RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 ACTR10Q9NZ32 417 aa4.46□□□□□ -1.7
R3HDM1-219ENST00000488035 NTMQ9P121 344 aa4.46□□□□□ -1.7
R3HDM1-219ENST00000488035 DBR1Q9UK59 544 aaKnown RBP4.46□□□□□ -1.7
R3HDM1-219ENST00000488035 PCDHB12Q9Y5F1 795 aa4.46□□□□□ -1.7
R3HDM1-219ENST00000488035 MEIS1O00470 390 aa4.45□□□□□ -1.7
R3HDM1-219ENST00000488035 PLATP00750 562 aa4.45□□□□□ -1.7
R3HDM1-219ENST00000488035 PRR5P85299 388 aa4.45□□□□□ -1.7
R3HDM1-219ENST00000488035 DLX2Q07687 328 aaPredicted RBP4.45□□□□□ -1.7
R3HDM1-219ENST00000488035 CCDC144BQ3MJ40 725 aa4.45□□□□□ -1.7
R3HDM1-219ENST00000488035 TNNI3KQ59H18 835 aa4.45□□□□□ -1.7
R3HDM1-219ENST00000488035 INTS3Q68E01 1043 aaKnown RBP4.45□□□□□ -1.7
R3HDM1-219ENST00000488035 C6orf15Q6UXA7 325 aaPredicted RBP4.45□□□□□ -1.7
R3HDM1-219ENST00000488035 CYP2R1Q6VVX0 501 aa4.45□□□□□ -1.7
R3HDM1-219ENST00000488035 TTLL7Q6ZT98 887 aa4.45□□□□□ -1.7
R3HDM1-219ENST00000488035 CKAP2LQ8IYA6 745 aa4.45□□□□□ -1.7
R3HDM1-219ENST00000488035 C19orf47Q8N9M1 422 aaKnown RBP4.45□□□□□ -1.7
R3HDM1-219ENST00000488035 TMEM52Q8NDY8 209 aa4.45□□□□□ -1.7
R3HDM1-219ENST00000488035 HIRIP3Q9BW71 556 aaPredicted RBP4.45□□□□□ -1.7
R3HDM1-219ENST00000488035 SCAND2PQ9GZW5 306 aaPredicted RBP4.45□□□□□ -1.7
R3HDM1-219ENST00000488035 PDLIM7Q9NR12 457 aa4.45□□□□□ -1.7
R3HDM1-219ENST00000488035 F8W031 263 aaPredicted RBP4.44□□□□□ -1.7
R3HDM1-219ENST00000488035 GJB6O95452 261 aa4.44□□□□□ -1.7
R3HDM1-219ENST00000488035 SLPIP03973 132 aa4.44□□□□□ -1.7
R3HDM1-219ENST00000488035 GSNP06396 782 aa4.44□□□□□ -1.7
R3HDM1-219ENST00000488035 ACVRL1P37023 503 aa4.44□□□□□ -1.7
R3HDM1-219ENST00000488035 CEBPAP49715 358 aaPredicted RBP4.44□□□□□ -1.7
R3HDM1-219ENST00000488035 CORO7P57737 925 aa4.44□□□□□ -1.7
R3HDM1-219ENST00000488035 KIAA2012Q0VF49 1180 aa4.44□□□□□ -1.7
R3HDM1-219ENST00000488035 DDR2Q16832 855 aa4.44□□□□□ -1.7
R3HDM1-219ENST00000488035 MKRN2Q9H000 416 aaKnown RBP4.44□□□□□ -1.7
R3HDM1-219ENST00000488035 GFOD1Q9NXC2 390 aa4.44□□□□□ -1.7
R3HDM1-219ENST00000488035 FBXL21Q9UKT6 434 aa4.44□□□□□ -1.7
R3HDM1-219ENST00000488035 MINPP1Q9UNW1 487 aa4.44□□□□□ -1.7
R3HDM1-219ENST00000488035 LOC105371045A0A1W2PR82 267 aa4.43□□□□□ -1.7
R3HDM1-219ENST00000488035 FAM221BA6H8Z2 402 aa4.43□□□□□ -1.7
R3HDM1-219ENST00000488035 CCDC85CA6NKD9 419 aa4.43□□□□□ -1.7
R3HDM1-219ENST00000488035 SHOXO15266 292 aa4.43□□□□□ -1.7
R3HDM1-219ENST00000488035 FZD7O75084 574 aa4.43□□□□□ -1.7
R3HDM1-219ENST00000488035 TP53P04637 393 aaPredicted RBP4.43□□□□□ -1.7
R3HDM1-219ENST00000488035 ASGR2P07307 311 aa4.43□□□□□ -1.7
R3HDM1-219ENST00000488035 CTSKP43235 329 aa4.43□□□□□ -1.7
R3HDM1-219ENST00000488035 RASA3Q14644 834 aa4.43□□□□□ -1.7
R3HDM1-219ENST00000488035 BMS1Q14692 1282 aaKnown RBP4.43□□□□□ -1.7
R3HDM1-219ENST00000488035 TBC1D10BQ4KMP7 808 aaPredicted RBP4.43□□□□□ -1.7
R3HDM1-219ENST00000488035 AXDND1Q5T1B0 1012 aaPredicted RBP4.43□□□□□ -1.7
R3HDM1-219ENST00000488035 DCAF15Q66K64 600 aa4.43□□□□□ -1.7
R3HDM1-219ENST00000488035 CWF19L1Q69YN2 538 aaKnown RBP4.43□□□□□ -1.7
R3HDM1-219ENST00000488035 ZNF761Q86XN6 746 aaPredicted RBP4.43□□□□□ -1.7
R3HDM1-219ENST00000488035 FAM178BQ8IXR5 827 aa4.43□□□□□ -1.7
R3HDM1-219ENST00000488035 Q8N1X5 172 aa4.43□□□□□ -1.7
R3HDM1-219ENST00000488035 ALG3Q92685 438 aa4.43□□□□□ -1.7
R3HDM1-219ENST00000488035 KISS1RQ969F8 398 aaPredicted RBP4.43□□□□□ -1.7
R3HDM1-219ENST00000488035 TRIM55Q9BYV6 548 aa4.43□□□□□ -1.7
R3HDM1-219ENST00000488035 OSBPL2Q9H1P3 480 aa4.43□□□□□ -1.7
R3HDM1-219ENST00000488035 SUCOQ9UBS9 1254 aaKnown RBP4.43□□□□□ -1.7
R3HDM1-219ENST00000488035 ZNF214Q9UL59 606 aaPredicted RBP4.43□□□□□ -1.7
R3HDM1-219ENST00000488035 MSRB2Q9Y3D2 182 aa4.43□□□□□ -1.7
R3HDM1-219ENST00000488035 CBFA2T2O43439 604 aa4.42□□□□□ -1.7
R3HDM1-219ENST00000488035 GSTM1P09488 218 aa4.42□□□□□ -1.7
R3HDM1-219ENST00000488035 PMS1P54277 932 aaKnown RBP4.42□□□□□ -1.7
R3HDM1-219ENST00000488035 RTP2Q5QGT7 225 aa4.42□□□□□ -1.7
R3HDM1-219ENST00000488035 KIAA1211LQ6NV74 962 aa4.42□□□□□ -1.7
R3HDM1-219ENST00000488035 BORAQ6PGQ7 559 aa4.42□□□□□ -1.7
R3HDM1-219ENST00000488035 VHLLQ6RSH7 139 aa4.42□□□□□ -1.7
R3HDM1-219ENST00000488035 CRTC3Q6UUV7 619 aa4.42□□□□□ -1.7
R3HDM1-219ENST00000488035 GLB1LQ6UWU2 654 aa4.42□□□□□ -1.7
R3HDM1-219ENST00000488035 FAM124AQ86V42 546 aa4.42□□□□□ -1.7
R3HDM1-219ENST00000488035 DSCC1Q9BVC3 393 aa4.42□□□□□ -1.7
R3HDM1-219ENST00000488035 LGR4Q9BXB1 951 aa4.42□□□□□ -1.7
R3HDM1-219ENST00000488035 ZSWIM4Q9H7M6 989 aa4.42□□□□□ -1.7
R3HDM1-219ENST00000488035 PHAXQ9H814 394 aaKnown RBP4.42□□□□□ -1.7
R3HDM1-219ENST00000488035 SNTG2Q9NY99 539 aa4.42□□□□□ -1.7
R3HDM1-219ENST00000488035 R3HCC1Q9Y3T6 440 aaKnown RBP4.42□□□□□ -1.7
R3HDM1-219ENST00000488035 HCFC2Q9Y5Z7 792 aa4.42□□□□□ -1.7
R3HDM1-219ENST00000488035 SMARCA5O60264 1052 aaPredicted RBP4.41□□□□□ -1.7
R3HDM1-219ENST00000488035 DDAH1O94760 285 aa4.41□□□□□ -1.7
R3HDM1-219ENST00000488035 MC3RP41968 323 aa4.41□□□□□ -1.7
R3HDM1-219ENST00000488035 AUHQ13825 339 aaKnown RBP4.41□□□□□ -1.7
R3HDM1-219ENST00000488035 SLC9A5Q14940 896 aa4.41□□□□□ -1.7
R3HDM1-219ENST00000488035 FXNQ16595 210 aa4.41□□□□□ -1.7
R3HDM1-219ENST00000488035 GNPTABQ3T906 1256 aa4.41□□□□□ -1.7
R3HDM1-219ENST00000488035 NBPF6Q5VWK0 638 aa4.41□□□□□ -1.7
R3HDM1-219ENST00000488035 CRIP3Q6Q6R5 217 aa4.41□□□□□ -1.7
R3HDM1-219ENST00000488035 CABP7Q86V35 215 aa4.41□□□□□ -1.7
R3HDM1-219ENST00000488035 LGI4Q8N135 537 aa4.41□□□□□ -1.7
R3HDM1-219ENST00000488035 NLGN2Q8NFZ4 835 aa4.41□□□□□ -1.7
R3HDM1-219ENST00000488035 ADAMTS17Q8TE56 1095 aa4.41□□□□□ -1.7
R3HDM1-219ENST00000488035 SH3RF3Q8TEJ3 882 aaPredicted RBP4.41□□□□□ -1.7
R3HDM1-219ENST00000488035 CPA5Q8WXQ8 436 aa4.41□□□□□ -1.7
R3HDM1-219ENST00000488035 TSPAN17Q96FV3 270 aa4.41□□□□□ -1.7
R3HDM1-219ENST00000488035 NBPF4Q96M43 638 aa4.41□□□□□ -1.7
R3HDM1-219ENST00000488035 CDK5RAP1Q96SZ6 601 aaKnown RBP4.41□□□□□ -1.7
R3HDM1-219ENST00000488035 CDK11AQ9UQ88 783 aaPredicted RBP4.41□□□□□ -1.7
R3HDM1-219ENST00000488035 TSC22D4Q9Y3Q8 395 aa4.41□□□□□ -1.7
R3HDM1-219ENST00000488035 TBC1D8O95759 1140 aa4.4□□□□□ -1.71
R3HDM1-219ENST00000488035 EPHX1P07099 455 aa4.4□□□□□ -1.71
R3HDM1-219ENST00000488035 TGM1P22735 817 aa4.4□□□□□ -1.71
R3HDM1-219ENST00000488035 NOP2P46087 812 aaKnown RBP4.4□□□□□ -1.71
R3HDM1-219ENST00000488035 SLC7A5Q01650 507 aa4.4□□□□□ -1.71
R3HDM1-219ENST00000488035 GIMAP6Q6P9H5 292 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms