RNA–Protein interactions for RNA: ENST00000479653.5

CCDC18-208, Transcript of coiled-coil domain containing 18, humanhuman

TSL 3

Gene CCDC18, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-208ENST00000479653 H0Y858 1186 aa13.32□□□□□ -0.28
CCDC18-208ENST00000479653 H3BNC9 293 aa13.32□□□□□ -0.28
CCDC18-208ENST00000479653 MBTPS2O43462 519 aa13.32□□□□□ -0.28
CCDC18-208ENST00000479653 NCK2O43639 380 aa13.32□□□□□ -0.28
CCDC18-208ENST00000479653 KPNA6O60684 536 aa13.32□□□□□ -0.28
CCDC18-208ENST00000479653 PARNO95453 639 aaKnown RBP13.32□□□□□ -0.28
CCDC18-208ENST00000479653 FDX1P10109 184 aa13.32□□□□□ -0.28
CCDC18-208ENST00000479653 BMP3P12645 472 aa13.32□□□□□ -0.28
CCDC18-208ENST00000479653 LTBRP36941 435 aa13.32□□□□□ -0.28
CCDC18-208ENST00000479653 TKFCQ3LXA3 575 aa13.32□□□□□ -0.28
CCDC18-208ENST00000479653 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.32□□□□□ -0.28
CCDC18-208ENST00000479653 MYOCDQ8IZQ8 938 aa13.32□□□□□ -0.28
CCDC18-208ENST00000479653 LRRC47Q8N1G4 583 aaKnown RBP13.32□□□□□ -0.28
CCDC18-208ENST00000479653 CLUAP1Q96AJ1 413 aa13.32□□□□□ -0.28
CCDC18-208ENST00000479653 BCL11AQ9H165 835 aa13.32□□□□□ -0.28
CCDC18-208ENST00000479653 TLR9Q9NR96 1032 aa13.32□□□□□ -0.28
CCDC18-208ENST00000479653 NOP58Q9Y2X3 529 aaKnown RBP13.32□□□□□ -0.28
CCDC18-208ENST00000479653 CXCL10P02778 98 aa13.31□□□□□ -0.28
CCDC18-208ENST00000479653 AMHP03971 560 aa13.31□□□□□ -0.28
CCDC18-208ENST00000479653 CT47B1P0C2W7 299 aaPredicted RBP13.31□□□□□ -0.28
CCDC18-208ENST00000479653 ID4P47928 161 aa13.31□□□□□ -0.28
CCDC18-208ENST00000479653 STAT2P52630 851 aa13.31□□□□□ -0.28
CCDC18-208ENST00000479653 SNAP25P60880 206 aa13.31□□□□□ -0.28
CCDC18-208ENST00000479653 ZXDAP98168 799 aa13.31□□□□□ -0.28
CCDC18-208ENST00000479653 MUM1L1Q5H9M0 696 aa13.31□□□□□ -0.28
CCDC18-208ENST00000479653 SLFN13Q68D06 897 aa13.31□□□□□ -0.28
CCDC18-208ENST00000479653 GDF6Q6KF10 455 aaPredicted RBP13.31□□□□□ -0.28
CCDC18-208ENST00000479653 ASCL5Q7RTU5 278 aa13.31□□□□□ -0.28
CCDC18-208ENST00000479653 FRAT1Q92837 279 aaPredicted RBP13.31□□□□□ -0.28
CCDC18-208ENST00000479653 SAMD11Q96NU1 681 aa13.31□□□□□ -0.28
CCDC18-208ENST00000479653 C1orf115Q9H7X2 142 aa13.31□□□□□ -0.28
CCDC18-208ENST00000479653 TNNQ9UQP3 1299 aa13.31□□□□□ -0.28
CCDC18-208ENST00000479653 TECTAO75443 2155 aa13.3□□□□□ -0.28
CCDC18-208ENST00000479653 IPO8O15397 1037 aaKnown RBP13.3□□□□□ -0.28
CCDC18-208ENST00000479653 CKBP12277 381 aa13.3□□□□□ -0.28
CCDC18-208ENST00000479653 RASA1P20936 1047 aa13.3□□□□□ -0.28
CCDC18-208ENST00000479653 RARSP54136 660 aaKnown RBP13.3□□□□□ -0.28
CCDC18-208ENST00000479653 VCPP55072 806 aaKnown RBP13.3□□□□□ -0.28
CCDC18-208ENST00000479653 DLX2Q07687 328 aaPredicted RBP13.3□□□□□ -0.28
CCDC18-208ENST00000479653 MKRN4PQ13434 485 aaPredicted RBP13.3□□□□□ -0.28
CCDC18-208ENST00000479653 COL19A1Q14993 1142 aa13.3□□□□□ -0.28
CCDC18-208ENST00000479653 PPP2R5BQ15173 497 aa13.3□□□□□ -0.28
CCDC18-208ENST00000479653 MORC4Q8TE76 937 aa13.3□□□□□ -0.28
CCDC18-208ENST00000479653 CHURC1Q8WUH1 139 aa13.3□□□□□ -0.28
CCDC18-208ENST00000479653 COPS5Q92905 334 aa13.3□□□□□ -0.28
CCDC18-208ENST00000479653 YME1L1Q96TA2 773 aa13.3□□□□□ -0.28
CCDC18-208ENST00000479653 IGFLR1Q9H665 355 aa13.3□□□□□ -0.28
CCDC18-208ENST00000479653 ADD3Q9UEY8 706 aaKnown RBP13.3□□□□□ -0.28
CCDC18-208ENST00000479653 TRPC6Q9Y210 931 aa13.3□□□□□ -0.28
CCDC18-208ENST00000479653 ZBED9Q6R2W3 1325 aa13.3□□□□□ -0.28
CCDC18-208ENST00000479653 CACNA1HO95180 2353 aa13.29□□□□□ -0.28
CCDC18-208ENST00000479653 A6NJR5 290 aa13.29□□□□□ -0.28
CCDC18-208ENST00000479653 MINDY4BA8MYZ0 360 aa13.29□□□□□ -0.28
CCDC18-208ENST00000479653 AVPR2P30518 371 aa13.29□□□□□ -0.28
CCDC18-208ENST00000479653 PDE4BQ07343 736 aa13.29□□□□□ -0.28
CCDC18-208ENST00000479653 BAATQ14032 418 aaPredicted RBP13.29□□□□□ -0.28
CCDC18-208ENST00000479653 RPAP2Q8IXW5 612 aaPredicted RBP13.29□□□□□ -0.28
CCDC18-208ENST00000479653 TMEM192Q8IY95 271 aa13.29□□□□□ -0.28
CCDC18-208ENST00000479653 ZNF444Q8N0Y2 327 aaPredicted RBP13.29□□□□□ -0.28
CCDC18-208ENST00000479653 TET1Q8NFU7 2136 aa13.29□□□□□ -0.28
CCDC18-208ENST00000479653 DHX38Q92620 1227 aaKnown RBP13.29□□□□□ -0.28
CCDC18-208ENST00000479653 MKL1Q969V6 931 aa13.29□□□□□ -0.28
CCDC18-208ENST00000479653 RIF1Q5UIP0 2472 aaKnown RBP13.28□□□□□ -0.28
CCDC18-208ENST00000479653 RBM47A0AV96 593 aaKnown RBP13.28□□□□□ -0.28
CCDC18-208ENST00000479653 NKRFO15226 690 aaKnown RBP eCLIP13.28□□□□□ -0.28
CCDC18-208ENST00000479653 KDM4AO75164 1064 aa13.28□□□□□ -0.28
CCDC18-208ENST00000479653 UPP2O95045 317 aa13.28□□□□□ -0.28
CCDC18-208ENST00000479653 CSPG5O95196 566 aa13.28□□□□□ -0.28
CCDC18-208ENST00000479653 TRIM27P14373 513 aa13.28□□□□□ -0.28
CCDC18-208ENST00000479653 ADD2P35612 726 aa13.28□□□□□ -0.28
CCDC18-208ENST00000479653 ALDH5A1P51649 535 aaPredicted RBP13.28□□□□□ -0.28
CCDC18-208ENST00000479653 HTRA4P83105 476 aaPredicted RBP13.28□□□□□ -0.28
CCDC18-208ENST00000479653 SMAD4Q13485 552 aaKnown RBP13.28□□□□□ -0.28
CCDC18-208ENST00000479653 CTC1Q2NKJ3 1217 aa13.28□□□□□ -0.28
CCDC18-208ENST00000479653 FAM160B2Q86V87 743 aa13.28□□□□□ -0.28
CCDC18-208ENST00000479653 FBXO11Q86XK2 927 aa13.28□□□□□ -0.28
CCDC18-208ENST00000479653 GMCL1P1Q8NEA9 526 aa13.28□□□□□ -0.28
CCDC18-208ENST00000479653 SP7Q8TDD2 431 aaPredicted RBP13.28□□□□□ -0.28
CCDC18-208ENST00000479653 STAG1Q8WVM7 1258 aa13.28□□□□□ -0.28
CCDC18-208ENST00000479653 CEP95Q96GE4 821 aa13.28□□□□□ -0.28
CCDC18-208ENST00000479653 CTAGE1Q96RT6 745 aa13.28□□□□□ -0.28
CCDC18-208ENST00000479653 FSD1Q9BTV5 496 aa13.28□□□□□ -0.28
CCDC18-208ENST00000479653 IL1RAPL2Q9NP60 686 aa13.28□□□□□ -0.28
CCDC18-208ENST00000479653 ALG13Q9NP73 1137 aaKnown RBP13.28□□□□□ -0.28
CCDC18-208ENST00000479653 ARPP21Q9UBL0 812 aaPredicted RBP13.28□□□□□ -0.28
CCDC18-208ENST00000479653 CD207Q9UJ71 328 aa13.28□□□□□ -0.28
CCDC18-208ENST00000479653 DMDP11532 3685 aa13.27□□□□□ -0.29
CCDC18-208ENST00000479653 LGR5O75473 907 aa13.27□□□□□ -0.29
CCDC18-208ENST00000479653 PRDM1O75626 825 aa13.27□□□□□ -0.29
CCDC18-208ENST00000479653 TTLL1O95922 423 aa13.27□□□□□ -0.29
CCDC18-208ENST00000479653 CHGBP05060 677 aa13.27□□□□□ -0.29
CCDC18-208ENST00000479653 TXNP10599 105 aaKnown RBP13.27□□□□□ -0.29
CCDC18-208ENST00000479653 SLC1A4P43007 532 aa13.27□□□□□ -0.29
CCDC18-208ENST00000479653 HYAL1Q12794 435 aa13.27□□□□□ -0.29
CCDC18-208ENST00000479653 C7orf31Q8N865 590 aa13.27□□□□□ -0.29
CCDC18-208ENST00000479653 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.27□□□□□ -0.294e-6■■□□□ 13.6
CCDC18-208ENST00000479653 MTMR4Q9NYA4 1195 aa13.27□□□□□ -0.29
CCDC18-208ENST00000479653 CCPG1Q9ULG6 757 aa13.27□□□□□ -0.29
CCDC18-208ENST00000479653 EXOC6BQ9Y2D4 811 aa13.27□□□□□ -0.29
CCDC18-208ENST00000479653 IGKV6D-41A0A0C4DH26 115 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms