RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 STOX1Q6ZVD7 989 aa21.63■■□□□ 1.05
CLK1-211ENST00000481641 TRMT13Q9NUP7 481 aaKnown RBP21.63■■□□□ 1.05
CLK1-211ENST00000481641 POLR3EQ9NVU0 708 aa21.63■■□□□ 1.05
CLK1-211ENST00000481641 MRPL11Q9Y3B7 192 aaKnown RBP21.63■■□□□ 1.05
CLK1-211ENST00000481641 A0A0C4DFX4 3053 aa21.63■■□□□ 1.05
CLK1-211ENST00000481641 BAZ2BQ9UIF8 2168 aaKnown RBP21.63■■□□□ 1.05
CLK1-211ENST00000481641 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.62■■□□□ 1.05
CLK1-211ENST00000481641 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.62■■□□□ 1.05
CLK1-211ENST00000481641 GRXCR1A8MXD5 290 aa21.62■■□□□ 1.05
CLK1-211ENST00000481641 E7EWF7 191 aa21.62■■□□□ 1.05
CLK1-211ENST00000481641 IFIT3O14879 490 aaKnown RBP21.62■■□□□ 1.05
CLK1-211ENST00000481641 SEPT14Q6ZU15 432 aa21.62■■□□□ 1.05
CLK1-211ENST00000481641 MCF2L2Q86YR7 1114 aa21.62■■□□□ 1.05
CLK1-211ENST00000481641 RMDN3Q96TC7 470 aa21.62■■□□□ 1.05
CLK1-211ENST00000481641 NOC4LQ9BVI4 516 aaKnown RBP21.62■■□□□ 1.05
CLK1-211ENST00000481641 ALDH8A1Q9H2A2 487 aaPredicted RBP21.62■■□□□ 1.05
CLK1-211ENST00000481641 PALM3A6NDB9 673 aaPredicted RBP21.61■■□□□ 1.05
CLK1-211ENST00000481641 B4DLN1 442 aa21.61■■□□□ 1.05
CLK1-211ENST00000481641 OPLAHO14841 1288 aa21.61■■□□□ 1.05
CLK1-211ENST00000481641 NKRFO15226 690 aaKnown RBP eCLIP21.61■■□□□ 1.05
CLK1-211ENST00000481641 CFBP00751 764 aa21.61■■□□□ 1.05
CLK1-211ENST00000481641 EIF2AK2P19525 551 aaKnown RBP21.61■■□□□ 1.05
CLK1-211ENST00000481641 MRPL12P52815 198 aaKnown RBP21.61■■□□□ 1.05
CLK1-211ENST00000481641 TTLL4Q14679 1199 aa21.61■■□□□ 1.05
CLK1-211ENST00000481641 LY6KQ17RY6 165 aa21.61■■□□□ 1.05
CLK1-211ENST00000481641 NSUN6Q8TEA1 469 aaKnown RBP21.61■■□□□ 1.05
CLK1-211ENST00000481641 MYLIPQ8WY64 445 aa21.61■■□□□ 1.05
CLK1-211ENST00000481641 MTG1Q9BT17 334 aaPredicted RBP21.61■■□□□ 1.05
CLK1-211ENST00000481641 AMNQ9BXJ7 453 aa21.61■■□□□ 1.05
CLK1-211ENST00000481641 WNT8AQ9H1J5 351 aa21.61■■□□□ 1.05
CLK1-211ENST00000481641 IL23AQ9NPF7 189 aa21.61■■□□□ 1.05
CLK1-211ENST00000481641 GPHNQ9NQX3 736 aaPredicted RBP21.61■■□□□ 1.05
CLK1-211ENST00000481641 CDH23Q9H251 3354 aa21.6■■□□□ 1.05
CLK1-211ENST00000481641 CYP2C9P11712 490 aa21.6■■□□□ 1.05
CLK1-211ENST00000481641 NBPF20Q3BBV1 942 aa21.6■■□□□ 1.05
CLK1-211ENST00000481641 ARHGEF16Q5VV41 709 aa21.6■■□□□ 1.05
CLK1-211ENST00000481641 CCDC62Q6P9F0 684 aa21.6■■□□□ 1.05
CLK1-211ENST00000481641 HOMER1Q86YM7 354 aa21.6■■□□□ 1.05
CLK1-211ENST00000481641 MTMR8Q96EF0 704 aa21.6■■□□□ 1.05
CLK1-211ENST00000481641 SEZ6LQ9BYH1 1024 aa21.6■■□□□ 1.05
CLK1-211ENST00000481641 SCN10AQ9Y5Y9 1956 aa21.59■■□□□ 1.05
CLK1-211ENST00000481641 A6NJR5 290 aa21.59■■□□□ 1.05
CLK1-211ENST00000481641 DNAJB2P25686 324 aa21.59■■□□□ 1.05
CLK1-211ENST00000481641 PBX2P40425 430 aa21.59■■□□□ 1.05
CLK1-211ENST00000481641 ANTXR2P58335 489 aa21.59■■□□□ 1.05
CLK1-211ENST00000481641 GRM4Q14833 912 aa21.59■■□□□ 1.05
CLK1-211ENST00000481641 WTAPQ15007 396 aa21.59■■□□□ 1.05
CLK1-211ENST00000481641 FAM47CQ5HY64 1035 aa21.59■■□□□ 1.05
CLK1-211ENST00000481641 RASIP1Q5U651 963 aa21.59■■□□□ 1.05
CLK1-211ENST00000481641 RALYLQ86SE5 291 aaKnown RBP21.59■■□□□ 1.05
CLK1-211ENST00000481641 NCOA7Q8NI08 942 aa21.59■■□□□ 1.05
CLK1-211ENST00000481641 MAP4K1Q92918 833 aa21.59■■□□□ 1.05
CLK1-211ENST00000481641 SCLYQ96I15 445 aa21.59■■□□□ 1.05
CLK1-211ENST00000481641 PIGSQ96S52 555 aa21.59■■□□□ 1.05
CLK1-211ENST00000481641 CXXC1Q9P0U4 656 aaPredicted RBP21.59■■□□□ 1.05
CLK1-211ENST00000481641 PCDHA1Q9Y5I3 950 aa21.59■■□□□ 1.05
CLK1-211ENST00000481641 RBM8AQ9Y5S9 174 aaKnown RBP21.59■■□□□ 1.05
CLK1-211ENST00000481641 ZBTB5O15062 677 aa21.58■■□□□ 1.05
CLK1-211ENST00000481641 CHMP4BP1P59074 171 aa21.58■■□□□ 1.05
CLK1-211ENST00000481641 STXBP2Q15833 593 aa21.58■■□□□ 1.05
CLK1-211ENST00000481641 BRDTQ58F21 947 aaPredicted RBP21.58■■□□□ 1.05
CLK1-211ENST00000481641 PSRC1Q6PGN9 363 aaPredicted RBP21.58■■□□□ 1.05
CLK1-211ENST00000481641 SKAP1Q86WV1 359 aa21.58■■□□□ 1.05
CLK1-211ENST00000481641 AFG1LQ8WV93 481 aa21.58■■□□□ 1.05
CLK1-211ENST00000481641 IWS1Q96ST2 819 aa21.58■■□□□ 1.05
CLK1-211ENST00000481641 MAF1Q9H063 256 aa21.58■■□□□ 1.05
CLK1-211ENST00000481641 PXMP2Q9NR77 195 aa21.58■■□□□ 1.05
CLK1-211ENST00000481641 KIAA1217Q5T5P2 1943 aa21.58■■□□□ 1.04
CLK1-211ENST00000481641 EYSQ5T1H1 3165 aa21.58■■□□□ 1.04
CLK1-211ENST00000481641 ERICH2A1L162 156 aa21.57■■□□□ 1.04
CLK1-211ENST00000481641 DLL1O00548 723 aa21.57■■□□□ 1.04
CLK1-211ENST00000481641 CYTH3O43739 400 aa21.57■■□□□ 1.04
CLK1-211ENST00000481641 FGBP02675 491 aa21.57■■□□□ 1.04
CLK1-211ENST00000481641 NR3C2P08235 984 aa21.57■■□□□ 1.04
CLK1-211ENST00000481641 HOXA13P31271 388 aaPredicted RBP21.57■■□□□ 1.04
CLK1-211ENST00000481641 HSD17B4P51659 736 aa21.57■■□□□ 1.04
CLK1-211ENST00000481641 TMEM67Q5HYA8 995 aa21.57■■□□□ 1.04
CLK1-211ENST00000481641 OTOP2Q7RTS6 562 aa21.57■■□□□ 1.04
CLK1-211ENST00000481641 MB21D2Q8IYB1 491 aaPredicted RBP21.57■■□□□ 1.04
CLK1-211ENST00000481641 VWCEQ96DN2 955 aa21.57■■□□□ 1.04
CLK1-211ENST00000481641 GH1P01241 217 aa21.56■■□□□ 1.04
CLK1-211ENST00000481641 ARHGAP1Q07960 439 aa21.56■■□□□ 1.04
CLK1-211ENST00000481641 TROAPQ12815 778 aa21.56■■□□□ 1.04
CLK1-211ENST00000481641 GRIN2CQ14957 1233 aa21.56■■□□□ 1.04
CLK1-211ENST00000481641 IGDCC4Q8TDY8 1250 aa21.56■■□□□ 1.04
CLK1-211ENST00000481641 PIBF1Q8WXW3 757 aa21.56■■□□□ 1.04
CLK1-211ENST00000481641 HERVK_113Q902F9 699 aa21.56■■□□□ 1.04
CLK1-211ENST00000481641 TIFAQ96CG3 184 aa21.56■■□□□ 1.04
CLK1-211ENST00000481641 PBX4Q9BYU1 374 aa21.56■■□□□ 1.04
CLK1-211ENST00000481641 RIOX1Q9H6W3 641 aa21.56■■□□□ 1.04
CLK1-211ENST00000481641 UNC80Q8N2C7 3258 aa21.56■■□□□ 1.04
CLK1-211ENST00000481641 KPNA6O60684 536 aa21.55■■□□□ 1.04
CLK1-211ENST00000481641 MMP3P08254 477 aa21.55■■□□□ 1.04
CLK1-211ENST00000481641 MYCLP12524 364 aaPredicted RBP21.55■■□□□ 1.04
CLK1-211ENST00000481641 COL9A3Q14050 684 aaPredicted RBP21.55■■□□□ 1.04
CLK1-211ENST00000481641 ZFP91Q96JP5 570 aaPredicted RBP21.55■■□□□ 1.04
CLK1-211ENST00000481641 DDX41Q9UJV9 622 aaKnown RBP21.55■■□□□ 1.04
CLK1-211ENST00000481641 SCN5AQ14524 2016 aa21.55■■□□□ 1.04
CLK1-211ENST00000481641 TMEM265A0A087WTH1 108 aa21.54■■□□□ 1.04
CLK1-211ENST00000481641 SORBS3O60504 671 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms