201ENST00000494582 TRIM47Q96LD4 638 aa11.18□□□□□ -0.62
LINC00488-201ENST00000494582 PCMTD1Q96MG8 357 aaPredicted RBP11.18□□□□□ -0.62
LINC00488-201ENST00000494582 ZNF317Q96PQ6 595 aaPredicted RBP11.18□□□□□ -0.62
LINC00488-201ENST00000494582 PIDD1Q9HB75 910 aa11.18□□□□□ -0.62
LINC00488-201ENST00000494582 ABCF3Q9NUQ8 709 aa11.18□□□□□ -0.62
LINC00488-201ENST00000494582 NOP53Q9NZM5 478 aaKnown RBP11.18□□□□□ -0.62
LINC00488-201ENST00000494582 GGT7Q9UJ14 662 aa11.18□□□□□ -0.62
LINC00488-201ENST00000494582 THRAP3Q9Y2W1 955 aaKnown RBP11.18□□□□□ -0.62
LINC00488-201ENST00000494582 GOLGA6L10A6NI86 522 aa11.17□□□□□ -0.62
LINC00488-201ENST00000494582 DEXIO95424 95 aa11.17□□□□□ -0.62
LINC00488-201ENST00000494582 CTNNA1P35221 906 aaKnown RBP11.17□□□□□ -0.62
LINC00488-201ENST00000494582 SLC1A4P43007 532 aa11.17□□□□□ -0.62
LINC00488-201ENST00000494582 CDK17Q00537 523 aa11.17□□□□□ -0.62
LINC00488-201ENST00000494582 GFPT1Q06210 699 aaPredicted RBP11.17□□□□□ -0.62
LINC00488-201ENST00000494582 TRAF1Q13077 416 aa11.17□□□□□ -0.62
LINC00488-201ENST00000494582 PSMD2Q13200 908 aa11.17□□□□□ -0.62
LINC00488-201ENST00000494582 ZNF268Q14587 947 aaPredicted RBP11.17□□□□□ -0.62
LINC00488-201ENST00000494582 ODF2Q5BJF6 829 aa11.17□□□□□ -0.62
LINC00488-201ENST00000494582 C14orf37Q86TY3 774 aa11.17□□□□□ -0.62
LINC00488-201ENST00000494582 TRIM22Q8IYM9 498 aa11.17□□□□□ -0.62
LINC00488-201ENST00000494582 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.17□□□□□ -0.62
LINC00488-201ENST00000494582 RBM33Q96EV2 1170 aaKnown RBP11.17□□□□□ -0.62
LINC00488-201ENST00000494582 INPP4AQ96PE3 977 aaPredicted RBP11.17□□□□□ -0.62
LINC00488-201ENST00000494582 LRP6O75581 1613 aa11.17□□□□□ -0.62
LINC00488-201ENST00000494582 A0A1B0GVG6 124 aa11.17□□□□□ -0.62
LINC00488-201ENST00000494582 LCA5LO95447 670 aa11.17□□□□□ -0.62
LINC00488-201ENST00000494582 PYGLP06737 847 aa11.17□□□□□ -0.62
LINC00488-201ENST00000494582 FESP07332 822 aa11.17□□□□□ -0.62
LINC00488-201ENST00000494582 MKRN4PQ13434 485 aaPredicted RBP11.17□□□□□ -0.62
LINC00488-201ENST00000494582 HLTFQ14527 1009 aaKnown RBP eCLIP11.17□□□□□ -0.62
LINC00488-201ENST00000494582 ZNF790Q6PG37 636 aa11.17□□□□□ -0.62
LINC00488-201ENST00000494582 CCDC197Q8NCU1 140 aa11.17□□□□□ -0.62
LINC00488-201ENST00000494582 P3H4Q92791 437 aa11.17□□□□□ -0.62
LINC00488-201ENST00000494582 FERMT2Q96AC1 680 aa11.17□□□□□ -0.62
LINC00488-201ENST00000494582 CHMP6Q96FZ7 201 aa11.17□□□□□ -0.62
LINC00488-201ENST00000494582 ALS2CR12Q96Q35 445 aa11.17□□□□□ -0.62
LINC00488-201ENST00000494582 XPO6Q96QU8 1125 aaKnown RBP11.17□□□□□ -0.62
LINC00488-201ENST00000494582 THAP9Q9H5L6 903 aa11.17□□□□□ -0.62
LINC00488-201ENST00000494582 EPB41L4AQ9HCS5 686 aaPredicted RBP11.17□□□□□ -0.62
LINC00488-201ENST00000494582 FBXL5Q9UKA1 691 aa11.17□□□□□ -0.62
LINC00488-201ENST00000494582 DISP2A7MBM2 1401 aa11.17□□□□□ -0.62
LINC00488-201ENST00000494582 ARHGAP23Q9P227 1491 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms