RNA–Protein interactions for RNA: ENST00000479003.5

CHKB-208, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-208ENST00000479003 KCNJ12Q14500 433 aa30.88■■■□□ 2.53
CHKB-208ENST00000479003 ZNF446Q9NWS9 450 aa30.88■■■□□ 2.53
CHKB-208ENST00000479003 MRFAP1Q9Y605 127 aa30.88■■■□□ 2.53
CHKB-208ENST00000479003 PP2D1A8MPX8 630 aa30.87■■■□□ 2.53
CHKB-208ENST00000479003 UBA7P41226 1012 aa30.87■■■□□ 2.53
CHKB-208ENST00000479003 ADSSL1Q8N142 457 aa30.87■■■□□ 2.53
CHKB-208ENST00000479003 CCDC12Q8WUD4 166 aaPredicted RBP30.87■■■□□ 2.53
CHKB-208ENST00000479003 GTPBP4Q9BZE4 634 aaKnown RBP30.87■■■□□ 2.53
CHKB-208ENST00000479003 H7C1D1 291 aa30.86■■■□□ 2.53
CHKB-208ENST00000479003 RASA3Q14644 834 aa30.86■■■□□ 2.53
CHKB-208ENST00000479003 TMEM179Q6ZVK1 233 aa30.86■■■□□ 2.53
CHKB-208ENST00000479003 GPC2Q8N158 579 aa30.86■■■□□ 2.53
CHKB-208ENST00000479003 KBTBD4Q9NVX7 518 aa30.86■■■□□ 2.53
CHKB-208ENST00000479003 GH2P01242 217 aa30.86■■■□□ 2.53
CHKB-208ENST00000479003 EEF2P13639 858 aaKnown RBP30.86■■■□□ 2.53
CHKB-208ENST00000479003 SMARCA1P28370 1054 aa30.86■■■□□ 2.53
CHKB-208ENST00000479003 TRIM14Q14142 442 aa30.86■■■□□ 2.53
CHKB-208ENST00000479003 MIGA2Q7L4E1 593 aa30.86■■■□□ 2.53
CHKB-208ENST00000479003 KRT25Q7Z3Z0 450 aa30.86■■■□□ 2.53
CHKB-208ENST00000479003 KRT222Q8N1A0 295 aa30.86■■■□□ 2.53
CHKB-208ENST00000479003 VPS16Q9H269 839 aa30.86■■■□□ 2.53
CHKB-208ENST00000479003 KANSL2Q9H9L4 492 aa30.86■■■□□ 2.53
CHKB-208ENST00000479003 TAB2Q9NYJ8 693 aa30.86■■■□□ 2.53
CHKB-208ENST00000479003 FRMPD2Q68DX3 1309 aaPredicted RBP30.85■■■□□ 2.53
CHKB-208ENST00000479003 KLRC4O43908 158 aa30.85■■■□□ 2.53
CHKB-208ENST00000479003 CLCN6P51797 869 aa30.85■■■□□ 2.53
CHKB-208ENST00000479003 SIAH1Q8IUQ4 282 aa30.85■■■□□ 2.53
CHKB-208ENST00000479003 RNF181Q9P0P0 153 aa30.85■■■□□ 2.53
CHKB-208ENST00000479003 SNHG28P0DPA3 235 aa30.85■■■□□ 2.53
CHKB-208ENST00000479003 NAPAP54920 295 aa30.85■■■□□ 2.53
CHKB-208ENST00000479003 ICA1Q05084 483 aa30.85■■■□□ 2.53
CHKB-208ENST00000479003 GPRC5DQ9NZD1 345 aa30.85■■■□□ 2.53
CHKB-208ENST00000479003 HACL1Q9UJ83 578 aa30.85■■■□□ 2.53
CHKB-208ENST00000479003 RASSF8Q8NHQ8 419 aa30.84■■■□□ 2.53
CHKB-208ENST00000479003 AK8Q96MA6 479 aa30.84■■■□□ 2.53
CHKB-208ENST00000479003 MAPK8IP1Q9UQF2 711 aa30.84■■■□□ 2.53
CHKB-208ENST00000479003 TNNI2P48788 182 aa30.83■■■□□ 2.53
CHKB-208ENST00000479003 TMTC1Q8IUR5 882 aa30.83■■■□□ 2.53
CHKB-208ENST00000479003 TRPM4Q8TD43 1214 aa30.83■■■□□ 2.53
CHKB-208ENST00000479003 CUEDC2Q9H467 287 aa30.83■■■□□ 2.53
CHKB-208ENST00000479003 MAGEF1Q9HAY2 307 aa30.83■■■□□ 2.53
CHKB-208ENST00000479003 NYAP2Q9P242 653 aa30.83■■■□□ 2.53
CHKB-208ENST00000479003 RHOBTB3O94955 611 aa30.83■■■□□ 2.53
CHKB-208ENST00000479003 IRF2BP1Q8IU81 584 aa30.83■■■□□ 2.53
CHKB-208ENST00000479003 C6orf50Q9HD87 102 aa30.83■■■□□ 2.53
CHKB-208ENST00000479003 ABHD10Q9NUJ1 306 aa30.83■■■□□ 2.53
CHKB-208ENST00000479003 TNFAIP1Q13829 316 aa30.82■■■□□ 2.52
CHKB-208ENST00000479003 NONOQ15233 471 aaKnown RBP eCLIP30.82■■■□□ 2.52
CHKB-208ENST00000479003 RRP36Q96EU6 259 aaKnown RBP30.82■■■□□ 2.52
CHKB-208ENST00000479003 TEPSINQ96N21 525 aa30.82■■■□□ 2.52
CHKB-208ENST00000479003 OR52Z1P0C646 297 aa30.82■■■□□ 2.52
CHKB-208ENST00000479003 GNA11P29992 359 aa30.82■■■□□ 2.52
CHKB-208ENST00000479003 PPP2R3AQ06190 1150 aa30.82■■■□□ 2.52
CHKB-208ENST00000479003 ARGLU1Q9NWB6 273 aaPredicted RBP30.82■■■□□ 2.52
CHKB-208ENST00000479003 SMCO2A6NFE2 343 aa30.81■■■□□ 2.52
CHKB-208ENST00000479003 TBC1D12O60347 775 aa30.81■■■□□ 2.52
CHKB-208ENST00000479003 BMS1Q14692 1282 aaKnown RBP30.81■■■□□ 2.52
CHKB-208ENST00000479003 GIMAP8Q8ND71 665 aaPredicted RBP30.81■■■□□ 2.52
CHKB-208ENST00000479003 MKL1Q969V6 931 aa30.81■■■□□ 2.52
CHKB-208ENST00000479003 UBA5Q9GZZ9 404 aa30.81■■■□□ 2.52
CHKB-208ENST00000479003 LZTFL1Q9NQ48 299 aa30.81■■■□□ 2.52
CHKB-208ENST00000479003 EPS15P42566 896 aa30.8■■■□□ 2.52
CHKB-208ENST00000479003 LRRC15Q8TF66 581 aa30.8■■■□□ 2.52
CHKB-208ENST00000479003 IRX2Q9BZI1 471 aaPredicted RBP30.8■■■□□ 2.52
CHKB-208ENST00000479003 TRIM49BA6NDI0 452 aa30.8■■■□□ 2.52
CHKB-208ENST00000479003 DDNO94850 711 aaPredicted RBP30.8■■■□□ 2.52
CHKB-208ENST00000479003 GABPB1Q06547 395 aaPredicted RBP30.8■■■□□ 2.52
CHKB-208ENST00000479003 STIM1Q13586 685 aa30.8■■■□□ 2.52
CHKB-208ENST00000479003 ASPRV1Q53RT3 343 aa30.8■■■□□ 2.52
CHKB-208ENST00000479003 CABP7Q86V35 215 aa30.8■■■□□ 2.52
CHKB-208ENST00000479003 ERVK-24P63145 666 aa30.79■■■□□ 2.52
CHKB-208ENST00000479003 ZNF543Q08ER8 600 aa30.79■■■□□ 2.52
CHKB-208ENST00000479003 RSRC2Q7L4I2 434 aaKnown RBP30.79■■■□□ 2.52
CHKB-208ENST00000479003 THAP9Q9H5L6 903 aa30.79■■■□□ 2.52
CHKB-208ENST00000479003 SEC63Q9UGP8 760 aaKnown RBP30.79■■■□□ 2.52
CHKB-208ENST00000479003 RNF225M0QZC1 329 aaPredicted RBP30.79■■■□□ 2.52
CHKB-208ENST00000479003 KIF5CO60282 957 aa30.79■■■□□ 2.52
CHKB-208ENST00000479003 EEF1GP26641 437 aaKnown RBP30.79■■■□□ 2.52
CHKB-208ENST00000479003 NUP88Q99567 741 aaPredicted RBP30.79■■■□□ 2.52
CHKB-208ENST00000479003 GPCPD1Q9NPB8 672 aa30.79■■■□□ 2.52
CHKB-208ENST00000479003 A0A0U1RQJ8 604 aa30.78■■■□□ 2.52
CHKB-208ENST00000479003 RAD21O60216 631 aa30.78■■■□□ 2.52
CHKB-208ENST00000479003 CCNT1O60563 726 aaKnown RBP30.78■■■□□ 2.52
CHKB-208ENST00000479003 PMS1P54277 932 aaKnown RBP30.78■■■□□ 2.52
CHKB-208ENST00000479003 UBXN1Q04323 297 aa30.78■■■□□ 2.52
CHKB-208ENST00000479003 ORC2Q13416 577 aaPredicted RBP30.78■■■□□ 2.52
CHKB-208ENST00000479003 LETM2Q2VYF4 491 aa30.78■■■□□ 2.52
CHKB-208ENST00000479003 CYP26C1Q6V0L0 522 aa30.78■■■□□ 2.52
CHKB-208ENST00000479003 NEK8Q86SG6 692 aa30.78■■■□□ 2.52
CHKB-208ENST00000479003 ATRIPQ8WXE1 791 aa30.78■■■□□ 2.52
CHKB-208ENST00000479003 PLIN2Q99541 437 aa30.78■■■□□ 2.52
CHKB-208ENST00000479003 DEFB129Q9H1M3 183 aa30.78■■■□□ 2.52
CHKB-208ENST00000479003 FRMD4AQ9P2Q2 1039 aaPredicted RBP30.78■■■□□ 2.52
CHKB-208ENST00000479003 ESYT2A0FGR8 921 aa30.77■■■□□ 2.52
CHKB-208ENST00000479003 PSMA7O14818 248 aa30.77■■■□□ 2.52
CHKB-208ENST00000479003 PLCG1P19174 1290 aa30.77■■■□□ 2.52
CHKB-208ENST00000479003 MAP3K10Q02779 954 aa30.77■■■□□ 2.52
CHKB-208ENST00000479003 C9orf131Q5VYM1 1079 aa30.77■■■□□ 2.52
CHKB-208ENST00000479003 VAT1LQ9HCJ6 419 aa30.77■■■□□ 2.52
CHKB-208ENST00000479003 ANGEL2Q5VTE6 544 aaKnown RBP30.77■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms