RNA–Protein interactions for RNA: ENST00000474742.1

HDAC9-222, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-222ENST00000474742 C11orf21Q9P2W6 132 aa1.67□□□□□ -2.14
HDAC9-222ENST00000474742 NUDT5Q9UKK9 219 aa1.67□□□□□ -2.14
HDAC9-222ENST00000474742 ZNF214Q9UL59 606 aaPredicted RBP1.67□□□□□ -2.14
HDAC9-222ENST00000474742 TSC22D4Q9Y3Q8 395 aa1.67□□□□□ -2.14
HDAC9-222ENST00000474742 ZNF451Q9Y4E5 1061 aa1.67□□□□□ -2.14
HDAC9-222ENST00000474742 PCDHB12Q9Y5F1 795 aa1.67□□□□□ -2.14
HDAC9-222ENST00000474742 HCFC2Q9Y5Z7 792 aa1.67□□□□□ -2.14
HDAC9-222ENST00000474742 MRVI1Q9Y6F6 885 aa1.67□□□□□ -2.14
HDAC9-222ENST00000474742 MROH6A6NGR9 719 aa1.66□□□□□ -2.14
HDAC9-222ENST00000474742 B2RBV5 119 aa1.66□□□□□ -2.14
HDAC9-222ENST00000474742 H0Y8X5 98 aa1.66□□□□□ -2.14
HDAC9-222ENST00000474742 ARNTLO00327 626 aa1.66□□□□□ -2.14
HDAC9-222ENST00000474742 SRGAP3O43295 1099 aa1.66□□□□□ -2.14
HDAC9-222ENST00000474742 TBC1D8O95759 1140 aa1.66□□□□□ -2.14
HDAC9-222ENST00000474742 CAPNS1P04632 268 aa1.66□□□□□ -2.14
HDAC9-222ENST00000474742 CYP1A1P04798 512 aaPredicted RBP1.66□□□□□ -2.14
HDAC9-222ENST00000474742 ASGR2P07307 311 aa1.66□□□□□ -2.14
HDAC9-222ENST00000474742 DBHP09172 617 aa1.66□□□□□ -2.14
HDAC9-222ENST00000474742 FGRP09769 529 aa1.66□□□□□ -2.14
HDAC9-222ENST00000474742 CYP2C8P10632 490 aa1.66□□□□□ -2.14
HDAC9-222ENST00000474742 CD247P20963 164 aa1.66□□□□□ -2.14
HDAC9-222ENST00000474742 FBLN1P23142 703 aa1.66□□□□□ -2.14
HDAC9-222ENST00000474742 PMLP29590 882 aa1.66□□□□□ -2.14
HDAC9-222ENST00000474742 BMP8BP34820 402 aa1.66□□□□□ -2.14
HDAC9-222ENST00000474742 ACVRL1P37023 503 aa1.66□□□□□ -2.14
HDAC9-222ENST00000474742 CASP7P55210 303 aa1.66□□□□□ -2.14
HDAC9-222ENST00000474742 EIF6P56537 245 aaKnown RBP1.66□□□□□ -2.14
HDAC9-222ENST00000474742 COL9A2Q14055 689 aaPredicted RBP1.66□□□□□ -2.14
HDAC9-222ENST00000474742 SURF1Q15526 300 aa1.66□□□□□ -2.14
HDAC9-222ENST00000474742 LRRFIP1Q32MZ4 808 aaKnown RBP1.66□□□□□ -2.14
HDAC9-222ENST00000474742 ANKRD39Q53RE8 183 aa1.66□□□□□ -2.14
HDAC9-222ENST00000474742 FBXW10Q5XX13 1052 aa1.66□□□□□ -2.14
HDAC9-222ENST00000474742 MCTP2Q6DN12 878 aa1.66□□□□□ -2.14
HDAC9-222ENST00000474742 MRM1Q6IN84 353 aaKnown RBP1.66□□□□□ -2.14
HDAC9-222ENST00000474742 ZNF585AQ6P3V2 769 aa1.66□□□□□ -2.14
HDAC9-222ENST00000474742 CRIP3Q6Q6R5 217 aa1.66□□□□□ -2.14
HDAC9-222ENST00000474742 CRTC3Q6UUV7 619 aa1.66□□□□□ -2.14
HDAC9-222ENST00000474742 PLEKHH3Q7Z736 793 aa1.66□□□□□ -2.14
HDAC9-222ENST00000474742 CIR1Q86X95 450 aaPredicted RBP1.66□□□□□ -2.14
HDAC9-222ENST00000474742 ZNF761Q86XN6 746 aaPredicted RBP1.66□□□□□ -2.14
HDAC9-222ENST00000474742 C7orf61Q8IZ16 206 aa1.66□□□□□ -2.14
HDAC9-222ENST00000474742 ADAMTS17Q8TE56 1095 aa1.66□□□□□ -2.14
HDAC9-222ENST00000474742 BRF1Q92994 677 aa1.66□□□□□ -2.14
HDAC9-222ENST00000474742 DDX11Q96FC9 970 aa1.66□□□□□ -2.14
HDAC9-222ENST00000474742 SEC16BQ96JE7 1060 aa1.66□□□□□ -2.14
HDAC9-222ENST00000474742 RBM15Q96T37 977 aaKnown RBP eCLIP1.66□□□□□ -2.14
HDAC9-222ENST00000474742 C1QTNF3Q9BXJ4 246 aa1.66□□□□□ -2.14
HDAC9-222ENST00000474742 SRRTQ9BXP5 876 aaKnown RBP1.66□□□□□ -2.14
HDAC9-222ENST00000474742 KLC2Q9H0B6 622 aa1.66□□□□□ -2.14
HDAC9-222ENST00000474742 KLHL25Q9H0H3 589 aa1.66□□□□□ -2.14
HDAC9-222ENST00000474742 CSRNP2Q9H175 543 aa1.66□□□□□ -2.14
HDAC9-222ENST00000474742 BCAS3Q9H6U6 928 aa1.66□□□□□ -2.14
HDAC9-222ENST00000474742 WDR26Q9H7D7 661 aa1.66□□□□□ -2.14
HDAC9-222ENST00000474742 RXFP1Q9HBX9 757 aa1.66□□□□□ -2.14
HDAC9-222ENST00000474742 GP6Q9HCN6 339 aa1.66□□□□□ -2.14
HDAC9-222ENST00000474742 APEX2Q9UBZ4 518 aa1.66□□□□□ -2.14
HDAC9-222ENST00000474742 INPP5FQ9Y2H2 1132 aa1.66□□□□□ -2.14
HDAC9-222ENST00000474742 TCAF1Q9Y4C2 921 aa1.66□□□□□ -2.14
HDAC9-222ENST00000474742 SMAD7O15105 426 aaKnown RBP1.65□□□□□ -2.15
HDAC9-222ENST00000474742 TBX1O43435 398 aa1.65□□□□□ -2.15
HDAC9-222ENST00000474742 LAMTOR5O43504 91 aa1.65□□□□□ -2.15
HDAC9-222ENST00000474742 PPP1R11O60927 126 aaPredicted RBP1.65□□□□□ -2.15
HDAC9-222ENST00000474742 VAMP4O75379 141 aa1.65□□□□□ -2.15
HDAC9-222ENST00000474742 ZNF205O95201 554 aa1.65□□□□□ -2.15
HDAC9-222ENST00000474742 GSNP06396 782 aa1.65□□□□□ -2.15
HDAC9-222ENST00000474742 EPHX1P07099 455 aa1.65□□□□□ -2.15
HDAC9-222ENST00000474742 IMPDH2P12268 514 aa1.65□□□□□ -2.15
HDAC9-222ENST00000474742 IFNGR1P15260 489 aa1.65□□□□□ -2.15
HDAC9-222ENST00000474742 L1CAMP32004 1257 aa1.65□□□□□ -2.15
HDAC9-222ENST00000474742 NOP2P46087 812 aaKnown RBP1.65□□□□□ -2.15
HDAC9-222ENST00000474742 HTRA3P83110 453 aa1.65□□□□□ -2.15
HDAC9-222ENST00000474742 KLF10Q13118 480 aa1.65□□□□□ -2.15
HDAC9-222ENST00000474742 SLC9A5Q14940 896 aa1.65□□□□□ -2.15
HDAC9-222ENST00000474742 HS1BP3Q53T59 392 aa1.65□□□□□ -2.15
HDAC9-222ENST00000474742 PRAMEF18Q5VWM3 479 aa1.65□□□□□ -2.15
HDAC9-222ENST00000474742 CYP2R1Q6VVX0 501 aa1.65□□□□□ -2.15
HDAC9-222ENST00000474742 CCDC144CPQ8IYA2 1237 aa1.65□□□□□ -2.15
HDAC9-222ENST00000474742 Q8N1X5 172 aa1.65□□□□□ -2.15
HDAC9-222ENST00000474742 CELF2-AS1Q8N7Q2 184 aa1.65□□□□□ -2.15
HDAC9-222ENST00000474742 C19orf47Q8N9M1 422 aaKnown RBP1.65□□□□□ -2.15
HDAC9-222ENST00000474742 ANAPC16Q96DE5 110 aa1.65□□□□□ -2.15
HDAC9-222ENST00000474742 PEX11GQ96HA9 241 aa1.65□□□□□ -2.15
HDAC9-222ENST00000474742 LCORQ96JN0 433 aaPredicted RBP1.65□□□□□ -2.15
HDAC9-222ENST00000474742 FGD4Q96M96 766 aa1.65□□□□□ -2.15
HDAC9-222ENST00000474742 FCRL3Q96P31 734 aaPredicted RBP1.65□□□□□ -2.15
HDAC9-222ENST00000474742 NOX5Q96PH1 765 aa1.65□□□□□ -2.15
HDAC9-222ENST00000474742 GMLQ99445 158 aa1.65□□□□□ -2.15
HDAC9-222ENST00000474742 HAUS7Q99871 368 aa1.65□□□□□ -2.15
HDAC9-222ENST00000474742 YIPF4Q9BSR8 244 aa1.65□□□□□ -2.15
HDAC9-222ENST00000474742 SLC12A9Q9BXP2 914 aa1.65□□□□□ -2.15
HDAC9-222ENST00000474742 PCED1AQ9H1Q7 454 aa1.65□□□□□ -2.15
HDAC9-222ENST00000474742 CCSER2Q9H7U1 834 aa1.65□□□□□ -2.15
HDAC9-222ENST00000474742 ZNF408Q9H9D4 720 aa1.65□□□□□ -2.15
HDAC9-222ENST00000474742 CAPN10Q9HC96 672 aa1.65□□□□□ -2.15
HDAC9-222ENST00000474742 FBLN5Q9UBX5 448 aa1.65□□□□□ -2.15
HDAC9-222ENST00000474742 PLA2G2DQ9UNK4 145 aa1.65□□□□□ -2.15
HDAC9-222ENST00000474742 WDR33Q9C0J8 1336 aaKnown RBP1.65□□□□□ -2.15
HDAC9-222ENST00000474742 DDX3XO00571 662 aaKnown RBP eCLIP1.64□□□□□ -2.15
HDAC9-222ENST00000474742 MUSKO15146 869 aa1.64□□□□□ -2.15
HDAC9-222ENST00000474742 FGF10O15520 208 aaPredicted RBP1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms