RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 ID3Q02535 119 aa10.08□□□□□ -0.8
TRAPPC12-221ENST00000489032 APOBRQ0VD83 1088 aa10.08□□□□□ -0.8
TRAPPC12-221ENST00000489032 PAK2Q13177 524 aa10.08□□□□□ -0.8
TRAPPC12-221ENST00000489032 CWF19L2Q2TBE0 894 aaKnown RBP10.08□□□□□ -0.8
TRAPPC12-221ENST00000489032 HABP4Q5JVS0 413 aaKnown RBP10.08□□□□□ -0.8
TRAPPC12-221ENST00000489032 PRR5LQ6MZQ0 368 aa10.08□□□□□ -0.8
TRAPPC12-221ENST00000489032 G2E3Q7L622 706 aa10.08□□□□□ -0.8
TRAPPC12-221ENST00000489032 ZNF34Q8IZ26 560 aa10.08□□□□□ -0.8
TRAPPC12-221ENST00000489032 PI4KAP1Q8N8J0 262 aa10.08□□□□□ -0.8
TRAPPC12-221ENST00000489032 WFDC12Q8WWY7 111 aa10.08□□□□□ -0.8
TRAPPC12-221ENST00000489032 SSH1Q8WYL5 1049 aa10.08□□□□□ -0.8
TRAPPC12-221ENST00000489032 GAL3ST3Q96A11 431 aa10.08□□□□□ -0.8
TRAPPC12-221ENST00000489032 SPATA32Q96LK8 384 aa10.08□□□□□ -0.8
TRAPPC12-221ENST00000489032 MYD88Q99836 296 aa10.08□□□□□ -0.8
TRAPPC12-221ENST00000489032 METTL22Q9BUU2 404 aaPredicted RBP10.08□□□□□ -0.8
TRAPPC12-221ENST00000489032 UTP14AQ9BVJ6 771 aaKnown RBP10.08□□□□□ -0.8
TRAPPC12-221ENST00000489032 NT5C1AQ9BXI3 368 aa10.08□□□□□ -0.8
TRAPPC12-221ENST00000489032 SUGCTQ9HAC7 445 aa10.08□□□□□ -0.8
TRAPPC12-221ENST00000489032 ZNF277Q9NRM2 450 aaPredicted RBP10.08□□□□□ -0.8
TRAPPC12-221ENST00000489032 MAP3K2Q9Y2U5 619 aa10.08□□□□□ -0.8
TRAPPC12-221ENST00000489032 SNCAIPQ9Y6H5 919 aa10.08□□□□□ -0.8
TRAPPC12-221ENST00000489032 SYNGAP1Q96PV0 1343 aa10.07□□□□□ -0.8
TRAPPC12-221ENST00000489032 NUP98P52948 1817 aa10.07□□□□□ -0.8
TRAPPC12-221ENST00000489032 TRAF5O00463 557 aa10.07□□□□□ -0.8
TRAPPC12-221ENST00000489032 GAS2O43903 313 aaKnown RBP10.07□□□□□ -0.8
TRAPPC12-221ENST00000489032 HSP90B1P14625 803 aaKnown RBP10.07□□□□□ -0.8
TRAPPC12-221ENST00000489032 RPL6Q02878 288 aaKnown RBP10.07□□□□□ -0.8
TRAPPC12-221ENST00000489032 MPP2Q14168 576 aa10.07□□□□□ -0.8
TRAPPC12-221ENST00000489032 DYMQ7RTS9 669 aa10.07□□□□□ -0.8
TRAPPC12-221ENST00000489032 SAPCD2Q86UD0 394 aa10.07□□□□□ -0.8
TRAPPC12-221ENST00000489032 DNAAF4Q8WXU2 420 aa10.07□□□□□ -0.8
TRAPPC12-221ENST00000489032 NKD1Q969G9 470 aa10.07□□□□□ -0.8
TRAPPC12-221ENST00000489032 GPRASP2Q96D09 838 aa10.07□□□□□ -0.8
TRAPPC12-221ENST00000489032 PTPRCP08575 1304 aa10.07□□□□□ -0.8
TRAPPC12-221ENST00000489032 IBTKQ9P2D0 1353 aaPredicted RBP10.06□□□□□ -0.8
TRAPPC12-221ENST00000489032 DCDC2CA8MYV0 355 aa10.06□□□□□ -0.8
TRAPPC12-221ENST00000489032 IPO8O15397 1037 aaKnown RBP10.06□□□□□ -0.8
TRAPPC12-221ENST00000489032 TLR3O15455 904 aaKnown RBP10.06□□□□□ -0.8
TRAPPC12-221ENST00000489032 GREM1O60565 184 aa10.06□□□□□ -0.8
TRAPPC12-221ENST00000489032 RARSP54136 660 aaKnown RBP10.06□□□□□ -0.8
TRAPPC12-221ENST00000489032 PTPN11Q06124 597 aaPredicted RBP10.06□□□□□ -0.8
TRAPPC12-221ENST00000489032 SOX4Q06945 474 aaPredicted RBP10.06□□□□□ -0.8
TRAPPC12-221ENST00000489032 NOGQ13253 232 aa10.06□□□□□ -0.8
TRAPPC12-221ENST00000489032 NAALADL2Q58DX5 795 aa10.06□□□□□ -0.8
TRAPPC12-221ENST00000489032 WIPI1Q5MNZ9 446 aaPredicted RBP10.06□□□□□ -0.8
TRAPPC12-221ENST00000489032 SUSD4Q5VX71 490 aa10.06□□□□□ -0.8
TRAPPC12-221ENST00000489032 USP50Q70EL3 339 aaPredicted RBP10.06□□□□□ -0.8
TRAPPC12-221ENST00000489032 NLRP10Q86W26 655 aa10.06□□□□□ -0.8
TRAPPC12-221ENST00000489032 RTKN2Q8IZC4 609 aa10.06□□□□□ -0.8
TRAPPC12-221ENST00000489032 CCDC191Q8NCU4 936 aa10.06□□□□□ -0.8
TRAPPC12-221ENST00000489032 JDP2Q8WYK2 163 aa10.06□□□□□ -0.8
TRAPPC12-221ENST00000489032 ISCA1Q9BUE6 129 aa10.06□□□□□ -0.8
TRAPPC12-221ENST00000489032 ATXN3LQ9H3M9 355 aa10.06□□□□□ -0.8
TRAPPC12-221ENST00000489032 KCNQ5Q9NR82 932 aa10.06□□□□□ -0.8
TRAPPC12-221ENST00000489032 CWC25Q9NXE8 425 aaPredicted RBP10.06□□□□□ -0.8
TRAPPC12-221ENST00000489032 CACNA2D2Q9NY47 1150 aa10.06□□□□□ -0.8
TRAPPC12-221ENST00000489032 UBP1Q9NZI7 540 aa10.06□□□□□ -0.8
TRAPPC12-221ENST00000489032 TRMT112Q9UI30 125 aaKnown RBP10.06□□□□□ -0.8
TRAPPC12-221ENST00000489032 CSADQ9Y600 493 aa10.06□□□□□ -0.8
TRAPPC12-221ENST00000489032 UBN2Q6ZU65 1347 aa10.06□□□□□ -0.8
TRAPPC12-221ENST00000489032 KIF16BQ96L93 1317 aa10.06□□□□□ -0.8
TRAPPC12-221ENST00000489032 CILPO75339 1184 aa10.05□□□□□ -0.8
TRAPPC12-221ENST00000489032 CELF2O95319 508 aaKnown RBP10.05□□□□□ -0.8
TRAPPC12-221ENST00000489032 ADH5P11766 374 aa10.05□□□□□ -0.8
TRAPPC12-221ENST00000489032 GARTP22102 1010 aa10.05□□□□□ -0.8
TRAPPC12-221ENST00000489032 MCM4P33991 863 aa10.05□□□□□ -0.8
TRAPPC12-221ENST00000489032 IARSP41252 1262 aaKnown RBP10.05□□□□□ -0.8
TRAPPC12-221ENST00000489032 TNNI2P48788 182 aa10.05□□□□□ -0.8
TRAPPC12-221ENST00000489032 USP11P51784 963 aa10.05□□□□□ -0.8
TRAPPC12-221ENST00000489032 EIF6P56537 245 aaKnown RBP10.05□□□□□ -0.8
TRAPPC12-221ENST00000489032 ADGRE1Q14246 886 aa10.05□□□□□ -0.8
TRAPPC12-221ENST00000489032 MBTPS1Q14703 1052 aa10.05□□□□□ -0.8
TRAPPC12-221ENST00000489032 TXNRD3Q86VQ6 643 aa10.05□□□□□ -0.8
TRAPPC12-221ENST00000489032 EAF1Q96JC9 268 aaPredicted RBP10.05□□□□□ -0.8
TRAPPC12-221ENST00000489032 API5Q9BZZ5 524 aaKnown RBP10.05□□□□□ -0.8
TRAPPC12-221ENST00000489032 PIDD1Q9HB75 910 aa10.05□□□□□ -0.8
TRAPPC12-221ENST00000489032 SH3TC1Q8TE82 1336 aa10.05□□□□□ -0.8
TRAPPC12-221ENST00000489032 ANKRD36CQ5JPF3 1778 aa10.04□□□□□ -0.8
TRAPPC12-221ENST00000489032 NTSR2O95665 410 aa10.04□□□□□ -0.8
TRAPPC12-221ENST00000489032 DRD2P14416 443 aa10.04□□□□□ -0.8
TRAPPC12-221ENST00000489032 NOS3P29474 1203 aa10.04□□□□□ -0.8
TRAPPC12-221ENST00000489032 KCNMA1Q12791 1236 aa10.04□□□□□ -0.8
TRAPPC12-221ENST00000489032 SEZ6Q53EL9 994 aa10.04□□□□□ -0.8
TRAPPC12-221ENST00000489032 SLC4A10Q6U841 1118 aa10.04□□□□□ -0.8
TRAPPC12-221ENST00000489032 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.04□□□□□ -0.8
TRAPPC12-221ENST00000489032 C12orf40Q86WS4 652 aa10.04□□□□□ -0.8
TRAPPC12-221ENST00000489032 LINS1Q8NG48 757 aa10.04□□□□□ -0.8
TRAPPC12-221ENST00000489032 PLPPR2Q96GM1 343 aa10.04□□□□□ -0.8
TRAPPC12-221ENST00000489032 YIPF2Q9BWQ6 316 aa10.04□□□□□ -0.8
TRAPPC12-221ENST00000489032 SAGE1Q9NXZ1 904 aa10.04□□□□□ -0.8
TRAPPC12-221ENST00000489032 NOB1Q9ULX3 412 aaKnown RBP10.04□□□□□ -0.8
TRAPPC12-221ENST00000489032 PRAMEF27A3QJZ7 478 aa10.03□□□□□ -0.8
TRAPPC12-221ENST00000489032 FAM221AA4D161 298 aa10.03□□□□□ -0.8
TRAPPC12-221ENST00000489032 KRBA1A5PL33 1030 aa10.03□□□□□ -0.8
TRAPPC12-221ENST00000489032 EPS15P42566 896 aa10.03□□□□□ -0.8
TRAPPC12-221ENST00000489032 ASPAP45381 313 aa10.03□□□□□ -0.8
TRAPPC12-221ENST00000489032 ERVK-24P63145 666 aa10.03□□□□□ -0.8
TRAPPC12-221ENST00000489032 INPP5AQ14642 412 aa10.03□□□□□ -0.8
TRAPPC12-221ENST00000489032 ZC3H12AQ5D1E8 599 aaKnown RBP10.03□□□□□ -0.8
TRAPPC12-221ENST00000489032 LRFN4Q6PJG9 635 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms