RNA–Protein interactions for RNA: ENST00000483503.5

SND1-210, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-210ENST00000483503 MRPL11Q9Y3B7 192 aaKnown RBP13.38□□□□□ -0.27
SND1-210ENST00000483503 R3HCC1Q9Y3T6 440 aaKnown RBP13.38□□□□□ -0.27
SND1-210ENST00000483503 USP17L15C9J2P7 530 aa13.37□□□□□ -0.27
SND1-210ENST00000483503 USP17L13C9JLJ4 530 aa13.37□□□□□ -0.27
SND1-210ENST00000483503 USP17L11C9JVI0 530 aa13.37□□□□□ -0.27
SND1-210ENST00000483503 USP17L18D6R9N7 530 aa13.37□□□□□ -0.27
SND1-210ENST00000483503 USP17L22D6RA61 530 aa13.37□□□□□ -0.27
SND1-210ENST00000483503 USP17L17D6RBQ6 530 aa13.37□□□□□ -0.27
SND1-210ENST00000483503 USP17L19D6RCP7 530 aa13.37□□□□□ -0.27
SND1-210ENST00000483503 USP17L20D6RJB6 530 aa13.37□□□□□ -0.27
SND1-210ENST00000483503 EDIL3O43854 480 aa13.37□□□□□ -0.27
SND1-210ENST00000483503 KLRC4O43908 158 aa13.37□□□□□ -0.27
SND1-210ENST00000483503 TUBB4AP04350 444 aa13.37□□□□□ -0.27
SND1-210ENST00000483503 CYP3A4P08684 503 aa13.37□□□□□ -0.27
SND1-210ENST00000483503 TPM1P09493 284 aa13.37□□□□□ -0.27
SND1-210ENST00000483503 SREBF1P36956 1147 aa13.37□□□□□ -0.27
SND1-210ENST00000483503 STX17P56962 302 aa13.37□□□□□ -0.27
SND1-210ENST00000483503 ARHGAP4P98171 946 aa13.37□□□□□ -0.27
SND1-210ENST00000483503 USP17L24Q0WX57 530 aa13.37□□□□□ -0.27
SND1-210ENST00000483503 GRB10Q13322 594 aa13.37□□□□□ -0.27
SND1-210ENST00000483503 NR1I3Q14994 352 aa13.37□□□□□ -0.27
SND1-210ENST00000483503 NBPF9Q3BBW0 867 aa13.37□□□□□ -0.27
SND1-210ENST00000483503 TMEM119Q4V9L6 283 aa13.37□□□□□ -0.27
SND1-210ENST00000483503 HYIQ5T013 277 aa13.37□□□□□ -0.27
SND1-210ENST00000483503 FAM83BQ5T0W9 1011 aa13.37□□□□□ -0.27
SND1-210ENST00000483503 USP17L6PQ6QN14 398 aa13.37□□□□□ -0.27
SND1-210ENST00000483503 KCTD17Q8N5Z5 321 aa13.37□□□□□ -0.27
SND1-210ENST00000483503 ACER1Q8TDN7 264 aa13.37□□□□□ -0.27
SND1-210ENST00000483503 LARP4BQ92615 738 aaKnown RBP13.37□□□□□ -0.27
SND1-210ENST00000483503 RAD54LQ92698 747 aa13.37□□□□□ -0.27
SND1-210ENST00000483503 FAM20AQ96MK3 541 aa13.37□□□□□ -0.27
SND1-210ENST00000483503 MED15Q96RN5 788 aa13.37□□□□□ -0.27
SND1-210ENST00000483503 PLIN2Q99541 437 aa13.37□□□□□ -0.27
SND1-210ENST00000483503 RANBP17Q9H2T7 1088 aaKnown RBP13.37□□□□□ -0.27
SND1-210ENST00000483503 BMP2KQ9NSY1 1161 aaPredicted RBP13.37□□□□□ -0.27
SND1-210ENST00000483503 PPP1R1BQ9UD71 204 aaPredicted RBP13.37□□□□□ -0.27
SND1-210ENST00000483503 PNMA2Q9UL42 364 aa13.37□□□□□ -0.27
SND1-210ENST00000483503 BCS1LQ9Y276 419 aa13.37□□□□□ -0.27
SND1-210ENST00000483503 ABCB11O95342 1321 aa13.37□□□□□ -0.27
SND1-210ENST00000483503 PSDA5PKW4 1024 aaPredicted RBP13.36□□□□□ -0.27
SND1-210ENST00000483503 LRRC10BA6NIK2 292 aa13.36□□□□□ -0.27
SND1-210ENST00000483503 CIITAP33076 1130 aa13.36□□□□□ -0.27
SND1-210ENST00000483503 PRCPP42785 496 aa13.36□□□□□ -0.27
SND1-210ENST00000483503 ECE1P42892 770 aa13.36□□□□□ -0.27
SND1-210ENST00000483503 PDE4DQ08499 809 aa13.36□□□□□ -0.27
SND1-210ENST00000483503 PSMD2Q13200 908 aa13.36□□□□□ -0.27
SND1-210ENST00000483503 TBX2Q13207 712 aaPredicted RBP13.36□□□□□ -0.27
SND1-210ENST00000483503 RASA3Q14644 834 aa13.36□□□□□ -0.27
SND1-210ENST00000483503 USH1GQ495M9 461 aa13.36□□□□□ -0.27
SND1-210ENST00000483503 DCAF15Q66K64 600 aa13.36□□□□□ -0.27
SND1-210ENST00000483503 HAUS3Q68CZ6 603 aa13.36□□□□□ -0.27
SND1-210ENST00000483503 ARMCX5Q6P1M9 558 aa13.36□□□□□ -0.27
SND1-210ENST00000483503 UNC13DQ70J99 1090 aa13.36□□□□□ -0.27
SND1-210ENST00000483503 FCHSD1Q86WN1 690 aa13.36□□□□□ -0.27
SND1-210ENST00000483503 FAM114A1Q8IWE2 563 aa13.36□□□□□ -0.27
SND1-210ENST00000483503 SMYD4Q8IYR2 804 aaPredicted RBP13.36□□□□□ -0.27
SND1-210ENST00000483503 SPICE1Q8N0Z3 855 aa13.36□□□□□ -0.27
SND1-210ENST00000483503 LPAR1Q92633 364 aa13.36□□□□□ -0.27
SND1-210ENST00000483503 HAS1Q92839 578 aa13.36□□□□□ -0.27
SND1-210ENST00000483503 PNMA5Q96PV4 448 aa13.36□□□□□ -0.27
SND1-210ENST00000483503 THAP9Q9H5L6 903 aa13.36□□□□□ -0.27
SND1-210ENST00000483503 KCNMB3Q9NPA1 279 aa13.36□□□□□ -0.27
SND1-210ENST00000483503 RABGAP1Q9Y3P9 1069 aa13.36□□□□□ -0.27
SND1-210ENST00000483503 MYH7BA7E2Y1 1941 aa13.36□□□□□ -0.27
SND1-210ENST00000483503 GCOM1H8Y6P7 765 aaPredicted RBP13.35□□□□□ -0.27
SND1-210ENST00000483503 FZD9O00144 591 aa13.35□□□□□ -0.27
SND1-210ENST00000483503 CTNND1O60716 968 aaKnown RBP13.35□□□□□ -0.27
SND1-210ENST00000483503 FGFR1OPO95684 399 aaKnown RBP13.35□□□□□ -0.27
SND1-210ENST00000483503 POLR2MP0CAP2 368 aa13.35□□□□□ -0.27
SND1-210ENST00000483503 CCNE1P24864 410 aa13.35□□□□□ -0.27
SND1-210ENST00000483503 EEF1GP26641 437 aaKnown RBP13.35□□□□□ -0.27
SND1-210ENST00000483503 CCT6AP40227 531 aaKnown RBP13.35□□□□□ -0.27
SND1-210ENST00000483503 TRIM14Q14142 442 aa13.35□□□□□ -0.27
SND1-210ENST00000483503 ARID5BQ14865 1188 aa13.35□□□□□ -0.27
SND1-210ENST00000483503 MIGA2Q7L4E1 593 aa13.35□□□□□ -0.27
SND1-210ENST00000483503 PPFIBP1Q86W92 1011 aa13.35□□□□□ -0.27
SND1-210ENST00000483503 C17orf53Q8N3J3 647 aaPredicted RBP13.35□□□□□ -0.27
SND1-210ENST00000483503 SAMD3Q8N6K7 520 aa13.35□□□□□ -0.27
SND1-210ENST00000483503 CRYGNQ8WXF5 182 aa13.35□□□□□ -0.27
SND1-210ENST00000483503 FEZ1Q99689 392 aa13.35□□□□□ -0.27
SND1-210ENST00000483503 MAGEC2Q9UBF1 373 aaPredicted RBP13.35□□□□□ -0.27
SND1-210ENST00000483503 ADD3Q9UEY8 706 aaKnown RBP13.35□□□□□ -0.27
SND1-210ENST00000483503 GDAQ9Y2T3 454 aa13.35□□□□□ -0.27
SND1-210ENST00000483503 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.35□□□□□ -0.275e-15■□□□□ 10.9
SND1-210ENST00000483503 ITIH6Q6UXX5 1313 aa13.35□□□□□ -0.27
SND1-210ENST00000483503 POTEMA6NI47 508 aa13.34□□□□□ -0.27
SND1-210ENST00000483503 KCNJ18B7U540 433 aa13.34□□□□□ -0.27
SND1-210ENST00000483503 WDR46O15213 610 aaKnown RBP13.34□□□□□ -0.27
SND1-210ENST00000483503 ZNF76P36508 570 aa13.34□□□□□ -0.27
SND1-210ENST00000483503 GMPSP49915 693 aaPredicted RBP13.34□□□□□ -0.27
SND1-210ENST00000483503 KCNJ12Q14500 433 aa13.34□□□□□ -0.27
SND1-210ENST00000483503 MCM6Q14566 821 aa13.34□□□□□ -0.27
SND1-210ENST00000483503 R3HDM1Q15032 1099 aaKnown RBP13.34□□□□□ -0.27
SND1-210ENST00000483503 TCP11X2Q5H9J9 407 aa13.34□□□□□ -0.27
SND1-210ENST00000483503 FOXR2Q6PJQ5 311 aa13.34□□□□□ -0.27
SND1-210ENST00000483503 APOBEC3FQ8IUX4 373 aaKnown RBP13.34□□□□□ -0.27
SND1-210ENST00000483503 MICALL2Q8IY33 904 aa13.34□□□□□ -0.27
SND1-210ENST00000483503 KIFC2Q96AC6 838 aa13.34□□□□□ -0.27
SND1-210ENST00000483503 CCDC51Q96ER9 411 aa13.34□□□□□ -0.27
SND1-210ENST00000483503 SGIP1Q9BQI5 828 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms