RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 USP2O75604 605 aaPredicted RBP12.42□□□□□ -0.42
VTI1A-204ENST00000480057 PRR29P0C7W0 189 aa12.42□□□□□ -0.42
VTI1A-204ENST00000480057 ERCC5P28715 1186 aaPredicted RBP12.42□□□□□ -0.42
VTI1A-204ENST00000480057 SNAP25P60880 206 aa12.42□□□□□ -0.42
VTI1A-204ENST00000480057 MAP3K9P80192 1104 aa12.42□□□□□ -0.42
VTI1A-204ENST00000480057 CCDC174Q6PII3 467 aa12.42□□□□□ -0.42
VTI1A-204ENST00000480057 POTEHQ6S545 545 aa12.42□□□□□ -0.42
VTI1A-204ENST00000480057 CCDC84Q86UT8 332 aaPredicted RBP12.42□□□□□ -0.42
VTI1A-204ENST00000480057 KCTD17Q8N5Z5 321 aa12.42□□□□□ -0.42
VTI1A-204ENST00000480057 ERCC4Q92889 916 aaPredicted RBP12.42□□□□□ -0.42
VTI1A-204ENST00000480057 RPAP3Q9H6T3 665 aaPredicted RBP12.42□□□□□ -0.42
VTI1A-204ENST00000480057 KBTBD4Q9NVX7 518 aa12.42□□□□□ -0.42
VTI1A-204ENST00000480057 LRWD1Q9UFC0 647 aa12.42□□□□□ -0.42
VTI1A-204ENST00000480057 RBBP6Q7Z6E9 1792 aaKnown RBP12.42□□□□□ -0.42
VTI1A-204ENST00000480057 ZNF536O15090 1300 aa12.41□□□□□ -0.42
VTI1A-204ENST00000480057 KDM3AQ9Y4C1 1321 aa12.41□□□□□ -0.42
VTI1A-204ENST00000480057 IQCA1LA6NCM1 817 aa12.41□□□□□ -0.42
VTI1A-204ENST00000480057 GLTPD2A6NH11 291 aa12.41□□□□□ -0.42
VTI1A-204ENST00000480057 BIN1O00499 593 aa12.41□□□□□ -0.42
VTI1A-204ENST00000480057 ZBED4O75132 1171 aa12.41□□□□□ -0.42
VTI1A-204ENST00000480057 FLOT1O75955 427 aa12.41□□□□□ -0.42
VTI1A-204ENST00000480057 TPM3P06753 285 aa12.41□□□□□ -0.42
VTI1A-204ENST00000480057 CDC25BP30305 580 aa12.41□□□□□ -0.42
VTI1A-204ENST00000480057 NF2P35240 595 aa12.41□□□□□ -0.42
VTI1A-204ENST00000480057 TECP42680 631 aa12.41□□□□□ -0.42
VTI1A-204ENST00000480057 TXKP42681 527 aa12.41□□□□□ -0.42
VTI1A-204ENST00000480057 HSD17B4P51659 736 aa12.41□□□□□ -0.42
VTI1A-204ENST00000480057 AMPD3Q01432 767 aa12.41□□□□□ -0.42
VTI1A-204ENST00000480057 MYL5Q02045 173 aa12.41□□□□□ -0.42
VTI1A-204ENST00000480057 KCNB1Q14721 858 aa12.41□□□□□ -0.42
VTI1A-204ENST00000480057 KARSQ15046 597 aaKnown RBP12.41□□□□□ -0.42
VTI1A-204ENST00000480057 NAALADL2Q58DX5 795 aa12.41□□□□□ -0.42
VTI1A-204ENST00000480057 HYIQ5T013 277 aa12.41□□□□□ -0.42
VTI1A-204ENST00000480057 KRT79Q5XKE5 535 aa12.41□□□□□ -0.42
VTI1A-204ENST00000480057 RASSF8Q8NHQ8 419 aa12.41□□□□□ -0.42
VTI1A-204ENST00000480057 HAS1Q92839 578 aa12.41□□□□□ -0.42
VTI1A-204ENST00000480057 ZKSCAN4Q969J2 545 aaPredicted RBP12.41□□□□□ -0.42
VTI1A-204ENST00000480057 TANGO6Q9C0B7 1094 aa12.41□□□□□ -0.42
VTI1A-204ENST00000480057 LRRC27Q9C0I9 530 aa12.41□□□□□ -0.42
VTI1A-204ENST00000480057 TTC12Q9H892 705 aaPredicted RBP12.41□□□□□ -0.42
VTI1A-204ENST00000480057 FBXO28Q9NVF7 368 aa12.41□□□□□ -0.42
VTI1A-204ENST00000480057 TMOD4Q9NZQ9 345 aa12.41□□□□□ -0.42
VTI1A-204ENST00000480057 CCPG1Q9ULG6 757 aa12.41□□□□□ -0.42
VTI1A-204ENST00000480057 PCDHA12Q9UN75 941 aa12.41□□□□□ -0.42
VTI1A-204ENST00000480057 ADAMTS5Q9UNA0 930 aa12.41□□□□□ -0.42
VTI1A-204ENST00000480057 AFG3L2Q9Y4W6 797 aa12.41□□□□□ -0.42
VTI1A-204ENST00000480057 ZHX2Q9Y6X8 837 aa12.41□□□□□ -0.42
VTI1A-204ENST00000480057 WDR90Q96KV7 1748 aa12.4□□□□□ -0.42
VTI1A-204ENST00000480057 POLR2AP24928 1970 aaKnown RBP12.4□□□□□ -0.42
VTI1A-204ENST00000480057 ATP2A1O14983 1001 aa12.4□□□□□ -0.42
VTI1A-204ENST00000480057 MARCH6O60337 910 aa12.4□□□□□ -0.42
VTI1A-204ENST00000480057 PLCG1P19174 1290 aa12.4□□□□□ -0.42
VTI1A-204ENST00000480057 EPHX2P34913 555 aa12.4□□□□□ -0.42
VTI1A-204ENST00000480057 AFMP43652 599 aa12.4□□□□□ -0.42
VTI1A-204ENST00000480057 IREB2P48200 963 aaKnown RBP12.4□□□□□ -0.42
VTI1A-204ENST00000480057 TKFCQ3LXA3 575 aa12.4□□□□□ -0.42
VTI1A-204ENST00000480057 CNNM4Q6P4Q7 775 aa12.4□□□□□ -0.42
VTI1A-204ENST00000480057 PLA2G4DQ86XP0 818 aa12.4□□□□□ -0.42
VTI1A-204ENST00000480057 AOPEPQ8N6M6 819 aa12.4□□□□□ -0.42
VTI1A-204ENST00000480057 MRFAP1L1Q96HT8 127 aa12.4□□□□□ -0.42
VTI1A-204ENST00000480057 P2RX7Q99572 595 aaKnown RBP12.4□□□□□ -0.42
VTI1A-204ENST00000480057 MMTAG2Q9BU76 263 aaKnown RBP12.4□□□□□ -0.42
VTI1A-204ENST00000480057 NT5C3AQ9H0P0 336 aa12.4□□□□□ -0.42
VTI1A-204ENST00000480057 CTDP1Q9Y5B0 961 aaPredicted RBP12.4□□□□□ -0.42
VTI1A-204ENST00000480057 CSADQ9Y600 493 aa12.4□□□□□ -0.42
VTI1A-204ENST00000480057 SNCAIPQ9Y6H5 919 aa12.4□□□□□ -0.42
VTI1A-204ENST00000480057 FRMPD4Q14CM0 1322 aa12.39□□□□□ -0.43
VTI1A-204ENST00000480057 RPTORQ8N122 1335 aa12.39□□□□□ -0.43
VTI1A-204ENST00000480057 UNCXA6NJT0 531 aa12.39□□□□□ -0.43
VTI1A-204ENST00000480057 PP2D1A8MPX8 630 aa12.39□□□□□ -0.43
VTI1A-204ENST00000480057 GOLGA6L6A8MZA4 724 aa12.39□□□□□ -0.43
VTI1A-204ENST00000480057 VWA5AO00534 786 aa12.39□□□□□ -0.43
VTI1A-204ENST00000480057 AP5Z1O43299 807 aa12.39□□□□□ -0.43
VTI1A-204ENST00000480057 CFBP00751 764 aa12.39□□□□□ -0.43
VTI1A-204ENST00000480057 BMP6P22004 513 aa12.39□□□□□ -0.43
VTI1A-204ENST00000480057 DSG3P32926 999 aa12.39□□□□□ -0.43
VTI1A-204ENST00000480057 PPP1R2P41236 205 aa12.39□□□□□ -0.43
VTI1A-204ENST00000480057 ZNF75DP51815 510 aa12.39□□□□□ -0.43
VTI1A-204ENST00000480057 SETQ01105 290 aaPredicted RBP12.39□□□□□ -0.43
VTI1A-204ENST00000480057 COG2Q14746 738 aa12.39□□□□□ -0.43
VTI1A-204ENST00000480057 NCAPHQ15003 741 aa12.39□□□□□ -0.43
VTI1A-204ENST00000480057 GPR162Q16538 588 aa12.39□□□□□ -0.43
VTI1A-204ENST00000480057 TMEM119Q4V9L6 283 aa12.39□□□□□ -0.43
VTI1A-204ENST00000480057 PRAMEF18Q5VWM3 479 aa12.39□□□□□ -0.43
VTI1A-204ENST00000480057 HAUS3Q68CZ6 603 aa12.39□□□□□ -0.43
VTI1A-204ENST00000480057 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.39□□□□□ -0.43
VTI1A-204ENST00000480057 NIPA1Q7RTP0 329 aa12.39□□□□□ -0.43
VTI1A-204ENST00000480057 KRT26Q7Z3Y9 468 aa12.39□□□□□ -0.43
VTI1A-204ENST00000480057 GRAMD1CQ8IYS0 662 aa12.39□□□□□ -0.43
VTI1A-204ENST00000480057 ETNPPLQ8TBG4 499 aa12.39□□□□□ -0.43
VTI1A-204ENST00000480057 ENOX1Q8TC92 643 aaKnown RBP12.39□□□□□ -0.43
VTI1A-204ENST00000480057 CLEC4DQ8WXI8 215 aa12.39□□□□□ -0.43
VTI1A-204ENST00000480057 CCDC47Q96A33 483 aaKnown RBP12.39□□□□□ -0.43
VTI1A-204ENST00000480057 LENG9Q96B70 501 aa12.39□□□□□ -0.43
VTI1A-204ENST00000480057 MTRQ99707 1265 aa12.39□□□□□ -0.43
VTI1A-204ENST00000480057 C7orf25Q9BPX7 421 aa12.39□□□□□ -0.43
VTI1A-204ENST00000480057 RLFQ13129 1914 aa12.39□□□□□ -0.43
VTI1A-204ENST00000480057 OTOFQ9HC10 1997 aa12.38□□□□□ -0.43
VTI1A-204ENST00000480057 A0A087WWV3 80 aa12.38□□□□□ -0.43
VTI1A-204ENST00000480057 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms