RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 SPATC1Q76KD6 591 aa5.83□□□□□ -1.48
VTA1-204ENST00000491881 TP53I13Q8NBR0 393 aaPredicted RBP5.83□□□□□ -1.48
VTA1-204ENST00000491881 KDM2BQ8NHM5 1336 aa5.82□□□□□ -1.48
VTA1-204ENST00000491881 H0Y8X5 98 aa5.82□□□□□ -1.48
VTA1-204ENST00000491881 ITGAVP06756 1048 aa5.82□□□□□ -1.48
VTA1-204ENST00000491881 INSRRP14616 1297 aa5.82□□□□□ -1.48
VTA1-204ENST00000491881 POU4F1Q01851 419 aa5.82□□□□□ -1.48
VTA1-204ENST00000491881 RTP5Q14D33 572 aa5.82□□□□□ -1.48
VTA1-204ENST00000491881 ZNF227Q86WZ6 799 aa5.82□□□□□ -1.48
VTA1-204ENST00000491881 NLGN1Q8N2Q7 840 aa5.82□□□□□ -1.48
VTA1-204ENST00000491881 ARHGEF39Q8N4T4 335 aa5.82□□□□□ -1.48
VTA1-204ENST00000491881 NUP43Q8NFH3 380 aa5.82□□□□□ -1.48
VTA1-204ENST00000491881 SGSM3Q96HU1 749 aa5.82□□□□□ -1.48
VTA1-204ENST00000491881 LGR4Q9BXB1 951 aa5.82□□□□□ -1.48
VTA1-204ENST00000491881 TMA7Q9Y2S6 64 aaKnown RBP5.82□□□□□ -1.48
VTA1-204ENST00000491881 EMC9Q9Y3B6 208 aa5.82□□□□□ -1.48
VTA1-204ENST00000491881 DIAPH1O60610 1272 aaKnown RBP5.81□□□□□ -1.48
VTA1-204ENST00000491881 KCNH1O95259 989 aa5.81□□□□□ -1.48
VTA1-204ENST00000491881 ENDOUP21128 410 aaKnown RBP5.81□□□□□ -1.48
VTA1-204ENST00000491881 BMP8BP34820 402 aa5.81□□□□□ -1.48
VTA1-204ENST00000491881 CTSKP43235 329 aa5.81□□□□□ -1.48
VTA1-204ENST00000491881 AMPD2Q01433 879 aa5.81□□□□□ -1.48
VTA1-204ENST00000491881 GRB10Q13322 594 aa5.81□□□□□ -1.48
VTA1-204ENST00000491881 ZNF513Q8N8E2 541 aaPredicted RBP5.81□□□□□ -1.48
VTA1-204ENST00000491881 SPATA9Q9BWV2 254 aa5.81□□□□□ -1.48
VTA1-204ENST00000491881 CDADC1Q9BWV3 514 aa5.81□□□□□ -1.48
VTA1-204ENST00000491881 A0A1W2PQ45 241 aaPredicted RBP5.8□□□□□ -1.48
VTA1-204ENST00000491881 A0A1W2PQU0 124 aa5.8□□□□□ -1.48
VTA1-204ENST00000491881 A0A1W2PQY0 241 aa5.8□□□□□ -1.48
VTA1-204ENST00000491881 FFAR3O14843 346 aa5.8□□□□□ -1.48
VTA1-204ENST00000491881 PRICKLE3O43900 615 aaPredicted RBP5.8□□□□□ -1.48
VTA1-204ENST00000491881 CD3EP07766 207 aa5.8□□□□□ -1.48
VTA1-204ENST00000491881 PFKLP17858 780 aa5.8□□□□□ -1.48
VTA1-204ENST00000491881 NOP2P46087 812 aaKnown RBP5.8□□□□□ -1.48
VTA1-204ENST00000491881 PPP2R2AP63151 447 aa5.8□□□□□ -1.48
VTA1-204ENST00000491881 HSP90AA2PQ14568 343 aaPredicted RBP5.8□□□□□ -1.48
VTA1-204ENST00000491881 PUM1Q14671 1186 aaKnown RBP eCLIP5.8□□□□□ -1.48
VTA1-204ENST00000491881 DPY19L1Q2PZI1 675 aa5.8□□□□□ -1.48
VTA1-204ENST00000491881 GIMAP6Q6P9H5 292 aa5.8□□□□□ -1.48
VTA1-204ENST00000491881 RPTNQ6XPR3 784 aa5.8□□□□□ -1.48
VTA1-204ENST00000491881 SLCO6A1Q86UG4 719 aa5.8□□□□□ -1.48
VTA1-204ENST00000491881 TRIM59Q8IWR1 403 aa5.8□□□□□ -1.48
VTA1-204ENST00000491881 GPR20Q99678 358 aa5.8□□□□□ -1.48
VTA1-204ENST00000491881 TNFRSF12AQ9NP84 129 aa5.8□□□□□ -1.48
VTA1-204ENST00000491881 ERVK13-1Q9NX77 482 aa5.8□□□□□ -1.48
VTA1-204ENST00000491881 STXBP3O00186 592 aa5.79□□□□□ -1.48
VTA1-204ENST00000491881 TBX1O43435 398 aa5.79□□□□□ -1.48
VTA1-204ENST00000491881 VAMP4O75379 141 aa5.79□□□□□ -1.48
VTA1-204ENST00000491881 LIMS1P48059 325 aa5.79□□□□□ -1.48
VTA1-204ENST00000491881 SLURP1P55000 103 aa5.79□□□□□ -1.48
VTA1-204ENST00000491881 CAP1Q01518 475 aa5.79□□□□□ -1.48
VTA1-204ENST00000491881 CBX2Q14781 532 aaPredicted RBP5.79□□□□□ -1.48
VTA1-204ENST00000491881 GTF2IRD2BQ6EKJ0 949 aa5.79□□□□□ -1.48
VTA1-204ENST00000491881 ZC3H14Q6PJT7 736 aaKnown RBP5.79□□□□□ -1.48
VTA1-204ENST00000491881 GTF2IRD2Q86UP8 949 aa5.79□□□□□ -1.48
VTA1-204ENST00000491881 SH3TC2Q8TF17 1288 aa5.79□□□□□ -1.48
VTA1-204ENST00000491881 THAP3Q8WTV1 239 aaPredicted RBP5.79□□□□□ -1.48
VTA1-204ENST00000491881 BTN2A2Q8WVV5 523 aa5.79□□□□□ -1.48
VTA1-204ENST00000491881 MRGPRX3Q96LB0 322 aa5.79□□□□□ -1.48
VTA1-204ENST00000491881 IPO9Q96P70 1041 aaKnown RBP5.79□□□□□ -1.48
VTA1-204ENST00000491881 AARSD1Q9BTE6 412 aaKnown RBP5.79□□□□□ -1.48
VTA1-204ENST00000491881 ACSL6Q9UKU0 697 aa5.79□□□□□ -1.48
VTA1-204ENST00000491881 PALD1Q9ULE6 856 aa5.79□□□□□ -1.48
VTA1-204ENST00000491881 TRAV20A0A0B4J274 112 aa5.78□□□□□ -1.48
VTA1-204ENST00000491881 A0A1W2PQ27 194 aa5.78□□□□□ -1.48
VTA1-204ENST00000491881 A0A1W2PQ64 194 aa5.78□□□□□ -1.48
VTA1-204ENST00000491881 A0A1W2PQC6 194 aa5.78□□□□□ -1.48
VTA1-204ENST00000491881 A0A1W2PQD8 194 aa5.78□□□□□ -1.48
VTA1-204ENST00000491881 K7ESM1 405 aa5.78□□□□□ -1.48
VTA1-204ENST00000491881 ZNF205O95201 554 aa5.78□□□□□ -1.48
VTA1-204ENST00000491881 SNRPB2P08579 225 aaKnown RBP5.78□□□□□ -1.48
VTA1-204ENST00000491881 GSTM1P09488 218 aa5.78□□□□□ -1.48
VTA1-204ENST00000491881 VAV1P15498 845 aa5.78□□□□□ -1.48
VTA1-204ENST00000491881 KCNJ6P48051 423 aa5.78□□□□□ -1.48
VTA1-204ENST00000491881 ZNF200P98182 395 aaPredicted RBP5.78□□□□□ -1.48
VTA1-204ENST00000491881 NR1I3Q14994 352 aa5.78□□□□□ -1.48
VTA1-204ENST00000491881 PLEKHN1Q494U1 663 aaPredicted RBP5.78□□□□□ -1.48
VTA1-204ENST00000491881 C2orf27AQ580R0 203 aa5.78□□□□□ -1.48
VTA1-204ENST00000491881 UBXN11Q5T124 520 aa5.78□□□□□ -1.48
VTA1-204ENST00000491881 HHIPL2Q6UWX4 724 aa5.78□□□□□ -1.48
VTA1-204ENST00000491881 LILRB2Q8N423 598 aa5.78□□□□□ -1.48
VTA1-204ENST00000491881 CDC6Q99741 560 aa5.78□□□□□ -1.48
VTA1-204ENST00000491881 USP40Q9NVE5 1235 aa5.78□□□□□ -1.48
VTA1-204ENST00000491881 IMPACTQ9P2X3 320 aa5.78□□□□□ -1.48
VTA1-204ENST00000491881 MYRFQ9Y2G1 1151 aa5.78□□□□□ -1.48
VTA1-204ENST00000491881 MRPL42Q9Y6G3 142 aaKnown RBP5.78□□□□□ -1.48
VTA1-204ENST00000491881 TLDC2A0PJX2 215 aa5.77□□□□□ -1.49
VTA1-204ENST00000491881 SMARCA5O60264 1052 aaPredicted RBP5.77□□□□□ -1.49
VTA1-204ENST00000491881 IGFBP6P24592 240 aaPredicted RBP5.77□□□□□ -1.49
VTA1-204ENST00000491881 MAPKAPK2P49137 400 aa5.77□□□□□ -1.49
VTA1-204ENST00000491881 SEPHS1P49903 392 aa5.77□□□□□ -1.49
VTA1-204ENST00000491881 LONRF2Q1L5Z9 754 aa5.77□□□□□ -1.49
VTA1-204ENST00000491881 ZFYVE27Q5T4F4 411 aa5.77□□□□□ -1.49
VTA1-204ENST00000491881 JAZF1Q86VZ6 243 aa5.77□□□□□ -1.49
VTA1-204ENST00000491881 NAT16Q8N8M0 369 aa5.77□□□□□ -1.49
VTA1-204ENST00000491881 ZBTB38Q8NAP3 1195 aaPredicted RBP5.77□□□□□ -1.49
VTA1-204ENST00000491881 ZSWIM2Q8NEG5 633 aa5.77□□□□□ -1.49
VTA1-204ENST00000491881 CCDC140Q96MF4 163 aa5.77□□□□□ -1.49
VTA1-204ENST00000491881 IER2Q9BTL4 223 aa5.77□□□□□ -1.49
VTA1-204ENST00000491881 SLC12A9Q9BXP2 914 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms