RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 USP17L11C9JVI0 530 aa12.07□□□□□ -0.48
VPS52-217ENST00000478934 USP17L18D6R9N7 530 aa12.07□□□□□ -0.48
VPS52-217ENST00000478934 USP17L22D6RA61 530 aa12.07□□□□□ -0.48
VPS52-217ENST00000478934 USP17L17D6RBQ6 530 aa12.07□□□□□ -0.48
VPS52-217ENST00000478934 USP17L19D6RCP7 530 aa12.07□□□□□ -0.48
VPS52-217ENST00000478934 USP17L20D6RJB6 530 aa12.07□□□□□ -0.48
VPS52-217ENST00000478934 BBOX1O75936 387 aa12.07□□□□□ -0.48
VPS52-217ENST00000478934 ADCY7P51828 1080 aa12.07□□□□□ -0.48
VPS52-217ENST00000478934 AMPD2Q01433 879 aa12.07□□□□□ -0.48
VPS52-217ENST00000478934 USP17L24Q0WX57 530 aa12.07□□□□□ -0.48
VPS52-217ENST00000478934 TCP10Q12799 353 aa12.07□□□□□ -0.48
VPS52-217ENST00000478934 CCDC122Q5T0U0 273 aa12.07□□□□□ -0.48
VPS52-217ENST00000478934 MEX3CQ5U5Q3 659 aaKnown RBP12.07□□□□□ -0.48
VPS52-217ENST00000478934 USP17L6PQ6QN14 398 aa12.07□□□□□ -0.48
VPS52-217ENST00000478934 FAM163AQ96GL9 167 aaPredicted RBP12.07□□□□□ -0.48
VPS52-217ENST00000478934 AK8Q96MA6 479 aa12.07□□□□□ -0.48
VPS52-217ENST00000478934 FAM207AQ9NSI2 230 aaPredicted RBP12.07□□□□□ -0.48
VPS52-217ENST00000478934 TAF1LQ8IZX4 1826 aa12.06□□□□□ -0.48
VPS52-217ENST00000478934 MYH10P35580 1976 aa12.06□□□□□ -0.48
VPS52-217ENST00000478934 NPHP3-ACAD11A0A0J9YXS1 232 aa12.06□□□□□ -0.48
VPS52-217ENST00000478934 PPEF1O14829 653 aaPredicted RBP12.06□□□□□ -0.48
VPS52-217ENST00000478934 ZNF263O14978 683 aa12.06□□□□□ -0.48
VPS52-217ENST00000478934 ZNF185O15231 689 aa12.06□□□□□ -0.48
VPS52-217ENST00000478934 PLCG2P16885 1265 aa12.06□□□□□ -0.48
VPS52-217ENST00000478934 SHMT1P34896 483 aa12.06□□□□□ -0.48
VPS52-217ENST00000478934 DNM2P50570 870 aa12.06□□□□□ -0.48
VPS52-217ENST00000478934 MRPS25P82663 173 aaKnown RBP12.06□□□□□ -0.48
VPS52-217ENST00000478934 BEND6Q5SZJ8 279 aaPredicted RBP12.06□□□□□ -0.48
VPS52-217ENST00000478934 SV2BQ7L1I2 683 aa12.06□□□□□ -0.48
VPS52-217ENST00000478934 CALML4Q96GE6 196 aa12.06□□□□□ -0.48
VPS52-217ENST00000478934 UBXN6Q9BZV1 441 aa12.06□□□□□ -0.48
VPS52-217ENST00000478934 NHEJ1Q9H9Q4 299 aaPredicted RBP12.06□□□□□ -0.48
VPS52-217ENST00000478934 ZNF219Q9P2Y4 722 aaPredicted RBP12.06□□□□□ -0.48
VPS52-217ENST00000478934 MYO6Q9UM54 1294 aa12.06□□□□□ -0.48
VPS52-217ENST00000478934 A0A1W2PQC6 194 aa12.06□□□□□ -0.48
VPS52-217ENST00000478934 MACROD2A1Z1Q3 448 aa12.06□□□□□ -0.48
VPS52-217ENST00000478934 CCDC151A5D8V7 595 aa12.06□□□□□ -0.48
VPS52-217ENST00000478934 SSBP05455 408 aaKnown RBP eCLIP12.06□□□□□ -0.48
VPS52-217ENST00000478934 NOVP48745 357 aa12.06□□□□□ -0.48
VPS52-217ENST00000478934 APBA1Q02410 837 aa12.06□□□□□ -0.48
VPS52-217ENST00000478934 TRIM14Q14142 442 aa12.06□□□□□ -0.48
VPS52-217ENST00000478934 CCDC96Q2M329 555 aa12.06□□□□□ -0.48
VPS52-217ENST00000478934 GSPT2Q8IYD1 628 aaKnown RBP12.06□□□□□ -0.48
VPS52-217ENST00000478934 CEP112Q8N8E3 955 aa12.06□□□□□ -0.48
VPS52-217ENST00000478934 SNX29Q8TEQ0 813 aa12.06□□□□□ -0.48
VPS52-217ENST00000478934 HAS1Q92839 578 aa12.06□□□□□ -0.48
VPS52-217ENST00000478934 PODXL2Q9NZ53 605 aa12.06□□□□□ -0.48
VPS52-217ENST00000478934 VPS18Q9P253 973 aa12.06□□□□□ -0.48
VPS52-217ENST00000478934 CTAGE15A4D2H0 777 aa12.05□□□□□ -0.48
VPS52-217ENST00000478934 CTAGE8P0CG41 777 aa12.05□□□□□ -0.48
VPS52-217ENST00000478934 LMAN1P49257 510 aa12.05□□□□□ -0.48
VPS52-217ENST00000478934 CDC42EP5Q6NZY7 148 aa12.05□□□□□ -0.48
VPS52-217ENST00000478934 CTAGE6Q86UF2 777 aa12.05□□□□□ -0.48
VPS52-217ENST00000478934 CTAGE4Q8IX94 777 aa12.05□□□□□ -0.48
VPS52-217ENST00000478934 PROM2Q8N271 834 aa12.05□□□□□ -0.48
VPS52-217ENST00000478934 LARP4BQ92615 738 aaKnown RBP12.05□□□□□ -0.48
VPS52-217ENST00000478934 MMS19Q96T76 1030 aa12.05□□□□□ -0.48
VPS52-217ENST00000478934 POLD4Q9HCU8 107 aa12.05□□□□□ -0.48
VPS52-217ENST00000478934 NHSQ6T4R5 1651 aa12.05□□□□□ -0.48
VPS52-217ENST00000478934 UTRNP46939 3433 aa12.05□□□□□ -0.48
VPS52-217ENST00000478934 IGKV6D-41A0A0C4DH26 115 aa12.05□□□□□ -0.48
VPS52-217ENST00000478934 ZNF543Q08ER8 600 aa12.05□□□□□ -0.48
VPS52-217ENST00000478934 KIAA1328Q86T90 577 aa12.05□□□□□ -0.48
VPS52-217ENST00000478934 DDX12PQ92771 950 aa12.05□□□□□ -0.48
VPS52-217ENST00000478934 CDK5RAP3Q96JB5 506 aa12.05□□□□□ -0.48
VPS52-217ENST00000478934 DRC1Q96MC2 740 aa12.05□□□□□ -0.48
VPS52-217ENST00000478934 DBNDD1Q9H9R9 158 aa12.05□□□□□ -0.48
VPS52-217ENST00000478934 SERPINB13Q9UIV8 391 aa12.05□□□□□ -0.48
VPS52-217ENST00000478934 ADAM21Q9UKJ8 722 aa12.05□□□□□ -0.48
VPS52-217ENST00000478934 AFF2P51816 1311 aa12.04□□□□□ -0.48
VPS52-217ENST00000478934 MYL1P05976 194 aa12.04□□□□□ -0.48
VPS52-217ENST00000478934 HOXA10P31260 410 aaPredicted RBP12.04□□□□□ -0.48
VPS52-217ENST00000478934 STAT3P40763 770 aa12.04□□□□□ -0.48
VPS52-217ENST00000478934 TBC1D22AQ8WUA7 517 aa12.04□□□□□ -0.48
VPS52-217ENST00000478934 PSMB7Q99436 277 aa12.04□□□□□ -0.48
VPS52-217ENST00000478934 DNAJC18Q9H819 358 aa12.04□□□□□ -0.48
VPS52-217ENST00000478934 E9PMD0 336 aa12.04□□□□□ -0.48
VPS52-217ENST00000478934 TTLL1O95922 423 aa12.04□□□□□ -0.48
VPS52-217ENST00000478934 SNHG28P0DPA3 235 aa12.04□□□□□ -0.48
VPS52-217ENST00000478934 TSR1Q2NL82 804 aaKnown RBP12.04□□□□□ -0.48
VPS52-217ENST00000478934 CENPPQ6IPU0 288 aa12.04□□□□□ -0.48
VPS52-217ENST00000478934 APOBEC3HQ6NTF7 200 aaKnown RBP12.04□□□□□ -0.48
VPS52-217ENST00000478934 JAKMIP2Q96AA8 810 aa12.04□□□□□ -0.48
VPS52-217ENST00000478934 ZC3H12CQ9C0D7 883 aaKnown RBP12.04□□□□□ -0.48
VPS52-217ENST00000478934 CUEDC2Q9H467 287 aa12.04□□□□□ -0.48
VPS52-217ENST00000478934 MMRN2Q9H8L6 949 aa12.04□□□□□ -0.48
VPS52-217ENST00000478934 CCDC66A2RUB6 948 aa12.03□□□□□ -0.48
VPS52-217ENST00000478934 LRRIQ3A6PVS8 624 aaPredicted RBP12.03□□□□□ -0.48
VPS52-217ENST00000478934 MEA1Q16626 185 aa12.03□□□□□ -0.48
VPS52-217ENST00000478934 CNNM4Q6P4Q7 775 aa12.03□□□□□ -0.48
VPS52-217ENST00000478934 C2CD5Q86YS7 1000 aa12.03□□□□□ -0.48
VPS52-217ENST00000478934 KIAA0825Q8IV33 1275 aa12.03□□□□□ -0.48
VPS52-217ENST00000478934 ANKRD13CQ8N6S4 541 aa12.03□□□□□ -0.48
VPS52-217ENST00000478934 RAD54LQ92698 747 aa12.03□□□□□ -0.48
VPS52-217ENST00000478934 CCDC102AQ96A19 550 aa12.03□□□□□ -0.48
VPS52-217ENST00000478934 P2RX7Q99572 595 aaKnown RBP12.03□□□□□ -0.48
VPS52-217ENST00000478934 BCAS3Q9H6U6 928 aa12.03□□□□□ -0.48
VPS52-217ENST00000478934 MLXIPQ9HAP2 919 aa12.03□□□□□ -0.48
VPS52-217ENST00000478934 DDX25Q9UHL0 483 aaKnown RBP12.03□□□□□ -0.48
VPS52-217ENST00000478934 FAN1Q9Y2M0 1017 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms