RNA–Protein interactions for RNA: ENST00000486039.1

SNX5-213, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-213ENST00000486039 GLT1D1Q96MS3 346 aa22.67■■□□□ 1.22
SNX5-213ENST00000486039 RMDN3Q96TC7 470 aa22.67■■□□□ 1.22
SNX5-213ENST00000486039 AP5M1Q9H0R1 490 aa22.67■■□□□ 1.22
SNX5-213ENST00000486039 MYH6P13533 1939 aa22.67■■□□□ 1.22
SNX5-213ENST00000486039 LTBP2Q14767 1821 aa22.66■■□□□ 1.22
SNX5-213ENST00000486039 ELP1O95163 1332 aa22.66■■□□□ 1.22
SNX5-213ENST00000486039 B4DLN1 442 aa22.66■■□□□ 1.22
SNX5-213ENST00000486039 PLEKHA8P1O95397 391 aa22.66■■□□□ 1.22
SNX5-213ENST00000486039 CENPBP07199 599 aaPredicted RBP22.66■■□□□ 1.22
SNX5-213ENST00000486039 SMARCA1P28370 1054 aa22.66■■□□□ 1.22
SNX5-213ENST00000486039 MRPL12P52815 198 aaKnown RBP22.66■■□□□ 1.22
SNX5-213ENST00000486039 FSCN1Q16658 493 aaKnown RBP22.66■■□□□ 1.22
SNX5-213ENST00000486039 DHX32Q7L7V1 743 aaKnown RBP22.66■■□□□ 1.22
SNX5-213ENST00000486039 SGMS1Q86VZ5 419 aa22.66■■□□□ 1.22
SNX5-213ENST00000486039 SRBD1Q8N5C6 995 aaKnown RBP22.66■■□□□ 1.22
SNX5-213ENST00000486039 SPZ1Q9BXG8 430 aa22.66■■□□□ 1.22
SNX5-213ENST00000486039 SLC12A7Q9Y666 1083 aa22.66■■□□□ 1.22
SNX5-213ENST00000486039 TRIM43BA6NCK2 446 aa22.65■■□□□ 1.22
SNX5-213ENST00000486039 CALM1P0DP23 149 aa22.65■■□□□ 1.22
SNX5-213ENST00000486039 CALM2P0DP24 149 aa22.65■■□□□ 1.22
SNX5-213ENST00000486039 CALM3P0DP25 149 aa22.65■■□□□ 1.22
SNX5-213ENST00000486039 KRT32Q14532 448 aa22.65■■□□□ 1.22
SNX5-213ENST00000486039 ANKRD33Q7Z3H0 272 aa22.65■■□□□ 1.22
SNX5-213ENST00000486039 CMTR1Q8N1G2 835 aaKnown RBP22.65■■□□□ 1.22
SNX5-213ENST00000486039 BADQ92934 168 aa22.65■■□□□ 1.22
SNX5-213ENST00000486039 TRIM43Q96BQ3 446 aaPredicted RBP22.65■■□□□ 1.22
SNX5-213ENST00000486039 LZTS2Q9BRK4 669 aa22.65■■□□□ 1.22
SNX5-213ENST00000486039 MAP3K20Q9NYL2 800 aaKnown RBP22.65■■□□□ 1.22
SNX5-213ENST00000486039 BAZ2BQ9UIF8 2168 aaKnown RBP22.65■■□□□ 1.22
SNX5-213ENST00000486039 PQBP1O60828 265 aaKnown RBP22.64■■□□□ 1.21
SNX5-213ENST00000486039 EIF2AK2P19525 551 aaKnown RBP22.64■■□□□ 1.21
SNX5-213ENST00000486039 HOXA13P31271 388 aaPredicted RBP22.64■■□□□ 1.21
SNX5-213ENST00000486039 HSPA4P34932 840 aa22.64■■□□□ 1.21
SNX5-213ENST00000486039 GNAQP50148 359 aa22.64■■□□□ 1.21
SNX5-213ENST00000486039 CDK7P50613 346 aa22.64■■□□□ 1.21
SNX5-213ENST00000486039 TRAF1Q13077 416 aa22.64■■□□□ 1.21
SNX5-213ENST00000486039 ARHGEF16Q5VV41 709 aa22.64■■□□□ 1.21
SNX5-213ENST00000486039 CXCL17Q6UXB2 119 aa22.64■■□□□ 1.21
SNX5-213ENST00000486039 SAMD3Q8N6K7 520 aa22.64■■□□□ 1.21
SNX5-213ENST00000486039 SCFD2Q8WU76 684 aa22.64■■□□□ 1.21
SNX5-213ENST00000486039 VTI1AQ96AJ9 217 aa22.64■■□□□ 1.21
SNX5-213ENST00000486039 TOX2Q96NM4 488 aa22.64■■□□□ 1.21
SNX5-213ENST00000486039 IWS1Q96ST2 819 aa22.64■■□□□ 1.21
SNX5-213ENST00000486039 PXMP2Q9NR77 195 aa22.64■■□□□ 1.21
SNX5-213ENST00000486039 MTMR10Q9NXD2 777 aa22.64■■□□□ 1.21
SNX5-213ENST00000486039 ARIH2O95376 493 aa22.63■■□□□ 1.21
SNX5-213ENST00000486039 CLTBP09497 229 aa22.63■■□□□ 1.21
SNX5-213ENST00000486039 FANCBQ8NB91 859 aa22.63■■□□□ 1.21
SNX5-213ENST00000486039 COPS5Q92905 334 aa22.63■■□□□ 1.21
SNX5-213ENST00000486039 RRP36Q96EU6 259 aaKnown RBP22.63■■□□□ 1.21
SNX5-213ENST00000486039 A0A0U1RQG5 324 aaPredicted RBP22.62■■□□□ 1.21
SNX5-213ENST00000486039 ARVCFO00192 962 aa22.62■■□□□ 1.21
SNX5-213ENST00000486039 ZEB2O60315 1214 aa22.62■■□□□ 1.21
SNX5-213ENST00000486039 NR3C2P08235 984 aa22.62■■□□□ 1.21
SNX5-213ENST00000486039 TXNP10599 105 aaKnown RBP22.62■■□□□ 1.21
SNX5-213ENST00000486039 ITGB8P26012 769 aa22.62■■□□□ 1.21
SNX5-213ENST00000486039 FAAP100Q0VG06 881 aa22.62■■□□□ 1.21
SNX5-213ENST00000486039 PPP2R5BQ15173 497 aa22.62■■□□□ 1.21
SNX5-213ENST00000486039 SHHQ15465 462 aa22.62■■□□□ 1.21
SNX5-213ENST00000486039 STXBP2Q15833 593 aa22.62■■□□□ 1.21
SNX5-213ENST00000486039 MICU3Q86XE3 530 aa22.62■■□□□ 1.21
SNX5-213ENST00000486039 BRPF3Q9ULD4 1205 aa22.62■■□□□ 1.21
SNX5-213ENST00000486039 SNX14Q9Y5W7 946 aa22.62■■□□□ 1.21
SNX5-213ENST00000486039 GCOM1H8Y6P7 765 aaPredicted RBP22.61■■□□□ 1.21
SNX5-213ENST00000486039 NKRFO15226 690 aaKnown RBP eCLIP22.61■■□□□ 1.21
SNX5-213ENST00000486039 REC8O95072 547 aa22.61■■□□□ 1.21
SNX5-213ENST00000486039 POLR2MP0CAP2 368 aa22.61■■□□□ 1.21
SNX5-213ENST00000486039 CPA1P15085 419 aa22.61■■□□□ 1.21
SNX5-213ENST00000486039 TTLL4Q14679 1199 aa22.61■■□□□ 1.21
SNX5-213ENST00000486039 FAM109BQ6ICB4 259 aaPredicted RBP22.61■■□□□ 1.21
SNX5-213ENST00000486039 CCDC62Q6P9F0 684 aa22.61■■□□□ 1.21
SNX5-213ENST00000486039 APOA5Q6Q788 366 aa22.61■■□□□ 1.21
SNX5-213ENST00000486039 SEPT14Q6ZU15 432 aa22.61■■□□□ 1.21
SNX5-213ENST00000486039 TMTC3Q6ZXV5 915 aa22.61■■□□□ 1.21
SNX5-213ENST00000486039 SLC17A8Q8NDX2 589 aa22.61■■□□□ 1.21
SNX5-213ENST00000486039 OR6J1Q8NGC5 347 aa22.61■■□□□ 1.21
SNX5-213ENST00000486039 PDCD2LQ9BRP1 358 aa22.61■■□□□ 1.21
SNX5-213ENST00000486039 DCDC2CA8MYV0 355 aa22.6■■□□□ 1.21
SNX5-213ENST00000486039 CABYRO75952 493 aa22.6■■□□□ 1.21
SNX5-213ENST00000486039 HMGB1P09429 215 aaKnown RBP22.6■■□□□ 1.21
SNX5-213ENST00000486039 C9orf50Q5SZB4 431 aa22.6■■□□□ 1.21
SNX5-213ENST00000486039 SYNE3Q6ZMZ3 975 aa22.6■■□□□ 1.21
SNX5-213ENST00000486039 CCDC82Q8N4S0 544 aa22.6■■□□□ 1.21
SNX5-213ENST00000486039 SLC43A3Q8NBI5 491 aa22.6■■□□□ 1.21
SNX5-213ENST00000486039 STXBP5LQ9Y2K9 1186 aa22.6■■□□□ 1.21
SNX5-213ENST00000486039 GRIN2DO15399 1336 aa22.59■■□□□ 1.21
SNX5-213ENST00000486039 KIAA0355O15063 1070 aa22.59■■□□□ 1.21
SNX5-213ENST00000486039 EIF3JO75822 258 aaKnown RBP22.59■■□□□ 1.21
SNX5-213ENST00000486039 PGM5Q15124 567 aa22.59■■□□□ 1.21
SNX5-213ENST00000486039 LY6KQ17RY6 165 aa22.59■■□□□ 1.21
SNX5-213ENST00000486039 FCHSD1Q86WN1 690 aa22.59■■□□□ 1.21
SNX5-213ENST00000486039 JAKMIP1Q96N16 626 aaKnown RBP22.59■■□□□ 1.21
SNX5-213ENST00000486039 TMEM39AQ9NV64 488 aa22.59■■□□□ 1.21
SNX5-213ENST00000486039 SEC63Q9UGP8 760 aaKnown RBP22.59■■□□□ 1.21
SNX5-213ENST00000486039 MROH7Q68CQ1 1323 aa22.58■■□□□ 1.21
SNX5-213ENST00000486039 hCG_1642624A0A1W2PR95 340 aa22.58■■□□□ 1.21
SNX5-213ENST00000486039 MYCLP12524 364 aaPredicted RBP22.58■■□□□ 1.21
SNX5-213ENST00000486039 CPT1AP50416 773 aa22.58■■□□□ 1.21
SNX5-213ENST00000486039 PSMC6P62333 389 aa22.58■■□□□ 1.21
SNX5-213ENST00000486039 ITGA7Q13683 1181 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms