RNA–Protein interactions for RNA: ENST00000471697.1

SCN3A-207, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 4

Gene SCN3A, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-207ENST00000471697 ALDH1L2Q3SY69 923 aa4.03□□□□□ -1.76
SCN3A-207ENST00000471697 TBC1D10BQ4KMP7 808 aaPredicted RBP4.03□□□□□ -1.76
SCN3A-207ENST00000471697 DACT2Q5SW24 774 aa4.03□□□□□ -1.76
SCN3A-207ENST00000471697 ANO1Q5XXA6 986 aa4.03□□□□□ -1.76
SCN3A-207ENST00000471697 WWC2Q6AWC2 1192 aa4.03□□□□□ -1.76
SCN3A-207ENST00000471697 CXorf57Q6NSI4 855 aaKnown RBP4.03□□□□□ -1.76
SCN3A-207ENST00000471697 SPATC1Q76KD6 591 aa4.03□□□□□ -1.76
SCN3A-207ENST00000471697 THAP5Q7Z6K1 395 aa4.03□□□□□ -1.76
SCN3A-207ENST00000471697 ZNF354CQ86Y25 554 aa4.03□□□□□ -1.76
SCN3A-207ENST00000471697 SLITRK4Q8IW52 837 aa4.03□□□□□ -1.76
SCN3A-207ENST00000471697 RNF214Q8ND24 703 aa4.03□□□□□ -1.76
SCN3A-207ENST00000471697 RIN3Q8TB24 985 aa4.03□□□□□ -1.76
SCN3A-207ENST00000471697 MYLIPQ8WY64 445 aa4.03□□□□□ -1.76
SCN3A-207ENST00000471697 SKA1Q96BD8 255 aa4.03□□□□□ -1.76
SCN3A-207ENST00000471697 CHMP4CQ96CF2 233 aa4.03□□□□□ -1.76
SCN3A-207ENST00000471697 MPP4Q96JB8 637 aa4.03□□□□□ -1.76
SCN3A-207ENST00000471697 HSPA12BQ96MM6 686 aa4.03□□□□□ -1.76
SCN3A-207ENST00000471697 TEPSINQ96N21 525 aa4.03□□□□□ -1.76
SCN3A-207ENST00000471697 GPR101Q96P66 508 aaPredicted RBP4.03□□□□□ -1.76
SCN3A-207ENST00000471697 SERINC2Q96SA4 455 aa4.03□□□□□ -1.76
SCN3A-207ENST00000471697 PUF60Q9UHX1 559 aaKnown RBP4.03□□□□□ -1.76
SCN3A-207ENST00000471697 ZMYM5Q9UJ78 669 aa4.03□□□□□ -1.76
SCN3A-207ENST00000471697 NOB1Q9ULX3 412 aaKnown RBP4.03□□□□□ -1.76
SCN3A-207ENST00000471697 SPEF1Q9Y4P9 236 aa4.03□□□□□ -1.76
SCN3A-207ENST00000471697 IPPQ9Y573 584 aa4.03□□□□□ -1.76
SCN3A-207ENST00000471697 KCTD3Q9Y597 815 aa4.03□□□□□ -1.76
SCN3A-207ENST00000471697 CTDP1Q9Y5B0 961 aaPredicted RBP4.03□□□□□ -1.76
SCN3A-207ENST00000471697 TEX51A0A1B0GUA7 166 aa4.02□□□□□ -1.77
SCN3A-207ENST00000471697 MYOCOSA0A1B0GUC4 107 aa4.02□□□□□ -1.77
SCN3A-207ENST00000471697 IRS4O14654 1257 aaPredicted RBP4.02□□□□□ -1.77
SCN3A-207ENST00000471697 PIP5K1CO60331 668 aa4.02□□□□□ -1.77
SCN3A-207ENST00000471697 ABLIM3O94929 683 aa4.02□□□□□ -1.77
SCN3A-207ENST00000471697 FAM200BP0CF97 657 aa4.02□□□□□ -1.77
SCN3A-207ENST00000471697 CPEP16870 476 aa4.02□□□□□ -1.77
SCN3A-207ENST00000471697 RRM1P23921 792 aa4.02□□□□□ -1.77
SCN3A-207ENST00000471697 POLD1P28340 1107 aa4.02□□□□□ -1.77
SCN3A-207ENST00000471697 SERPINB3P29508 390 aa4.02□□□□□ -1.77
SCN3A-207ENST00000471697 EIF6P56537 245 aaKnown RBP4.02□□□□□ -1.77
SCN3A-207ENST00000471697 GEMIN4P57678 1058 aaKnown RBP4.02□□□□□ -1.77
SCN3A-207ENST00000471697 PABPC4Q13310 644 aaKnown RBP eCLIP4.02□□□□□ -1.77
SCN3A-207ENST00000471697 MTMR1Q13613 665 aa4.02□□□□□ -1.77
SCN3A-207ENST00000471697 PUM3Q15397 648 aaKnown RBP4.02□□□□□ -1.77
SCN3A-207ENST00000471697 CDC37Q16543 378 aaPredicted RBP4.02□□□□□ -1.77
SCN3A-207ENST00000471697 ZC3H12AQ5D1E8 599 aaKnown RBP4.02□□□□□ -1.77
SCN3A-207ENST00000471697 RPS26P11Q5JNZ5 115 aaPredicted RBP4.02□□□□□ -1.77
SCN3A-207ENST00000471697 PPP4R3AQ6IN85 833 aa4.02□□□□□ -1.77
SCN3A-207ENST00000471697 CASC1Q6TDU7 716 aa4.02□□□□□ -1.77
SCN3A-207ENST00000471697 NXPE4Q6UWF7 544 aa4.02□□□□□ -1.77
SCN3A-207ENST00000471697 MMS22LQ6ZRQ5 1243 aa4.02□□□□□ -1.77
SCN3A-207ENST00000471697 TTC6Q86TZ1 520 aa4.02□□□□□ -1.77
SCN3A-207ENST00000471697 IFNL2Q8IZJ0 200 aa4.02□□□□□ -1.77
SCN3A-207ENST00000471697 ST13P5Q8NFI4 369 aaPredicted RBP4.02□□□□□ -1.77
SCN3A-207ENST00000471697 ANKRD24Q8TF21 1146 aa4.02□□□□□ -1.77
SCN3A-207ENST00000471697 ANP32BQ92688 251 aaKnown RBP4.02□□□□□ -1.77
SCN3A-207ENST00000471697 NKD1Q969G9 470 aa4.02□□□□□ -1.77
SCN3A-207ENST00000471697 ELAC2Q9BQ52 826 aaKnown RBP4.02□□□□□ -1.77
SCN3A-207ENST00000471697 CSRNP2Q9H175 543 aa4.02□□□□□ -1.77
SCN3A-207ENST00000471697 ALDH8A1Q9H2A2 487 aaPredicted RBP4.02□□□□□ -1.77
SCN3A-207ENST00000471697 RETREG1Q9H6L5 497 aa4.02□□□□□ -1.77
SCN3A-207ENST00000471697 GCM1Q9NP62 436 aa4.02□□□□□ -1.77
SCN3A-207ENST00000471697 PRDM11Q9NQV5 511 aa4.02□□□□□ -1.77
SCN3A-207ENST00000471697 AASDHPPTQ9NRN7 309 aa4.02□□□□□ -1.77
SCN3A-207ENST00000471697 SLC5A4Q9NY91 659 aa4.02□□□□□ -1.77
SCN3A-207ENST00000471697 PFDN2Q9UHV9 154 aa4.02□□□□□ -1.77
SCN3A-207ENST00000471697 ZNF180Q9UJW8 692 aa4.02□□□□□ -1.77
SCN3A-207ENST00000471697 RABGAP1Q9Y3P9 1069 aa4.02□□□□□ -1.77
SCN3A-207ENST00000471697 SUPT16HQ9Y5B9 1047 aaKnown RBP4.02□□□□□ -1.77
SCN3A-207ENST00000471697 DNAJC25-GNG10A0A024R161 153 aa4.01□□□□□ -1.77
SCN3A-207ENST00000471697 RASSF10A6NK89 507 aa4.01□□□□□ -1.77
SCN3A-207ENST00000471697 PRSS47A8MTI9 375 aa4.01□□□□□ -1.77
SCN3A-207ENST00000471697 CBFA2T2O43439 604 aa4.01□□□□□ -1.77
SCN3A-207ENST00000471697 ORC4O43929 436 aa4.01□□□□□ -1.77
SCN3A-207ENST00000471697 TRIM37O94972 964 aa4.01□□□□□ -1.77
SCN3A-207ENST00000471697 GSTP1P09211 210 aaKnown RBP4.01□□□□□ -1.77
SCN3A-207ENST00000471697 U2AF1L5P0DN76 240 aaPredicted RBP4.01□□□□□ -1.77
SCN3A-207ENST00000471697 RLBP1P12271 317 aa4.01□□□□□ -1.77
SCN3A-207ENST00000471697 INSRRP14616 1297 aa4.01□□□□□ -1.77
SCN3A-207ENST00000471697 ZSCAN20P17040 1043 aaPredicted RBP4.01□□□□□ -1.77
SCN3A-207ENST00000471697 EIF5P55010 431 aaKnown RBP4.01□□□□□ -1.77
SCN3A-207ENST00000471697 FCGRTP55899 365 aa4.01□□□□□ -1.77
SCN3A-207ENST00000471697 U2AF1Q01081 240 aaKnown RBP eCLIP4.01□□□□□ -1.77
SCN3A-207ENST00000471697 SSRP1Q08945 709 aaKnown RBP4.01□□□□□ -1.77
SCN3A-207ENST00000471697 SEPT6Q14141 434 aa4.01□□□□□ -1.77
SCN3A-207ENST00000471697 PUM1Q14671 1186 aaKnown RBP eCLIP4.01□□□□□ -1.77
SCN3A-207ENST00000471697 ZC3H12BQ5HYM0 836 aaKnown RBP4.01□□□□□ -1.77
SCN3A-207ENST00000471697 PRPF40BQ6NWY9 871 aaKnown RBP4.01□□□□□ -1.77
SCN3A-207ENST00000471697 MZT2AQ6P582 158 aa4.01□□□□□ -1.77
SCN3A-207ENST00000471697 CFAP161Q6P656 301 aa4.01□□□□□ -1.77
SCN3A-207ENST00000471697 LVRNQ6Q4G3 990 aa4.01□□□□□ -1.77
SCN3A-207ENST00000471697 DDX46Q7L014 1031 aaKnown RBP4.01□□□□□ -1.77
SCN3A-207ENST00000471697 STRA8Q7Z7C7 330 aa4.01□□□□□ -1.77
SCN3A-207ENST00000471697 ZSCAN30Q86W11 494 aa4.01□□□□□ -1.77
SCN3A-207ENST00000471697 CLASRPQ8N2M8 674 aaKnown RBP4.01□□□□□ -1.77
SCN3A-207ENST00000471697 OR6P1Q8NGX9 317 aa4.01□□□□□ -1.77
SCN3A-207ENST00000471697 ZNF622Q969S3 477 aaKnown RBP eCLIP4.01□□□□□ -1.77
SCN3A-207ENST00000471697 TRIM44Q96DX7 344 aaPredicted RBP4.01□□□□□ -1.77
SCN3A-207ENST00000471697 RHOVQ96L33 236 aa4.01□□□□□ -1.77
SCN3A-207ENST00000471697 BCO2Q9BYV7 579 aa4.01□□□□□ -1.77
SCN3A-207ENST00000471697 RHOBTB2Q9BYZ6 727 aa4.01□□□□□ -1.77
SCN3A-207ENST00000471697 LRRC27Q9C0I9 530 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms